Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 1.2e-83 313.2 160 100.0
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 2.3e-79 298.9 164 94.5
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 1.0e-66 256.9 167 83.2
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 2.8e-64 248.8 167 79.0
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 5.4e-60 234.6 170 74.7
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 1.1e-55 220.3 172 68.0
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 4.0e-55 218.4 154 75.3
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.7e-35 152.5 172 52.3
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.7e-35 152.5 171 52.6
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 3.5e-35 152.1 147 56.5
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 1.9e-33 146.4 149 58.4
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 1.3e-32 143.7 145 57.9
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.6e-32 142.1 151 53.0
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 3.6e-32 142.1 153 52.9
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 8.1e-32 141.0 151 53.0
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 1.1e-31 140.6 145 53.8
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 1.4e-31 140.2 159 53.5
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.4e-31 140.2 157 50.3
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 1.4e-31 140.2 153 51.0
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 2.4e-31 139.4 154 50.6
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 3.1e-31 139.0 156 51.3
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 4.0e-31 138.7 151 51.7
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 1.2e-30 137.1 149 51.0
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 3.4e-30 135.6 159 48.4
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.7e-29 133.3 165 46.7
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 1.7e-29 133.3 155 49.0
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.2e-28 128.6 159 46.5
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 7.1e-28 127.9 155 49.0
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 7.1e-28 127.9 176 46.0
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 9.3e-28 127.5 125 57.6
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.6e-27 126.7 159 45.3
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.6e-27 126.7 174 44.8
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.1e-27 126.3 159 44.7
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 2.1e-27 126.3 157 47.8
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 2.7e-27 125.9 144 49.3
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 2.7e-27 125.9 153 47.7
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 4.6e-27 125.2 167 45.5
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 1.3e-26 123.6 157 45.9
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 1.8e-26 123.2 149 47.7
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 1.8e-26 123.2 143 49.7
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 1.8e-26 123.2 144 51.4
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 2.3e-26 122.9 174 43.1
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 3.0e-26 122.5 157 46.5
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 3.9e-26 122.1 161 43.5
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 5.1e-26 121.7 160 44.4
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 6.7e-26 121.3 158 45.6
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 8.7e-26 120.9 160 45.0
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 1.5e-25 120.2 162 44.4
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.9e-25 119.8 171 43.3
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 3.3e-25 119.0 135 51.9
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 7.4e-25 117.9 149 45.6
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 7.4e-25 117.9 166 44.0
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 1.6e-24 116.7 161 45.3
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.6e-24 116.7 158 44.3
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 3.7e-24 115.5 159 44.0
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 1.1e-23 114.0 155 48.4
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 3.1e-23 112.5 125 52.0
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.2e-22 110.5 128 48.4
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 7.6e-22 107.8 148 45.3
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 8.4e-21 104.4 181 39.2
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 1.4e-20 103.6 127 48.8
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 5.5e-20 101.7 163 41.7
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.2e-19 100.5 126 46.0
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 2.1e-19 99.8 124 42.7
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 4.6e-19 98.6 146 41.8
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 1.0e-18 97.4 124 48.4
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 1.8e-18 96.7 147 44.2
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 5.1e-18 95.1 160 40.0
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 1.9e-17 93.2 110 49.1
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.5e-17 92.8 121 44.6
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 4.8e-16 88.6 130 43.1
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 6.2e-16 88.2 130 41.5
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 6.2e-16 88.2 130 42.3
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 1.0e-13 80.9 136 37.5
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 2.9e-13 79.3 91 47.3
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 6.5e-13 78.2 89 49.4
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 8.4e-13 77.8 105 44.8
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 2.7e-11 72.8 79 51.9
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.6e-08 63.5 123 36.6


User provided reference genes

Program Settings