Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g084490.1 Solanum lycopersicum HOM05D003450 ORTHO05D004150 4.0e-243 844.3 434 100.0
Peaxi162Scf00074g01921 Petunia axillaris HOM05D003450 ORTHO05D004150 4.2e-147 525.4 412 67.5
Sopen08g029730 Solanum pennellii HOM05D003450 ORTHO05D004150 5.4e-147 525.0 412 68.2
CAN.G532.15 Capsicum annuum HOM05D003450 ORTHO05D004150 7.1e-147 524.6 412 67.7
Nitab4.5_0006540g0050 Nicotiana tabacum HOM05D003450 ORTHO05D004150 3.3e-144 515.8 412 66.7
Nitab4.5_0002282g0060 Nicotiana tabacum HOM05D003450 ORTHO05D004150 2.8e-143 512.7 412 66.7
Dinv37611 Davidia involucrata HOM05D003450 ORTHO05D004150 3.4e-133 479.2 412 61.7
Haze_14757 Corylus avellana HOM05D003450 ORTHO05D004150 6.0e-130 468.4 420 58.8
CSS0002385 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.0e-129 467.6 420 59.0
Cfa007340 Carpinus fangiana HOM05D003450 ORTHO05D004150 5.1e-129 465.3 420 58.6
Atru.chr6.2426 Acer truncatum HOM05D003450 ORTHO05D004150 1.1e-128 464.2 420 58.6
Thecc.04G019300 Theobroma cacao HOM05D003450 ORTHO05D004150 4.3e-128 462.2 412 59.2
QL02p074015 Quercus lobata HOM05D003450 ORTHO05D004150 5.6e-128 461.8 412 59.5
GSVIVG01000649001 Vitis vinifera HOM05D003450 ORTHO05D004150 5.6e-128 461.8 413 59.3
Manes.17G111200 Manihot esculenta HOM05D003450 ORTHO05D004150 7.4e-128 461.5 420 58.6
CiPaw.09G022500 Carya illinoinensis HOM05D003450 ORTHO05D004150 1.3e-127 460.7 420 59.0
QL03p035003 Quercus lobata HOM05D003450 ORTHO05D004150 2.8e-127 459.5 412 59.0
Duzib147G0628 Durio zibethinus HOM05D003450 ORTHO05D004150 3.7e-127 459.1 412 58.3
MD17G1022800 Malus domestica HOM05D003450 ORTHO05D004150 6.2e-127 458.4 412 59.5
Hma1.2p1_1172F.1_g263680 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 1.1e-126 457.6 421 58.7
Hma1.2p1_1136F.1_g260470 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 1.4e-126 457.2 421 58.7
Eucgr.I01732 Eucalyptus grandis HOM05D003450 ORTHO05D004150 1.8e-126 456.8 412 59.0
Potri.001G343500 Populus trichocarpa HOM05D003450 ORTHO05D004150 2.4e-126 456.4 412 58.0
TWI56G0323 Tripterygium wilfordii HOM05D003450 ORTHO05D004150 4.0e-126 455.7 420 57.6
Gohir.D04G058400 Gossypium hirsutum HOM05D003450 ORTHO05D004150 9.0e-126 454.5 412 57.5
Gorai.012G065100 Gossypium raimondii HOM05D003450 ORTHO05D004150 9.0e-126 454.5 412 57.5
MD09G1023300 Malus domestica HOM05D003450 ORTHO05D004150 1.2e-125 454.1 412 58.7
Nn2g10559 Nelumbo nucifera HOM05D003450 ORTHO05D004150 2.6e-125 453.0 420 56.4
Sabra16G0222800 Salix brachista HOM05D003450 ORTHO05D004150 2.6e-125 453.0 412 57.5
MELO3C021591.2 Cucumis melo HOM05D003450 ORTHO05D004150 3.4e-125 452.6 420 57.9
CsaV3_5G027040 Cucumis sativus L. HOM05D003450 ORTHO05D004150 8.4e-124 448.0 420 56.7
Sed0014883 Sechium edule HOM05D003450 ORTHO05D004150 1.1e-123 447.6 420 56.9
TAR623G1303 Trochodendron aralioides HOM05D003450 ORTHO05D004150 2.5e-123 446.4 412 57.3
RcHm_v2.0_Chr2g0173241 Rosa chinensis HOM05D003450 ORTHO05D004150 4.2e-123 445.7 412 58.3
Ciclev10014189m.g Citrus clementina HOM05D003450 ORTHO05D004150 5.5e-123 445.3 420 57.1
Sed0008503 Sechium edule HOM05D003450 ORTHO05D004150 5.5e-123 445.3 420 56.7
Prupe.3G293600 Prunus persica HOM05D003450 ORTHO05D004150 7.1e-123 444.9 412 58.3
PGR142G3144 Punica granatum HOM05D003450 ORTHO05D004150 7.1e-123 444.9 412 58.3
