Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 4.9e-98 361.3 205 100.0
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 4.6e-88 328.2 194 92.8
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 1.6e-72 276.6 200 85.5
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 4.2e-65 251.9 205 77.6
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 1.3e-61 240.4 199 73.9
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 2.6e-59 232.6 203 71.9
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 4.2e-57 225.3 194 70.1
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 1.4e-20 104.0 164 47.0
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 3.2e-17 92.8 164 41.5
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 2.8e-16 89.7 163 43.6
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 3.6e-16 89.4 163 44.8
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 1.8e-15 87.0 165 42.4
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 2.3e-15 86.7 179 43.6
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 6.8e-15 85.1 161 40.4
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 2.0e-14 83.6 159 39.6
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 2.6e-14 83.2 187 40.1
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 5.7e-14 82.0 180 39.4
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 7.5e-14 81.6 180 37.8
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 9.8e-14 81.3 175 39.4
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 1.3e-13 80.9 168 39.3
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 1.3e-13 80.9 167 41.3
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 3.7e-13 79.3 165 40.0
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 8.3e-13 78.2 151 40.4
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 8.3e-13 78.2 180 33.3
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 8.3e-13 78.2 157 40.1
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 1.1e-12 77.8 161 44.7
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 2.4e-12 76.6 166 44.0
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 3.1e-12 76.3 158 40.5
Hma1.2p1_0375F.1_g138910 Hydrangea macrophylla HOM05D007804 ORTHO05D009828 3.1e-12 76.3 165 43.0
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 1.6e-11 73.9 185 32.4
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 2.0e-11 73.6 175 35.4
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 4.5e-11 72.4 157 36.3
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 4.5e-11 72.4 188 34.0
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 1.3e-10 70.9 186 35.5
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 2.3e-10 70.1 170 34.7
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 3.8e-10 69.3 152 40.1
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 5.0e-10 68.9 171 36.8
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 8.6e-10 68.2 171 36.3
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 8.6e-10 68.2 171 36.3
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 1.1e-09 67.8 174 33.9
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.1e-09 67.8 171 36.3
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 1.5e-09 67.4 160 36.2
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 1.5e-09 67.4 210 31.0
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 2.5e-09 66.6 168 37.5
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 2.5e-09 66.6 186 34.9
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 3.3e-09 66.2 160 35.0
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 3.3e-09 66.2 172 32.6
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 4.3e-09 65.9 171 35.1
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 7.3e-09 65.1 165 36.4
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 1.2e-08 64.3 178 37.6
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 1.6e-08 63.9 165 37.0
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 3.6e-08 62.8 170 36.5
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 4.7e-08 62.4 160 35.6
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 8.0e-08 61.6 158 37.3
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 1.0e-07 61.2 167 34.1
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 1.8e-07 60.5 164 34.1
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 4.0e-07 59.3 181 32.0
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 5.2e-07 58.9 178 33.7
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 5.2e-07 58.9 168 35.1
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 6.8e-07 58.5 171 31.0
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 6.8e-07 58.5 181 32.0
Sp2g17190 Schrenkiella parvula HOM05D007804 ORTHO05D009828 1.2e-06 57.8 188 31.9
AL5G18030 Arabidopsis lyrata HOM05D007804 ORTHO05D009828 1.5e-06 57.4 175 33.7
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 1.5e-06 57.4 164 34.8
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 1.5e-06 57.4 175 32.0
Carub.0005s0691 Capsella rubella HOM05D007804 ORTHO05D009828 2.0e-06 57.0 163 33.7
Lalb_Chr02g0159931 Lupinus albus HOM05D007804 ORTHO05D009828 2.0e-06 57.0 176 35.2
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 2.0e-06 57.0 145 34.5
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 3.4e-06 56.2 160 31.2
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 3.4e-06 56.2 160 31.2
A02p35930 Brassica napus HOM05D007804 ORTHO05D009828 4.4e-06 55.8 157 35.0
Atru.chr8.2473 Acer truncatum HOM05D007804 ORTHO05D009828 5.7e-06 55.5 63 50.8
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 5.7e-06 55.5 190 33.2
Psat1g077160 Pisum sativum HOM05D007804 ORTHO05D009828 5.7e-06 55.5 190 30.5
AT3G28420 Arabidopsis thaliana HOM05D007804 ORTHO05D009828 7.5e-06 55.1 178 32.0
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 7.5e-06 55.1 173 35.3
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 7.5e-06 55.1 173 35.3
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 7.5e-06 55.1 173 35.3
BcaC06g33740 Brassica carinata HOM05D007804 ORTHO05D009828 9.8e-06 54.7 170 32.4
C07p37470 Brassica napus HOM05D000068 ORTHO05D009828 9.8e-06 54.7 201 29.4
BolC7t44259H Brassica oleracea HOM05D000068 ORTHO05D009828 9.8e-06 54.7 201 29.4


User provided reference genes

Program Settings