Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g090080.1 Solanum lycopersicum HOM05D007587 ORTHO05D009657 7.5e-42 173.3 81 100.0
Nitab4.5_0005594g0030 Nicotiana tabacum HOM05D007587 ORTHO05D009657 6.6e-22 107.1 67 70.1
Dinv39924 Davidia involucrata HOM05D007587 ORTHO05D009657 4.7e-20 100.9 71 60.6
ECA238G1538 Erigeron canadensis HOM05D003002 ORTHO05D002276 8.0e-20 100.1 48 81.2
Migut.H00502 Erythranthe guttata HOM05D007587 ORTHO05D009657 8.9e-19 96.7 54 66.7
FAN28G1310 Fragaria x ananassa HOM05D007587 ORTHO05D009657 1.2e-18 96.3 56 66.1
Thecc.01G045600 Theobroma cacao HOM05D007587 ORTHO05D009657 1.2e-18 96.3 54 68.5
Lj7C15T6 Lonicera japonica HOM05D007587 ORTHO05D009657 1.5e-18 95.9 71 57.7
Gohir.A11G188150 Gossypium hirsutum HOM05D007587 ORTHO05D009657 2.0e-18 95.5 74 59.5
Gohir.D11G194650 Gossypium hirsutum HOM05D007587 ORTHO05D009657 2.0e-18 95.5 74 59.5
Gorai.007G208100 Gossypium raimondii HOM05D007587 ORTHO05D009657 2.0e-18 95.5 74 59.5
Manes.12G097400 Manihot esculenta HOM05D007587 ORTHO05D009657 3.4e-18 94.7 52 69.2
Prupe.7G145500 Prunus persica HOM05D007587 ORTHO05D009657 3.4e-18 94.7 62 61.3
CSS0038445 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 4.4e-18 94.4 53 67.9
FAN23G2556 Fragaria x ananassa HOM05D007587 ORTHO05D009657 4.4e-18 94.4 49 73.5
Cpa.g.sc15.59 Carica papaya HOM05D007587 ORTHO05D009657 7.5e-18 93.6 48 70.8
Ciclev10027038m.g Citrus clementina HOM05D007587 ORTHO05D009657 7.5e-18 93.6 75 54.7
COL.COLO4_22178 Corchorus olitorius HOM05D007587 ORTHO05D009657 7.5e-18 93.6 68 55.9
TPR.G29850 Trifolium pratense HOM05D007587 ORTHO05D009657 9.8e-18 93.2 49 75.5
Cc07_g05380 Coffea canephora HOM05D007587 ORTHO05D009657 1.3e-17 92.8 47 72.3
FAN26G0670 Fragaria x ananassa HOM05D007587 ORTHO05D009657 1.3e-17 92.8 49 71.4
Manes.13G132300 Manihot esculenta HOM05D007587 ORTHO05D009657 1.3e-17 92.8 74 48.6
Psat2g163680 Pisum sativum HOM05D007587 ORTHO05D009657 1.3e-17 92.8 68 57.4
Atru.chr3.473 Acer truncatum HOM05D007587 ORTHO05D009657 1.7e-17 92.4 55 61.8
Glyma.11G061100 Glycine max HOM05D007587 ORTHO05D009657 1.7e-17 92.4 53 69.8
Psat0s261g0120 Pisum sativum HOM05D007587 ORTHO05D009657 1.7e-17 92.4 63 63.5
QL06p044263 Quercus lobata HOM05D007587 ORTHO05D009657 1.7e-17 92.4 50 70.0
Medtr5g018610 Medicago truncatula HOM05D007587 ORTHO05D009657 2.2e-17 92.0 70 57.1
Phvul.002G023800 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 2.9e-17 91.7 68 54.4
TAR381G1104 Trochodendron aralioides HOM05D007587 ORTHO05D009657 4.9e-17 90.9 56 62.5
Potri.005G130750 Populus trichocarpa HOM05D007587 ORTHO05D009657 6.4e-17 90.5 73 56.2
arahy.Tifrunner.gnm1.ann1.986LRW Arachis hypogaea HOM05D007587 ORTHO05D009657 1.4e-16 89.4 49 67.3