FvH4_6g51710 Fragaria vesca HOM05D003450 ORTHO05D004150 9.3e-123 444.5 412 57.5
FAN05G3254 Fragaria x ananassa HOM05D003450 ORTHO05D004150 9.3e-123 444.5 412 58.0
FAN14G2265 Fragaria x ananassa HOM05D003450 ORTHO05D004150 9.3e-123 444.5 412 57.5
Cc08_g15080 Coffea canephora HOM05D003450 ORTHO05D004150 2.7e-122 443.0 412 56.8
Glyma.19G056700 Glycine max HOM05D003450 ORTHO05D004150 3.5e-122 442.6 412 57.5
Migut.E01197 Erythranthe guttata HOM05D003450 ORTHO05D004150 4.6e-122 442.2 412 56.1
Oeu042349.1 Olea europaea HOM05D003450 ORTHO05D004150 1.0e-121 441.0 412 57.0
Manes.15G151800 Manihot esculenta HOM05D003450 ORTHO05D004150 1.8e-121 440.3 381 59.3
Actinidia14585 Actinidia chinensis HOM05D003450 ORTHO05D004150 2.3e-121 439.9 420 55.5
SGA_v2.0_scaffold76G25156 Striga asiatica HOM05D003450 ORTHO05D004150 2.3e-121 439.9 413 56.7
MSTRG.11963 Avicennia marina HOM05D003450 ORTHO05D004150 5.1e-121 438.7 412 56.8
AUR62009512 Chenopodium quinoa HOM05D003450 ORTHO05D004150 5.1e-121 438.7 412 54.9
vmacro11398 Vaccinium macrocarpon HOM05D003450 ORTHO05D004150 8.7e-121 438.0 496 50.8
CANSAT64G2043 Cannabis sativa HOM05D003450 ORTHO05D004150 1.9e-120 436.8 412 55.6
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 4.3e-120 435.6 412 57.0
Ca_04147_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 2.1e-119 433.3 414 56.0
Ca_30596_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 2.1e-119 433.3 414 56.0
DCAR_004619 Daucus carota HOM05D003450 ORTHO05D004150 2.1e-119 433.3 412 56.8
Lj2g0026665 Lotus japonicus HOM05D003450 ORTHO05D004150 6.2e-119 431.8 412 57.3
THA.LOC104825318 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 6.2e-119 431.8 412 55.6
ClCG09G019370 Citrullus lanatus HOM05D003450 ORTHO05D004150 1.1e-118 431.0 420 56.4
ECA246G5325 Erigeron canadensis HOM05D003450 ORTHO05D004150 4.0e-118 429.1 412 56.1
Lsat_1_v5_gn_3_9121 Lactuca sativa HOM05D003450 ORTHO05D004150 5.3e-118 428.7 416 56.5
Glyma.19G003200 Glycine max HOM05D003450 ORTHO05D004150 6.9e-118 428.3 414 55.6
AUR62034774 Chenopodium quinoa HOM05D003450 ORTHO05D004150 9.0e-118 427.9 407 54.3
SalBow8G1997 Salvia bowleyana HOM05D003450 ORTHO05D004150 9.0e-118 427.9 415 55.7
Lalb_Chr18g0055341 Lupinus albus HOM05D003450 ORTHO05D004150 2.0e-117 426.8 412 56.3
Sc07g0005180 Simmondsia chinensis HOM05D003450 ORTHO05D004150 2.0e-117 426.8 412 54.9
Hund15478 Selenicereus undatus HOM05D003450 ORTHO05D004150 4.5e-117 425.6 412 54.4
THA.LOC104823952 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 5.8e-117 425.2 418 55.3
TPR.G31948 Trifolium pratense HOM05D003450 ORTHO05D004150 1.7e-116 423.7 414 54.8
Lalb_Chr15g0086731 Lupinus albus HOM05D003450 ORTHO05D004150 6.5e-116 421.8 412 56.1
Psat1g053760 Pisum sativum HOM05D003450 ORTHO05D004150 1.4e-115 420.6 414 54.6
CARHR148900 Cardamine hirsuta HOM05D003450 ORTHO05D004150 2.5e-115 419.9 412 54.9
C07p36640 Brassica napus HOM05D003450 ORTHO05D004150 4.2e-115 419.1 412 54.9
Phvul.004G005200 Phaseolus vulgaris HOM05D003450 ORTHO05D004150 4.2e-115 419.1 414 53.9
BcaC06g33806 Brassica carinata HOM05D003450 ORTHO05D004150 5.5e-115 418.7 412 54.9
BolC7t44182H Brassica oleracea HOM05D003450 ORTHO05D004150 5.5e-115 418.7 412 54.9
Ah.02g116930 Amaranthus hybridus HOM05D003450 ORTHO05D004150 7.1e-115 418.3 412 52.4
