Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 3.7e-246 854.4 414 100.0
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 8.3e-246 853.2 414 99.8
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.6e-228 795.8 414 92.0
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 4.2e-205 718.0 400 85.8
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.1e-200 701.8 413 83.5
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 2.8e-185 652.1 409 80.0
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 1.2e-180 636.7 415 71.8
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 9.0e-176 620.5 401 71.8
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 1.5e-175 619.8 414 70.3
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 7.9e-172 607.4 428 67.5
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 9.1e-168 594.0 399 69.4
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 7.7e-167 590.9 401 70.8
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 5.0e-166 588.2 397 68.8
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 6.5e-166 587.8 400 68.8
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 1.4e-165 586.6 414 65.9
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 2.5e-165 585.9 419 64.9
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 3.0e-163 578.9 411 66.4
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 6.7e-163 577.8 402 68.9
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 6.7e-163 577.8 419 64.4
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 8.8e-163 577.4 398 68.1
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 4.4e-162 575.1 398 68.3
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 5.7e-162 574.7 400 68.2
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.7e-161 573.2 404 66.1
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 4.8e-161 571.6 399 67.9
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 3.1e-160 568.9 397 67.8
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.2e-159 567.0 391 67.3
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.6e-159 566.6 414 63.8
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 2.0e-159 566.2 391 66.2
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 2.6e-159 565.8 400 66.0
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 3.5e-159 565.5 407 66.3
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 1.0e-158 563.9 399 67.4
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 1.7e-158 563.1 398 64.3
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.7e-158 563.1 415 65.1
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 2.2e-158 562.8 416 63.9
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 3.8e-158 562.0 413 63.2
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.1e-157 560.5 400 65.2
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.2e-157 558.9 413 65.6
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 4.2e-157 558.5 465 59.1
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 9.4e-157 557.4 401 65.3
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 2.7e-156 555.8 403 63.5
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 4.7e-156 555.1 394 65.2
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 6.1e-156 554.7 435 62.5
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 6.1e-156 554.7 401 63.8
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 1.4e-155 553.5 400 64.5
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 1.8e-155 553.1 401 63.8
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 3.0e-155 552.4 401 65.3
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 6.7e-155 551.2 404 64.1
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 6.7e-155 551.2 399 66.2
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 2.6e-154 549.3 410 62.0
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 4.4e-154 548.5 412 62.6
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 9.7e-154 547.4 397 64.5
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 1.7e-153 546.6 401 63.3
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 3.7e-153 545.4 404 64.6
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 1.4e-152 543.5 402 63.2
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.4e-152 543.5 404 64.4
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.8e-152 543.1 411 62.8
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 2.4e-152 542.7 400 65.0
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 2.4e-152 542.7 416 62.5
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 7.0e-152 541.2 437 59.5
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 9.1e-152 540.8 388 64.9
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 4.5e-151 538.5 395 63.8
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.7e-150 536.6 413 61.7
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 3.8e-150 535.4 455 59.8
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 1.9e-149 533.1 398 63.8
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 3.6e-148 528.9 374 66.0
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 3.6e-148 528.9 403 62.3
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 1.0e-147 527.3 406 62.8
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 3.0e-147 525.8 420 61.0
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 4.0e-147 525.4 359 69.6
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 6.8e-147 524.6 384 62.5
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 4.8e-145 518.5 426 59.9
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 4.8e-145 518.5 350 68.9
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 8.3e-145 517.7 389 64.3
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.1e-140 503.1 407 61.9
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 1.8e-139 500.0 409 60.1
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 9.8e-138 494.2 361 66.5
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 7.0e-136 488.0 428 56.8
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 9.5e-133 477.6 392 58.9
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 5.2e-131 471.9 400 56.8
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 7.5e-130 468.0 350 61.7
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 7.5e-130 468.0 440 53.2
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.0e-123 445.7 288 71.9
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 1.4e-120 437.2 350 59.1
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.6e-119 433.7 341 61.3
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 2.3e-118 429.9 366 57.1
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.4e-114 416.0 407 55.5
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 4.3e-109 399.1 400 51.2
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 5.6e-109 398.7 375 55.2
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 5.2e-107 392.1 329 56.5
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 7.3e-101 371.7 254 70.1
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 3.1e-91 339.7 305 57.4
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.2e-90 337.8 250 66.4
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 4.5e-90 335.9 403 44.7
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 2.1e-87 327.0 210 70.0
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 3.5e-87 326.2 430 45.3
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 5.6e-85 318.9 356 45.8
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 3.4e-82 309.7 405 42.2
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 3.8e-81 306.2 391 44.5
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 6.4e-81 305.4 371 43.9
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.2e-79 301.2 399 39.8
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 4.6e-79 299.3 414 41.8
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 7.4e-77 292.0 211 66.4
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 4.8e-68 262.7 178 64.6
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 3.3e-61 240.0 230 55.2
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 3.3e-61 240.0 221 55.2
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 3.9e-54 216.5 189 55.0
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.1e-53 214.9 200 52.5
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 7.7e-50 202.2 129 69.8
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.4e-48 198.0 120 70.0
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.0e-46 191.8 301 40.5
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.4e-46 191.4 137 66.4
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 9.7e-45 185.3 314 36.3
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 2.2e-36 157.5 97 69.1
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 1.0e-30 138.7 107 56.1
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 3.1e-27 127.1 96 57.3
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 6.1e-23 112.8 124 44.4
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 1.2e-18 98.6 107 47.7
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 6.8e-14 82.8 131 37.4
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 8.9e-14 82.4 88 48.9
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 2.0e-10 71.2 41 75.6
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 5.0e-09 66.6 67 56.7


User provided reference genes

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