Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.1e-54 216.5 114 100.0
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 2.3e-44 182.2 104 94.2
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.4e-30 134.4 123 64.2
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 7.1e-30 134.0 124 63.7
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 6.6e-28 127.5 122 63.9
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 3.8e-23 111.7 125 56.8
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.6e-19 97.8 108 55.6
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 4.0e-17 91.7 102 53.9
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 1.2e-16 90.1 111 54.1
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.5e-16 89.7 105 56.2
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 4.5e-16 88.2 72 69.4
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 9.9e-16 87.0 80 62.5
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 9.9e-16 87.0 82 63.4
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 1.7e-15 86.3 90 61.1
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 2.9e-15 85.5 157 43.3
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 6.4e-15 84.3 108 50.9
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 5.4e-14 81.3 81 60.5
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 9.3e-14 80.5 130 48.5
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 1.6e-13 79.7 132 46.2
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 2.7e-13 79.0 77 63.6
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 7.9e-13 77.4 127 47.2
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 1.0e-12 77.0 125 48.8
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.0e-12 77.0 101 54.5
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 1.3e-12 76.6 75 60.0
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 1.8e-12 76.3 77 58.4
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 3.0e-12 75.5 140 41.4
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.1e-11 73.6 118 49.2
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 1.5e-11 73.2 108 50.0
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 4.3e-11 71.6 113 46.9
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 5.6e-11 71.2 102 50.0
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 5.6e-11 71.2 128 47.7
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 7.4e-11 70.9 56 73.2
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 9.6e-11 70.5 111 47.7
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 9.6e-11 70.5 93 51.6
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 1.3e-10 70.1 128 42.2
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 1.3e-10 70.1 79 57.0
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 1.6e-10 69.7 103 51.5
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 1.6e-10 69.7 72 59.7
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 1.6e-10 69.7 70 60.0
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 2.1e-10 69.3 89 53.9
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 2.8e-10 68.9 98 53.1
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.8e-10 68.9 102 51.0
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 2.8e-10 68.9 79 55.7
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 2.8e-10 68.9 116 42.2
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 3.6e-10 68.6 106 48.1
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.6e-10 68.6 106 48.1
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 4.8e-10 68.2 95 50.5
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 6.2e-10 67.8 77 54.5
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 8.1e-10 67.4 69 56.5
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 8.1e-10 67.4 102 48.0
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 8.1e-10 67.4 102 48.0
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.1e-10 67.4 106 47.2
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 8.1e-10 67.4 124 43.5
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 1.1e-09 67.0 102 48.0
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 1.1e-09 67.0 108 47.2
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-09 67.0 108 47.2
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 1.1e-09 67.0 99 47.5
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 1.1e-09 67.0 96 52.1
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 1.4e-09 66.6 80 51.2
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 1.8e-09 66.2 87 55.2
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 1.8e-09 66.2 100 48.0
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 1.8e-09 66.2 79 55.7
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.8e-09 66.2 64 62.5
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 2.4e-09 65.9 68 60.3
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 2.4e-09 65.9 102 48.0
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 2.4e-09 65.9 53 71.7
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 2.4e-09 65.9 63 61.9
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 3.1e-09 65.5 64 62.5
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 3.1e-09 65.5 64 62.5
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 3.1e-09 65.5 97 49.5
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.1e-09 65.5 110 44.5
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 4.0e-09 65.1 77 57.1
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 4.0e-09 65.1 77 57.1
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 4.0e-09 65.1 74 54.1
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.3e-09 64.7 106 46.2
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 5.3e-09 64.7 81 51.9
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 5.3e-09 64.7 103 47.6
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 5.3e-09 64.7 77 54.5
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 6.9e-09 64.3 90 50.0
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 6.9e-09 64.3 90 50.0
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 9.0e-09 63.9 73 54.8
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 1.2e-08 63.5 102 45.1
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 1.2e-08 63.5 102 45.1
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 1.2e-08 63.5 92 47.8
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 1.2e-08 63.5 70 55.7
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 2.6e-08 62.4 111 43.2
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 3.4e-08 62.0 85 49.4
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 3.4e-08 62.0 67 58.2
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 5.8e-08 61.2 101 42.6
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 7.6e-08 60.8 103 42.7
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 7.6e-08 60.8 119 40.3
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 9.9e-08 60.5 105 42.9
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 1.3e-07 60.1 71 52.1
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 1.3e-07 60.1 104 41.3
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.7e-07 59.7 84 47.6
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 2.2e-07 59.3 112 42.9
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.2e-07 59.3 59 55.9
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 2.2e-07 59.3 78 51.3
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 3.8e-07 58.5 83 49.4
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 3.8e-07 58.5 70 50.0
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 6.4e-07 57.8 102 43.1
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 6.4e-07 57.8 60 53.3
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 4.2e-06 55.1 57 57.9
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 4.2e-06 55.1 84 44.0


User provided reference genes

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