Aqoxy6G00591 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 7.1e-115 418.3 412 53.6
Medtr6g004510 Medicago truncatula HOM05D003450 ORTHO05D004150 7.1e-115 418.3 414 54.3
A06p41100 Brassica napus HOM05D003450 ORTHO05D004150 1.2e-114 417.5 412 54.6
C02p54300 Brassica napus HOM05D003450 ORTHO05D004150 1.2e-114 417.5 412 54.4
BolC2t11498H Brassica oleracea HOM05D003450 ORTHO05D004150 1.2e-114 417.5 412 54.4
BraA06t27033Z Brassica rapa HOM05D003450 ORTHO05D004150 1.2e-114 417.5 412 54.6
ECA233G1844 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.2e-114 417.5 412 54.9
Duzib264G1290 Durio zibethinus HOM05D003450 ORTHO05D004150 1.6e-114 417.2 352 61.6
PSO063G0895 Papaver somniferum HOM05D003450 ORTHO05D004150 2.1e-114 416.8 413 54.0
PSO421G0225 Papaver somniferum HOM05D003450 ORTHO05D004150 3.5e-114 416.0 413 54.0
VMungo0464G1019 Vigna mungo HOM05D003450 ORTHO05D004150 4.6e-114 415.6 414 53.4
BcaC06g30980 Brassica carinata HOM05D003450 ORTHO05D004150 6.1e-114 415.2 412 54.1
Aa31LG2G5130 Aethionema arabicum HOM05D003450 ORTHO05D004150 1.0e-113 414.5 413 55.0
A02p35530 Brassica napus HOM05D003450 ORTHO05D004150 3.0e-113 412.9 412 53.9
BraA02t08553Z Brassica rapa HOM05D003450 ORTHO05D004150 3.0e-113 412.9 412 53.9
HanXRQChr17g0533281 Helianthus annuus HOM05D003450 ORTHO05D004150 5.1e-113 412.1 412 54.9
SalBow8G1100 Salvia bowleyana HOM05D003450 ORTHO05D004150 1.1e-112 411.0 412 54.1
BcaB07g30154 Brassica carinata HOM05D003450 ORTHO05D004150 1.9e-112 410.2 412 54.4
MBI14_g36922_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 4.3e-112 409.1 414 53.4
Solyc08g081410.3 Solanum lycopersicum HOM05D003450 ORTHO05D004150 2.2e-111 406.8 412 56.1
BcaC03g17471 Brassica carinata HOM05D003450 ORTHO05D004150 6.3e-111 405.2 413 53.5
unitig_61.g26360 Utricularia gibba HOM05D003450 ORTHO05D004150 3.1e-110 402.9 427 51.3
CDE09G0700 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 2.0e-109 400.2 414 49.3
CAN.G1274.36 Capsicum annuum HOM05D003450 ORTHO05D004150 3.4e-109 399.4 438 54.8
FAN09G1073 Fragaria x ananassa HOM05D003450 ORTHO05D004150 4.5e-109 399.1 412 53.9
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 7.7e-109 398.3 415 51.1
CDE02G4242 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 2.9e-108 396.4 414 48.6
Thhalv10003626m.g Eutrema salsugineum HOM05D003450 ORTHO05D004150 1.1e-107 394.4 412 52.2
Carub.0005s0596 Capsella rubella HOM05D003450 ORTHO05D004150 1.9e-107 393.7 412 52.4
FAN02G3092 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.5e-107 393.3 422 52.4
AL5G16950 Arabidopsis lyrata HOM05D003450 ORTHO05D004150 7.2e-107 391.7 412 51.7
arahy.Tifrunner.gnm1.ann1.Q7XHAR Arachis hypogaea HOM05D003450 ORTHO05D004150 1.2e-106 391.0 426 51.9
Sp2g16700 Schrenkiella parvula HOM05D003450 ORTHO05D004150 2.1e-106 390.2 412 51.7
CSS0005577 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.8e-105 387.1 427 52.7
AT3G27530 Arabidopsis thaliana HOM05D003450 ORTHO05D004150 3.0e-105 386.3 412 51.5
EL10Ac5g11313 Beta vulgaris HOM05D003450 ORTHO05D004150 1.5e-104 384.0 352 55.4
arahy.Tifrunner.gnm1.ann1.F3BVF1 Arachis hypogaea HOM05D003450 ORTHO05D004150 4.8e-103 379.0 412 51.5
HPP92_017150 Vanilla planifolia HOM05D003450 ORTHO05D004150 4.8e-103 379.0 413 48.9
Lj8A217T73 Lonicera japonica HOM05D003450 ORTHO05D004150 1.8e-102 377.1 421 50.6
