Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g085500.4 Solanum lycopersicum HOM05D000401 ORTHO05D000252 5.9e-150 534.3 286 100.0
Sopen02g030180 Solanum pennellii HOM05D000401 ORTHO05D000252 1.2e-134 483.4 278 95.3
PGSC0003DMG400012688 Solanum tuberosum HOM05D000401 ORTHO05D000252 3.7e-104 382.1 278 82.0
CAN.G358.113 Capsicum annuum HOM05D000401 ORTHO05D000252 1.1e-79 300.8 286 66.4
Nitab4.5_0001827g0120 Nicotiana tabacum HOM05D000401 ORTHO05D000252 5.4e-79 298.5 292 67.8
Peaxi162Scf00515g00313 Petunia axillaris HOM05D000401 ORTHO05D000252 1.3e-59 234.2 302 57.0
Nitab4.5_0001466g0080 Nicotiana tabacum HOM05D000401 ORTHO05D000252 1.7e-40 170.6 340 43.5
Peaxi162Scf00751g00410 Petunia axillaris HOM05D000401 ORTHO05D000252 5.5e-39 165.6 304 46.4
Nitab4.5_0001279g0040 Nicotiana tabacum HOM05D000401 ORTHO05D000252 1.0e-37 161.4 177 67.8
Nitab4.5_0004721g0060 Nicotiana tabacum HOM05D000401 ORTHO05D000252 7.4e-36 155.2 325 41.2
Lj2A449T51 Lonicera japonica HOM05D000401 ORTHO05D000252 5.0e-32 142.5 308 41.9
Haze_15113 Corylus avellana HOM05D000401 ORTHO05D000252 8.5e-32 141.7 313 43.8
Cfa004285 Carpinus fangiana HOM05D000401 ORTHO05D000252 3.6e-30 136.3 312 42.9
Oeu002971.1 Olea europaea HOM05D000401 ORTHO05D000252 4.7e-30 136.0 314 40.4
TAR628G1031 Trochodendron aralioides HOM05D000401 ORTHO05D000252 1.4e-29 134.4 312 41.0
Nn1g05061 Nelumbo nucifera HOM05D000401 ORTHO05D000252 2.3e-29 133.7 320 36.9
TAR628G1738 Trochodendron aralioides HOM05D000401 ORTHO05D000252 4.0e-29 132.9 312 41.0
CiPaw.01G035600 Carya illinoinensis HOM05D000401 ORTHO05D000252 1.3e-27 127.9 309 35.9
Oeu037890.1 Olea europaea HOM05D000401 ORTHO05D000252 1.3e-27 127.9 321 40.8
Ciclev10025709m.g Citrus clementina HOM05D000401 ORTHO05D000252 2.2e-27 127.1 345 37.7
QL06p045539 Quercus lobata HOM05D000401 ORTHO05D000252 4.8e-27 125.9 310 40.0
TAR376G0096 Trochodendron aralioides HOM05D000401 ORTHO05D000252 7.0e-26 122.1 307 39.1
Duzib147G1137 Durio zibethinus HOM05D000401 ORTHO05D000252 1.3e-24 117.9 311 38.9
PGSC0003DMG400017788 Solanum tuberosum HOM05D000401 ORTHO05D000252 1.7e-24 117.5 345 35.4
Solyc03g034100.4 Solanum lycopersicum HOM05D000401 ORTHO05D000252 2.9e-24 116.7 340 32.9
Manes.01G133500 Manihot esculenta HOM05D000401 ORTHO05D000252 1.9e-23 114.0 311 38.9
FvH4_1g13640 Fragaria vesca HOM05D000401 ORTHO05D000252 4.2e-23 112.8 305 36.7
FAN26G0682 Fragaria x ananassa HOM05D000401 ORTHO05D000252 4.2e-23 112.8 305 36.7
FAN28G2367 Fragaria x ananassa HOM05D000401 ORTHO05D000252 4.2e-23 112.8 305 36.7
Hma1.2p1_0717F.1_g208240 Hydrangea macrophylla HOM05D000401 ORTHO05D000252 5.5e-23 112.5 313 36.7
