Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 1.8e-251 872.1 425 100.0
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 3.8e-238 827.8 411 98.3
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 3.0e-227 791.6 411 94.4
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 3.1e-211 738.4 424 85.4
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 1.5e-210 736.1 424 85.8
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 7.3e-205 717.2 405 86.2
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 2.9e-169 599.0 411 74.9
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 5.5e-160 568.2 383 71.8
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 2.5e-157 559.3 379 72.3
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 1.3e-156 557.0 403 69.0
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 2.6e-154 549.3 362 72.7
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 3.9e-150 535.4 399 66.2
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 5.1e-150 535.0 366 70.2
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 1.9e-149 533.1 368 72.6
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.5e-149 532.7 378 69.8
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 1.3e-148 530.4 413 65.4
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 2.2e-148 529.6 376 69.1
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 2.2e-148 529.6 376 68.9
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 6.3e-148 528.1 378 69.8
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.1e-147 527.3 345 72.5
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 5.3e-147 525.0 412 63.3
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 9.1e-147 524.2 371 67.9
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 3.4e-146 522.3 359 69.4
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 7.7e-146 521.2 413 62.2
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 1.0e-145 520.8 358 67.9
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 2.2e-145 519.6 344 71.5
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 2.5e-144 516.2 352 70.5
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 3.2e-144 515.8 351 71.5
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 4.2e-144 515.4 418 61.7
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 7.2e-144 514.6 379 66.2
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 1.2e-143 513.8 395 63.5
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 3.6e-143 512.3 371 67.4
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 7.9e-143 511.1 367 68.4
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 1.4e-142 510.4 344 70.6
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 1.4e-142 510.4 388 64.2
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.8e-142 510.0 356 68.8
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 2.3e-142 509.6 371 66.8
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 2.3e-142 509.6 371 66.8
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 2.3e-142 509.6 342 71.1
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 3.0e-142 509.2 394 64.5
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 5.1e-142 508.4 340 72.4
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 2.6e-141 506.1 345 70.4
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 5.7e-141 505.0 364 68.4
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 7.4e-141 504.6 346 69.9
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 7.4e-141 504.6 345 69.0
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 9.7e-141 504.2 394 62.2
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 1.3e-140 503.8 382 65.2
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 1.7e-140 503.4 427 61.4
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 2.2e-140 503.1 356 68.3
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 2.2e-140 503.1 342 70.8
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 2.2e-140 503.1 309 77.3
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 2.8e-140 502.7 390 63.8
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 2.8e-140 502.7 390 63.8
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 3.7e-140 502.3 342 70.5
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 3.7e-140 502.3 340 69.4
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 6.3e-140 501.5 356 68.3
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 8.2e-140 501.1 431 61.5
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.1e-139 500.7 426 60.3
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 1.4e-139 500.4 377 63.7
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 1.4e-139 500.4 343 68.5
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.8e-139 500.0 377 63.7
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 4.1e-139 498.8 405 61.0
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.5e-138 496.9 340 68.5
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 2.0e-138 496.5 369 65.0
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 2.6e-138 496.1 342 69.9
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 3.4e-138 495.7 410 62.7
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 4.5e-138 495.4 356 65.4
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 7.7e-138 494.6 392 63.3
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 1.3e-137 493.8 374 65.8
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 2.9e-137 492.7 422 59.7
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 6.5e-137 491.5 342 69.0
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 8.5e-137 491.1 347 68.6
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.4e-136 490.3 356 66.3
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 1.9e-136 490.0 371 65.0
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 1.9e-136 490.0 371 65.0
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 3.6e-135 485.7 400 60.0
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 6.1e-135 485.0 377 63.4
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 2.3e-134 483.0 375 62.9
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 2.3e-134 483.0 372 64.0
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 5.2e-134 481.9 372 63.7
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 1.1e-133 480.7 368 64.9
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 2.6e-133 479.6 317 70.3
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 4.4e-133 478.8 340 67.6
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 9.7e-133 477.6 346 69.9
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 6.3e-132 474.9 348 65.2
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.1e-131 474.2 341 66.3
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 1.2e-130 470.7 340 66.8
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 4.5e-130 468.8 321 69.5
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 7.7e-130 468.0 368 63.3
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 3.7e-124 449.1 341 62.2
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 1.1e-123 447.6 346 63.6
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.4e-123 447.2 373 61.1
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 1.4e-118 430.6 296 69.6
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 4.0e-118 429.1 358 62.0
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 3.8e-113 412.5 346 59.0
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 1.9e-112 410.2 282 71.6
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 5.9e-106 388.7 256 73.0
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 5.6e-104 382.1 341 54.3
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 7.3e-104 381.7 248 72.2
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 3.1e-102 376.3 304 63.2
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 5.4e-99 365.5 248 69.4
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.1e-96 357.8 318 58.8
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.1e-94 351.3 271 66.4
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 2.5e-88 330.1 364 47.5
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 6.8e-86 322.0 347 49.0
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 2.1e-82 310.5 239 63.6
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 1.3e-81 307.8 360 43.6
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 7.6e-69 265.4 344 41.6
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 6.4e-60 235.7 184 62.0
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 1.3e-41 174.9 183 47.5
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 3.7e-39 166.8 125 61.6
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 2.2e-36 157.5 159 53.5
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.0e-36 156.4 159 52.2
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 7.2e-35 152.5 91 73.6
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 2.1e-34 151.0 112 63.4
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.9e-27 127.9 93 62.4
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 1.2e-18 98.6 85 58.8
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 6.3e-15 86.3 93 50.5
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 4.1e-14 83.6 53 67.9


User provided reference genes

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