HPP92_017154 Vanilla planifolia HOM05D003450 ORTHO05D004150 9.1e-102 374.8 413 49.2
Lj5C248G9 Lonicera japonica HOM05D003450 ORTHO05D004150 2.0e-101 373.6 412 51.0
Os12g0538900 Oryza sativa ssp. japonica HOM05D003450 ORTHO05D004150 2.6e-101 373.2 414 48.6
COL.COLO4_29171 Corchorus olitorius HOM05D003450 ORTHO05D004150 7.2e-99 365.2 412 50.0
PSO210G4892 Papaver somniferum HOM05D003450 ORTHO05D004150 9.7e-96 354.8 414 47.8
PSO210G3071 Papaver somniferum HOM05D003450 ORTHO05D004150 9.1e-94 348.2 414 47.3
Mapoly0097s0078 Marchantia polymorpha HOM05D003450 ORTHO05D004150 2.6e-88 330.1 414 44.0
Pp3c3_27420 Physcomitrium patens HOM05D003450 ORTHO05D004150 2.4e-86 323.6 415 42.2
Hund02491 Selenicereus undatus HOM05D003450 ORTHO05D004150 9.1e-86 321.6 352 50.9
CSS0024266 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 3.5e-85 319.7 456 45.0
AagrBONN_evm.TU.Sc2ySwM_344.991 Anthoceros agrestis HOM05D003450 ORTHO05D004150 1.0e-84 318.2 393 43.5
SMO367G1196 Selaginella moellendorffii HOM05D003450 ORTHO05D004150 6.8e-81 305.4 411 41.8
Zm00001eb410430 Zea mays HOM05D003450 ORTHO05D004150 6.3e-79 298.9 414 43.7
CSS0048429 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.9e-75 287.3 417 45.8
Actinidia28359 Actinidia chinensis HOM05D003450 ORTHO05D004150 1.9e-67 260.8 382 42.7
Dinv38912 Davidia involucrata HOM05D003450 ORTHO05D004150 1.2e-50 204.9 208 54.8
CBR_g57070 Chara braunii HOM05D003450 ORTHO05D004150 4.7e-50 203.0 463 31.7
Gohir.A05G354750 Gossypium hirsutum HOM05D003450 ORTHO05D004150 3.1e-49 200.3 215 52.6
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 5.2e-49 199.5 195 54.9
C02p55220 Brassica napus HOM05D003450 ORTHO05D004150 1.1e-46 191.8 355 39.2
Gohir.A05G354700 Gossypium hirsutum HOM05D003450 ORTHO05D004150 4.6e-45 186.4 142 62.0
BolC2t11570H Brassica oleracea HOM05D003450 ORTHO05D004150 5.8e-40 169.5 317 37.5
MCO05G130 Micromonas commoda HOM05D003450 ORTHO05D004150 1.3e-36 158.3 433 28.9
Zm00001eb137680 Zea mays HOM05D003450 ORTHO05D004150 2.0e-32 144.4 141 50.4
BcaC03g17544 Brassica carinata HOM05D003450 ORTHO05D004150 2.7e-29 134.0 278 38.5
arahy.Tifrunner.gnm1.ann1.ST064T Arachis hypogaea HOM05D003450 ORTHO05D004150 1.0e-28 132.1 237 42.2
Zm00001eb137620 Zea mays HOM05D003450 ORTHO05D004150 9.6e-27 125.6 155 46.5
Cre06.g271950 Chlamydomonas reinhardtii HOM05D003450 ORTHO05D004150 1.3e-26 125.2 224 34.4
SEGI_37208 Sequoiadendron giganteum HOM05D003450 ORTHO05D004150 4.8e-26 123.2 154 45.5
Cfa023435 Carpinus fangiana HOM05D003450 ORTHO05D125710 9.0e-25 119.0 240 34.2
Prupe.3G293500 Prunus persica HOM05D003450 ORTHO05D004150 1.1e-19 102.1 107 52.3
PRCOL_00005576 Prasinoderma coloniale HOM05D003450 ORTHO05D004150 2.5e-19 100.9 424 26.7
TPR.G33285 Trifolium pratense HOM05D003450 ORTHO05D004150 1.9e-14 84.7 58 69.0
Hma1.2p1_1136F.1_g260480 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 6.7e-12 76.3 49 71.4
CSS0021042 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 6.2e-10 69.7 72 52.8
Zm00001eb128800 Zea mays HOM05D003450 ORTHO05D004150 1.8e-09 68.2 87 41.4
arahy.Tifrunner.gnm1.ann1.CAW9WT Arachis hypogaea HOM05D003450 ORTHO05D026894 4.5e-08 63.5 91 44.0
arahy.Tifrunner.gnm1.ann1.F4W2B8 Arachis hypogaea HOM05D003450 ORTHO05D004150 5.8e-08 63.2 92 43.5


User provided reference genes

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