GSVIVG01018989001 Vitis vinifera HOM05D000401 ORTHO05D000252 5.5e-23 112.5 278 38.1
FAN23G0605 Fragaria x ananassa HOM05D000401 ORTHO05D000252 7.2e-23 112.1 305 36.7
Thecc.01G038700 Theobroma cacao HOM05D000401 ORTHO05D000252 1.2e-22 111.3 316 37.3
Duzib264G0037 Durio zibethinus HOM05D000401 ORTHO05D000252 2.1e-22 110.5 315 37.5
Nn5g29550 Nelumbo nucifera HOM05D000401 ORTHO05D000252 2.1e-22 110.5 320 33.4
RcHm_v2.0_Chr2g0101991 Rosa chinensis HOM05D000401 ORTHO05D000252 3.6e-22 109.8 309 35.6
FAN19G2628 Fragaria x ananassa HOM05D000401 ORTHO05D000252 4.7e-22 109.4 305 36.4
GSVIVG01009691001 Vitis vinifera HOM05D000401 ORTHO05D000252 8.0e-22 108.6 292 34.6
Sc16g0000930 Simmondsia chinensis HOM05D000401 ORTHO05D000252 3.0e-21 106.7 290 33.1
Sc16g0000980 Simmondsia chinensis HOM05D000401 ORTHO05D000252 5.2e-21 105.9 290 33.1
TWI09G1341 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 5.2e-21 105.9 305 35.7
ECA246G0887 Erigeron canadensis HOM05D000401 ORTHO05D000252 1.5e-20 104.4 300 34.7
MBI16_g36973_MAGBIO Magnolia biondii HOM05D000401 ORTHO05D000252 2.0e-20 104.0 310 35.2
Sabra05G0102800 Salix brachista HOM05D000401 ORTHO05D000252 2.0e-20 104.0 322 35.4
Lsat_1_v5_gn_3_78360 Lactuca sativa HOM05D000401 ORTHO05D000252 5.7e-20 102.4 306 35.6
MSTRG.23539 Avicennia marina HOM05D000401 ORTHO05D000252 1.3e-19 101.3 308 36.0
Sopen03g006880 Solanum pennellii HOM05D000401 ORTHO05D000252 6.3e-19 99.0 150 47.3
Potri.005G125200 Populus trichocarpa HOM05D000401 ORTHO05D000252 1.1e-18 98.2 312 35.6
Manes.02G091700 Manihot esculenta HOM05D000401 ORTHO05D000252 9.1e-18 95.1 316 33.2
Potri.007G028000 Populus trichocarpa HOM05D000401 ORTHO05D000252 1.6e-17 94.4 308 37.3
Cpa.g.c30864 Carica papaya HOM05D000401 ORTHO05D000252 2.7e-17 93.6 314 34.1
vmacro17850 Vaccinium macrocarpon HOM05D000401 ORTHO05D000252 5.9e-17 92.4 299 35.5
Sabra07G0024300 Salix brachista HOM05D000401 ORTHO05D000252 6.5e-16 89.0 307 36.5
Atru.chr3.549 Acer truncatum HOM05D000401 ORTHO05D000252 1.1e-15 88.2 333 32.7
HanXRQChr16g0530181 Helianthus annuus HOM05D000401 ORTHO05D000252 2.5e-15 87.0 283 35.0
Dinv39966 Davidia involucrata HOM05D038181 ORTHO05D000252 9.5e-15 85.1 222 41.0
Cc07_g09290 Coffea canephora HOM05D000401 ORTHO05D000252 1.2e-14 84.7 313 32.6
Gohir.A02G164300 Gossypium hirsutum HOM05D000401 ORTHO05D000252 2.1e-14 84.0 312 31.4
SalBow5G4271 Salvia bowleyana HOM05D000401 ORTHO05D000252 6.1e-14 82.4 279 33.3
CANSAT01G1343 Cannabis sativa HOM05D000401 ORTHO05D000252 3.0e-13 80.1 337 30.6
TWI73G0165 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 4.0e-13 79.7 311 33.8
ClCG07G009070 Citrullus lanatus HOM05D000401 ORTHO05D000252 5.2e-13 79.3 143 43.4