arahy.Tifrunner.gnm1.ann1.JQT6QK Arachis hypogaea HOM05D007587 ORTHO05D009657 1.4e-16 89.4 49 67.3
SalBow1G8004 Salvia bowleyana HOM05D007587 ORTHO05D009657 1.4e-16 89.4 49 65.3
Lj2g0021293 Lotus japonicus HOM05D007587 ORTHO05D009657 3.2e-16 88.2 53 66.0
Potri.007G034000 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.2e-15 86.3 55 54.5
Glyma.16G143900 Glycine max HOM05D007587 ORTHO05D009657 2.7e-15 85.1 46 63.0
Lsat_1_v5_gn_2_87241 Lactuca sativa HOM05D007587 ORTHO05D009657 2.7e-15 85.1 47 68.1
Glyma.02G061500 Glycine max HOM05D007587 ORTHO05D009657 3.5e-15 84.7 62 54.8
Phvul.003G249500 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 6.0e-15 84.0 46 67.4
Lsat_1_v5_gn_3_93981 Lactuca sativa HOM05D007587 ORTHO05D009657 7.8e-15 83.6 75 50.7
Zm00001eb135300 Zea mays HOM05D007587 ORTHO05D009657 1.3e-14 82.8 44 63.6
Glyma.19G074100 Glycine max HOM05D007587 ORTHO05D009657 1.1e-13 79.7 46 60.9
CsaV3_2G017120 Cucumis sativus L. HOM05D007587 ORTHO05D009657 2.5e-13 78.6 46 63.0
Os12g0596101 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 3.3e-13 78.2 43 58.1
ClCG02G013040 Citrullus lanatus HOM05D007587 ORTHO05D009657 9.5e-13 76.6 72 47.2
Sed0017528 Sechium edule HOM05D007587 ORTHO05D009657 9.5e-13 76.6 50 58.0
MBI16_g05020_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 1.2e-12 76.3 51 54.9
Atru.chr13.897 Acer truncatum HOM05D007587 ORTHO05D009657 3.6e-12 74.7 50 56.0
AagrBONN_evm.TU.Sc2ySwM_117.169 Anthoceros agrestis HOM05D007587 ORTHO05D009657 4.7e-12 74.3 52 51.9
Nitab4.5_0015343g0010 Nicotiana tabacum HOM05D007587 ORTHO05D009657 4.7e-12 74.3 43 60.5
SalBow7G1850 Salvia bowleyana HOM05D007587 ORTHO05D009657 6.2e-12 73.9 43 62.8
PGSC0003DMG400004952 Solanum tuberosum HOM05D007587 ORTHO05D009657 8.1e-12 73.6 52 48.1
CAN.G416.39 Capsicum annuum HOM05D007587 ORTHO05D009657 1.4e-11 72.8 52 50.0
GSVIVG01034787001 Vitis vinifera HOM05D007587 ORTHO05D009657 1.4e-11 72.8 67 43.3
CDE06G1347 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 1.8e-11 72.4 43 60.5
vmacro04608 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 1.8e-11 72.4 52 53.8
Rhsim07G0216100 Rhododendron simsii HOM05D007587 ORTHO05D009657 3.1e-11 71.6 43 58.1
Rhsim07G0216200 Rhododendron simsii HOM05D007587 ORTHO05D009657 3.1e-11 71.6 43 58.1
vmacro04607 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 4.0e-11 71.2 43 60.5
vmacro04609 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 4.0e-11 71.2 43 60.5
CSS0045179 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 5.2e-11 70.9 43 55.8
TAR381G0827 Trochodendron aralioides HOM05D007587 ORTHO05D009657 5.2e-11 70.9 56 50.0
