Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g084430.3 Solanum lycopersicum HOM05D000578 ORTHO05D000422 9.8e-21 102.4 49 100.0
Sopen02g029130 Solanum pennellii HOM05D000578 ORTHO05D000422 9.8e-21 102.4 49 100.0
PGSC0003DMG400003625 Solanum tuberosum HOM05D000578 ORTHO05D000422 4.6e-18 93.6 49 89.8
CAN.G1505.15 Capsicum annuum HOM05D000578 ORTHO05D000422 1.9e-16 88.2 47 83.0
Nitab4.5_0012660g0030 Nicotiana tabacum HOM05D000578 ORTHO05D000422 8.3e-12 72.8 42 73.8
Nitab4.5_0012714g0010 Nicotiana tabacum HOM05D000578 ORTHO05D000422 2.4e-11 71.2 42 71.4
MD02G1110700 Malus domestica HOM05D000578 ORTHO05D000422 1.0e-09 65.9 48 66.7
Prupe.7G165700 Prunus persica HOM05D000578 ORTHO05D000422 1.3e-09 65.5 48 66.7
FvH4_1g12110 Fragaria vesca HOM05D000578 ORTHO05D000422 3.9e-09 63.9 48 60.4
FAN26G3156 Fragaria x ananassa HOM05D000578 ORTHO05D000422 3.9e-09 63.9 48 60.4
FAN28G1153 Fragaria x ananassa HOM05D000578 ORTHO05D000422 3.9e-09 63.9 48 60.4
COL.COLO4_21956 Corchorus olitorius HOM05D003780 ORTHO05D004463 6.6e-09 63.2 44 65.9
RcHm_v2.0_Chr2g0099771 Rosa chinensis HOM05D000578 ORTHO05D000422 6.6e-09 63.2 48 60.4
FAN19G2480 Fragaria x ananassa HOM05D000578 ORTHO05D000422 1.1e-08 62.4 48 58.3
MD15G1248300 Malus domestica HOM05D000578 ORTHO05D000422 1.1e-08 62.4 48 64.6
GSVIVG01018818001 Vitis vinifera HOM05D000578 ORTHO05D000422 1.5e-08 62.0 46 63.0
Nn5g29231 Nelumbo nucifera HOM05D000578 ORTHO05D000422 1.9e-08 61.6 45 62.2
Thecc.02G075400 Theobroma cacao HOM05D000578 ORTHO05D000422 1.9e-08 61.6 44 63.6
Cc07_g10470 Coffea canephora HOM05D000578 ORTHO05D000422 2.5e-08 61.2 47 61.7
Cfa006948 Carpinus fangiana HOM05D000578 ORTHO05D000422 4.3e-08 60.5 45 66.7
Haze_03804 Corylus avellana HOM05D000578 ORTHO05D000422 4.3e-08 60.5 45 64.4
Peaxi162Scf00083g01217 Petunia axillaris HOM05D000578 ORTHO05D000422 4.3e-08 60.5 47 57.4
TAR381G0097 Trochodendron aralioides HOM05D000578 ORTHO05D000422 4.3e-08 60.5 45 62.2
Duzib052G0774 Durio zibethinus HOM05D000578 ORTHO05D000422 5.6e-08 60.1 44 61.4
FAN23G1112 Fragaria x ananassa HOM05D000578 ORTHO05D000422 5.6e-08 60.1 48 58.3
Thecc.01G022500 Theobroma cacao HOM05D000578 ORTHO05D000422 5.6e-08 60.1 46 60.9
Dinv40063 Davidia involucrata HOM05D000578 ORTHO05D000422 7.3e-08 59.7 44 65.9
Duzib147G0457 Durio zibethinus HOM05D000578 ORTHO05D000422 7.3e-08 59.7 44 68.2
Cfa005101 Carpinus fangiana HOM05D000578 ORTHO05D000422 1.2e-07 58.9 44 59.1
Haze_02250 Corylus avellana HOM05D000578 ORTHO05D000422 1.2e-07 58.9 44 61.4
Haze_02258 Corylus avellana HOM05D000578 ORTHO05D000422 1.2e-07 58.9 44 61.4
Dinv23456 Davidia involucrata HOM05D000578 ORTHO05D000422 1.2e-07 58.9 46 58.7
COL.COLO4_26042 Corchorus olitorius HOM05D000578 ORTHO05D000422 2.8e-07 57.8 47 61.7
CiPaw.07G056400 Carya illinoinensis HOM05D000578 ORTHO05D000422 6.2e-07 56.6 43 60.5
Duzib187G0552 Durio zibethinus HOM05D000578 ORTHO05D000422 6.2e-07 56.6 46 58.7
Gohir.A11G177500 Gossypium hirsutum HOM05D000578 ORTHO05D000422 8.1e-07 56.2 46 58.7
Gohir.D11G185300 Gossypium hirsutum HOM05D000578 ORTHO05D000422 8.1e-07 56.2 46 58.7
TWI73G0396 Tripterygium wilfordii HOM05D000578 ORTHO05D000422 8.1e-07 56.2 47 55.3
QL06p033894 Quercus lobata HOM05D000578 ORTHO05D000422 1.1e-06 55.8 48 58.3
Duzib264G0769 Durio zibethinus HOM05D000578 ORTHO05D000422 1.4e-06 55.5 46 56.5
Sabra09G0095500 Salix brachista HOM05D000578 ORTHO05D000422 1.4e-06 55.5 45 53.3
Ciclev10029284m.g Citrus clementina HOM05D000578 ORTHO05D000422 1.8e-06 55.1 45 62.2
Manes.11G082100 Manihot esculenta HOM05D000578 ORTHO05D000422 1.8e-06 55.1 46 54.3
Ca_24900_v3 Cicer arietinum L. HOM05D000578 ORTHO05D000422 3.1e-06 54.3 44 56.8
Gorai.007G196900 Gossypium raimondii HOM05D000578 ORTHO05D000422 3.1e-06 54.3 46 56.5
TWI09G0396 Tripterygium wilfordii HOM05D000578 ORTHO05D000422 3.1e-06 54.3 47 55.3
Glyma.12G037200 Glycine max HOM05D000578 ORTHO05D000422 4.0e-06 53.9 46 54.3
CSS0010356 Camellia sinensis var. sinensis HOM05D000578 ORTHO05D000422 5.2e-06 53.5 44 59.1
CSS0010731 Camellia sinensis var. sinensis HOM05D000578 ORTHO05D000422 5.2e-06 53.5 44 59.1
ClCG07G008310 Citrullus lanatus HOM05D000578 ORTHO05D000422 5.2e-06 53.5 47 57.4
CsaV3_4G005810 Cucumis sativus L. HOM05D000578 ORTHO05D000422 8.9e-06 52.8 47 57.4
Eucgr.I02368 Eucalyptus grandis HOM05D000578 ORTHO05D000422 8.9e-06 52.8 45 60.0
Gohir.A12G060900 Gossypium hirsutum HOM05D000578 ORTHO05D000422 8.9e-06 52.8 48 56.2


User provided reference genes

Program Settings