Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 5.7e-57 224.6 163 100.0
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 1.5e-54 216.5 163 98.2
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 2.6e-49 199.1 163 90.2
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.5e-41 173.3 163 80.4
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 9.7e-41 170.6 163 79.1
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 3.6e-35 152.1 163 69.3
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 2.0e-33 146.4 132 88.6
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 7.5e-33 144.4 150 77.3
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 1.2e-27 127.1 165 64.8
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 4.1e-23 112.1 163 61.3
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 2.0e-22 109.8 147 67.3
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 2.7e-22 109.4 127 70.9
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 5.9e-22 108.2 164 62.8
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 5.9e-22 108.2 163 63.8
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 2.9e-21 105.9 168 64.3
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 3.9e-21 105.5 154 63.6
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 3.9e-21 105.5 154 63.6
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 3.9e-21 105.5 128 73.4
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 3.9e-21 105.5 128 73.4
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 5.0e-21 105.1 128 70.3
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 8.6e-21 104.4 170 57.6
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 1.5e-20 103.6 149 67.1
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 1.9e-20 103.2 146 67.8
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 2.5e-20 102.8 128 64.1
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 3.3e-20 102.4 151 68.9
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 3.3e-20 102.4 170 62.9
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 9.5e-20 100.9 147 66.7
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 9.5e-20 100.9 168 62.5
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 1.2e-19 100.5 162 62.3
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 1.6e-19 100.1 139 71.2
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 2.1e-19 99.8 165 64.2
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 4.7e-19 98.6 154 54.5
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 4.7e-19 98.6 163 60.7
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 6.1e-19 98.2 139 65.5
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 6.1e-19 98.2 158 63.9
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 6.1e-19 98.2 149 67.1
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.0e-18 97.4 154 56.5
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 1.0e-18 97.4 128 66.4
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 1.4e-18 97.1 156 64.1
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 1.4e-18 97.1 132 69.7
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 1.8e-18 96.7 169 59.8
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 3.1e-18 95.9 125 63.2
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 4.0e-18 95.5 166 62.7
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 5.2e-18 95.1 168 61.9
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 6.8e-18 94.7 139 66.2
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 8.9e-18 94.4 156 63.5
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 1.2e-17 94.0 156 62.8
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.5e-17 93.6 138 68.8
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 2.0e-17 93.2 138 68.8
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 2.0e-17 93.2 151 60.3
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 2.0e-17 93.2 139 66.2
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 2.6e-17 92.8 156 60.9
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 2.6e-17 92.8 171 60.8
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 4.4e-17 92.0 156 60.9
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 4.4e-17 92.0 156 60.9
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 4.4e-17 92.0 161 62.1
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 5.8e-17 91.7 150 62.0
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 5.8e-17 91.7 122 73.8
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 5.8e-17 91.7 145 65.5
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 5.8e-17 91.7 138 55.8
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 7.5e-17 91.3 166 61.4
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 7.5e-17 91.3 169 53.8
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 7.5e-17 91.3 154 56.5
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 9.8e-17 90.9 153 62.1
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 9.8e-17 90.9 151 62.3
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 1.7e-16 90.1 162 52.5
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 2.9e-16 89.4 167 59.3
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 2.9e-16 89.4 156 57.7
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 3.7e-16 89.0 171 53.2
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.3e-16 87.8 132 68.2
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.3e-16 87.8 132 68.2
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 1.1e-15 87.4 169 53.8
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.1e-15 87.4 128 60.9
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 1.1e-15 87.4 156 64.7
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 1.9e-15 86.7 127 66.9
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.4e-15 86.3 138 64.5
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.1e-15 85.5 138 60.9
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.1e-15 85.5 138 60.9
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 5.4e-15 85.1 164 61.0
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 7.0e-15 84.7 134 64.9
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 9.2e-15 84.3 138 60.1
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 9.2e-15 84.3 132 67.4
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 9.2e-15 84.3 157 56.7
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 1.6e-14 83.6 215 49.3
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.5e-14 82.4 145 54.5
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 3.5e-14 82.4 138 64.5
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 4.6e-14 82.0 162 47.5
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 6.0e-14 81.6 135 43.7
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 5.0e-13 78.6 109 71.6
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 8.6e-13 77.8 152 47.4
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 1.1e-12 77.4 147 56.5
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.6e-11 73.6 102 70.6
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 1.1e-10 70.9 171 54.4
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 1.8e-10 70.1 115 64.3
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 5.2e-10 68.6 162 55.6
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 1.2e-09 67.4 160 53.1
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 7.5e-09 64.7 154 42.9
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 9.8e-09 64.3 160 46.2
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 1.7e-08 63.5 130 55.4
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 3.2e-07 59.3 125 46.4


User provided reference genes

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