Manes.18G051550 Manihot esculenta HOM05D007587 ORTHO05D009657 8.9e-11 70.1 43 58.1
Potri.005G150300 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.2e-10 69.7 43 58.1
MBI16_g05021_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 1.5e-10 69.3 51 49.0
CiPaw.15G043600 Carya illinoinensis HOM05D007587 ORTHO05D009657 2.0e-10 68.9 63 42.9
Gohir.A01G124700 Gossypium hirsutum HOM05D007587 ORTHO05D009657 2.0e-10 68.9 50 48.0
Gohir.D01G112300 Gossypium hirsutum HOM05D007587 ORTHO05D009657 2.0e-10 68.9 50 48.0
Gorai.002G137200 Gossypium raimondii HOM05D007587 ORTHO05D009657 2.0e-10 68.9 50 48.0
QL02p001961 Quercus lobata HOM05D007587 ORTHO05D009657 2.0e-10 68.9 43 55.8
CiPaw.15G043500 Carya illinoinensis HOM05D007587 ORTHO05D009657 2.6e-10 68.6 63 42.9
Migut.C00432 Erythranthe guttata HOM05D007587 ORTHO05D009657 2.6e-10 68.6 43 58.1
Nn5g27361 Nelumbo nucifera HOM05D007587 ORTHO05D009657 2.6e-10 68.6 43 55.8
Nn5g27362 Nelumbo nucifera HOM05D007587 ORTHO05D009657 3.4e-10 68.2 43 53.5
Actinidia29637 Actinidia chinensis HOM05D007587 ORTHO05D009657 4.4e-10 67.8 43 51.2
Zm00001eb052110 Zea mays HOM05D007587 ORTHO05D009657 4.4e-10 67.8 43 55.8
CDE04G0885 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 5.8e-10 67.4 58 44.8
CBR_g28808 Chara braunii HOM05D007587 ORTHO05D009657 5.8e-10 67.4 72 37.5
Cc10_g07830 Coffea canephora HOM05D007587 ORTHO05D009657 5.8e-10 67.4 43 55.8
Migut.O00867 Erythranthe guttata HOM05D007587 ORTHO05D009657 5.8e-10 67.4 43 55.8
Nn5g27360 Nelumbo nucifera HOM05D007587 ORTHO05D009657 9.9e-10 66.6 43 55.8
Os03g0673700 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 9.9e-10 66.6 52 46.2
Hma1.2p1_2651F.1_g326150 Hydrangea macrophylla HOM05D007587 ORTHO05D009657 1.7e-09 65.9 43 51.2
COL.COLO4_35374 Corchorus olitorius HOM05D007587 ORTHO05D009657 2.9e-09 65.1 43 51.2
Thecc.08G082100 Theobroma cacao HOM05D007587 ORTHO05D009657 2.9e-09 65.1 43 51.2
Cfa017911 Carpinus fangiana HOM05D007587 ORTHO05D009657 3.7e-09 64.7 43 51.2
Os03g0673400 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 3.7e-09 64.7 49 44.9
Pp3c20_19960 Physcomitrium patens HOM05D007587 ORTHO05D009657 6.4e-09 63.9 49 53.1
Mapoly0026s0006 Marchantia polymorpha HOM05D007587 ORTHO05D009657 2.4e-08 62.0 72 38.9
Nn4g24320 Nelumbo nucifera HOM05D007587 ORTHO05D009657 2.4e-08 62.0 43 51.2
Pp3c24_89 Physcomitrium patens HOM05D007587 ORTHO05D009657 2.1e-07 58.9 48 47.9
CiPaw.01G029300 Carya illinoinensis HOM05D007587 ORTHO05D009657 1.0e-06 56.6 37 62.2
Pp3c19_1061 Physcomitrium patens HOM05D007587 ORTHO05D009657 5.1e-06 54.3 45 48.9


User provided reference genes

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