DCAR_025926 Daucus carota HOM05D000401 ORTHO05D000252 5.2e-13 79.3 136 49.3
Gorai.003G016100 Gossypium raimondii HOM05D000401 ORTHO05D000252 6.8e-13 79.0 311 30.5
CsaV3_4G005140 Cucumis sativus L. HOM05D000401 ORTHO05D000252 2.6e-12 77.0 127 44.1
CAN.G366.4 Capsicum annuum HOM05D002627 ORTHO05D002823 3.4e-12 76.6 97 46.4
Gohir.D03G015900 Gossypium hirsutum HOM05D000401 ORTHO05D000252 3.4e-12 76.6 314 31.2
PSO700G0098 Papaver somniferum HOM05D000401 ORTHO05D000252 9.8e-12 75.1 350 29.4
Potri.002G262500 Populus trichocarpa HOM05D000401 ORTHO05D000252 4.9e-11 72.8 304 31.9
MELO3C017554.2 Cucumis melo HOM05D000401 ORTHO05D000252 1.4e-10 71.2 127 41.7
CSS0006562 Camellia sinensis var. sinensis HOM05D000401 ORTHO05D000252 4.1e-10 69.7 45 80.0
Thecc.08G024800 Theobroma cacao HOM05D000401 ORTHO05D000252 7.0e-10 68.9 308 29.2
Duzib041G0346 Durio zibethinus HOM05D000401 ORTHO05D000252 9.2e-10 68.6 320 29.4
Dinv36068 Davidia involucrata HOM05D000401 ORTHO05D000252 5.9e-09 65.9 284 29.9
unitig_736.g22539 Utricularia gibba HOM05D000401 ORTHO05D000252 2.9e-08 63.5 199 31.2
Manes.18G028100 Manihot esculenta HOM05D000401 ORTHO05D000252 5.0e-08 62.8 289 31.1
SGA_v2.0_scaffold33G13372 Striga asiatica HOM05D000401 ORTHO05D000252 5.0e-08 62.8 41 63.4
Gohir.D11G192151 Gossypium hirsutum HOM05D000401 ORTHO05D000252 1.1e-07 61.6 115 41.7
COL.COLO4_26337 Corchorus olitorius HOM05D000401 ORTHO05D000252 1.9e-07 60.8 310 28.4
AUR62007995 Chenopodium quinoa HOM05D000401 ORTHO05D000252 3.3e-07 60.1 301 29.6
Manes.05G161300 Manihot esculenta HOM05D000401 ORTHO05D000252 3.3e-07 60.1 280 28.9
DCAR_017254 Daucus carota HOM05D000401 ORTHO05D000252 7.3e-07 58.9 38 73.7
ATR0733G013 Amborella trichopoda HOM05D000401 ORTHO05D000252 9.5e-07 58.5 375 27.5
Gorai.007G205100 Gossypium raimondii HOM05D000401 ORTHO05D000252 1.2e-06 58.2 276 28.6
Hma1.2p1_0203F.1_g086460 Hydrangea macrophylla HOM05D000401 ORTHO05D000252 1.2e-06 58.2 42 57.1
CDE02G2177 Ceratophyllum demersum HOM05D000401 ORTHO05D000252 1.6e-06 57.8 47 66.0
MD02G1151100 Malus domestica HOM05D000401 ORTHO05D000252 1.6e-06 57.8 296 28.4
CDE01G0205 Ceratophyllum demersum HOM05D000401 ORTHO05D000252 2.1e-06 57.4 39 66.7
MD15G1265600 Malus domestica HOM05D000401 ORTHO05D000252 3.6e-06 56.6 299 29.1
TWI56G0929 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 3.6e-06 56.6 286 28.0
Migut.L00559 Erythranthe guttata HOM05D000401 ORTHO05D000252 4.7e-06 56.2 287 28.2
Duzib093G0240 Durio zibethinus HOM05D000401 ORTHO05D000252 6.1e-06 55.8 311 27.3


User provided reference genes

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