Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 4.5e-92 341.3 176 100.0
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 4.8e-86 321.2 177 96.6
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 7.2e-82 307.4 194 87.6
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 9.1e-69 263.8 181 78.5
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 3.8e-67 258.5 155 89.0
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 5.0e-67 258.1 177 78.0
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 1.1e-66 256.9 179 74.3
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 1.5e-66 256.5 176 76.7
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 1.5e-66 256.5 155 89.0
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 1.9e-66 256.1 179 78.8
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 5.5e-66 254.6 178 76.4
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 5.5e-66 254.6 178 76.4
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 5.5e-66 254.6 178 76.4
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 1.2e-65 253.4 178 75.3
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 2.8e-65 252.3 179 77.1
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 2.8e-65 252.3 176 77.8
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 3.6e-65 251.9 176 76.7
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 3.6e-65 251.9 156 88.5
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 1.4e-64 250.0 179 76.0
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 1.8e-64 249.6 180 75.6
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 2.3e-64 249.2 176 75.6
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 3.0e-64 248.8 179 74.3
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 6.8e-64 247.7 178 75.3
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 6.8e-64 247.7 179 73.7
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 1.2e-63 246.9 179 74.3
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 2.0e-63 246.1 179 73.7
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 3.4e-63 245.4 179 74.9
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 9.8e-63 243.8 178 74.7
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 9.8e-63 243.8 180 73.9
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 3.7e-62 241.9 179 73.2
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 4.9e-62 241.5 179 72.1
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 4.9e-62 241.5 179 70.9
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 1.8e-61 239.6 179 70.9
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 2.4e-61 239.2 179 73.2
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 2.4e-61 239.2 179 70.9
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 2.4e-61 239.2 179 70.9
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 7.0e-61 237.7 179 70.4
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 9.2e-61 237.3 179 70.4
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 2.0e-60 236.1 179 69.8
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 2.0e-60 236.1 181 72.9
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 1.0e-59 233.8 179 68.2
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 2.3e-59 232.6 179 69.3
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 2.3e-59 232.6 179 69.3
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 2.3e-59 232.6 179 69.3
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 3.8e-59 231.9 181 69.1
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 3.3e-58 228.8 181 68.0
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 4.3e-58 228.4 179 68.7
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 7.3e-58 227.6 179 68.7
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 1.6e-57 226.5 181 68.0
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 1.6e-57 226.5 198 63.6
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 6.1e-57 224.6 181 65.7
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 6.1e-57 224.6 179 67.6
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 8.0e-57 224.2 181 66.3
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 1.0e-56 223.8 181 65.7
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 1.4e-56 223.4 181 66.3
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 1.8e-56 223.0 180 66.7
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.8e-56 223.0 200 60.5
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 2.3e-56 222.6 181 65.7
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 4.0e-56 221.9 190 66.3
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 8.9e-56 220.7 179 69.8
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 1.2e-55 220.3 181 64.6
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 1.5e-55 219.9 182 64.3
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 1.5e-55 219.9 182 64.3
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 1.5e-55 219.9 179 70.4
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 2.0e-55 219.5 182 64.8
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 2.6e-55 219.2 182 64.8
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 2.6e-55 219.2 159 73.0
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 4.4e-55 218.4 182 64.3
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 9.8e-55 217.2 155 72.9
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 1.7e-54 216.5 182 63.2
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 2.2e-54 216.1 138 82.6
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 1.4e-53 213.4 153 74.5
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 1.8e-53 213.0 179 63.7
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 4.1e-53 211.8 188 64.4
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 4.1e-53 211.8 179 63.7
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 2.7e-52 209.1 229 54.6
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 2.7e-52 209.1 154 74.0
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 4.6e-52 208.4 179 62.0
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 1.0e-51 207.2 180 60.6
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 1.9e-50 203.0 179 60.9
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 4.7e-49 198.4 140 75.7
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.4e-48 196.8 141 73.8
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 1.8e-48 196.4 141 73.8
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 2.3e-48 196.1 161 66.5
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 3.1e-48 195.7 154 64.9
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 4.0e-48 195.3 154 64.9
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 1.3e-46 190.3 152 65.1
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 3.2e-45 185.7 178 56.2
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 7.0e-45 184.5 138 68.8
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 1.2e-44 183.7 137 73.7
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 5.6e-42 174.9 153 59.5
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 7.3e-42 174.5 176 57.4
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 1.4e-40 170.2 181 49.2
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 6.8e-40 167.9 126 70.6
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 9.9e-39 164.1 159 56.6
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 4.6e-36 155.2 161 57.8
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 7.8e-36 154.5 137 65.7
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 1.7e-35 153.3 160 53.8
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 2.0e-31 139.8 107 71.0
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 2.1e-25 119.8 157 45.2
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 1.7e-14 83.6 180 31.1
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 9.3e-13 77.8 46 78.3
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 3.9e-11 72.4 204 26.0
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 6.7e-11 71.6 43 79.1
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 6.9e-08 61.6 88 45.5
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 1.5e-07 60.5 176 27.3
ECA246G4860 Erigeron canadensis HOM05D006555 ORTHO05D008376 1.3e-06 57.4 176 25.0
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 2.9e-06 56.2 183 25.1
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 4.9e-06 55.5 129 31.8
EL10Ac3g05120 Beta vulgaris HOM05D006555 ORTHO05D008376 6.4e-06 55.1 183 24.6


User provided reference genes

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