Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g084113.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 1.1e-107 393.3 194 100.0
Sopen02g028880 Solanum pennellii HOM05D010460 ORTHO05D037645 7.1e-22 108.2 165 40.6
Sopen02g012350 Solanum pennellii HOM05D010460 ORTHO05D014683 1.9e-19 100.1 76 65.8
Sopen02g012330 Solanum pennellii HOM05D010460 ORTHO05D003043 7.3e-19 98.2 76 65.8
Sopen02g012320 Solanum pennellii HOM05D010460 ORTHO05D014683 9.6e-19 97.8 76 64.5
Solyc00g007350.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 1.2e-18 97.4 76 65.8
Solyc00g012540.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 3.6e-18 95.9 75 65.3
Sopen02g012300 Solanum pennellii HOM05D010460 ORTHO05D010130 3.1e-17 92.8 76 64.5
Solyc00g284510.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 6.4e-15 85.1 65 67.7
Sopen02g012220 Solanum pennellii HOM05D010460 ORTHO05D014683 1.9e-14 83.6 76 60.5
Solyc02g084080.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 3.2e-14 82.8 65 64.6
PGSC0003DMG400003556 Solanum tuberosum HOM05D002848 ORTHO05D003043 5.4e-14 82.0 60 65.0
Solyc00g007450.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 1.0e-12 77.8 59 69.5
Solyc00g198360.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 1.0e-12 77.8 59 69.5
Sopen02g012290 Solanum pennellii HOM05D010460 ORTHO05D014683 1.1e-09 67.8 76 52.6
PGSC0003DMG400003555 Solanum tuberosum HOM05D002848 ORTHO05D030274 7.6e-08 61.6 60 48.3
Nitab4.5_0003247g0050 Nicotiana tabacum HOM05D001465 ORTHO05D001434 9.9e-08 61.2 42 76.2
Nitab4.5_0005164g0010 Nicotiana tabacum HOM05D001465 ORTHO05D001434 9.9e-08 61.2 42 76.2
Solyc01g102990.3 Solanum lycopersicum HOM05D001465 ORTHO05D001434 9.9e-08 61.2 42 76.2
CAN.G855.56 Capsicum annuum HOM05D001465 ORTHO05D001434 2.2e-07 60.1 42 73.8
Peaxi162Scf00011g01923 Petunia axillaris HOM05D001465 ORTHO05D001434 2.2e-07 60.1 42 73.8
Solyc02g084170.2 Solanum lycopersicum HOM05D003404 ORTHO05D392787 2.2e-07 60.1 68 51.5
Solyc02g084200.3 Solanum lycopersicum HOM05D002848 ORTHO05D003043 2.2e-07 60.1 60 46.7
Sopen01g045400 Solanum pennellii HOM05D001465 ORTHO05D001434 2.2e-07 60.1 42 73.8
CAN.G1671.1 Capsicum annuum HOM05D002848 ORTHO05D003043 3.8e-07 59.3 89 39.3
Actinidia01640 Actinidia chinensis HOM05D001465 ORTHO05D001434 2.4e-06 56.6 42 69.0
Rhsim05G0115100 Rhododendron simsii HOM05D001465 ORTHO05D001434 4.2e-06 55.8 42 69.0
Solyc02g038790.3 Solanum lycopersicum HOM05D010460 ORTHO05D014683 4.2e-06 55.8 71 45.1
CAN.G724.40 Capsicum annuum HOM05D002848 ORTHO05D003043 5.4e-06 55.5 76 42.1
Hma1.2p1_0052F.1_g030030 Hydrangea macrophylla HOM05D001465 ORTHO05D001434 5.4e-06 55.5 42 66.7
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 5.4e-06 55.5 42 66.7
Solyc02g084160.3 Solanum lycopersicum HOM05D010460 ORTHO05D003043 5.4e-06 55.5 48 56.2
CSS0046889 Camellia sinensis var. sinensis HOM05D001465 ORTHO05D001434 9.3e-06 54.7 42 66.7
Cc02_g23740 Coffea canephora HOM05D001465 ORTHO05D001434 9.3e-06 54.7 42 66.7
Lsat_1_v5_gn_9_124900 Lactuca sativa HOM05D001465 ORTHO05D001434 9.3e-06 54.7 42 66.7
Nitab4.5_0005721g0090 Nicotiana tabacum HOM05D002848 ORTHO05D003043 9.3e-06 54.7 70 35.7


User provided reference genes

Program Settings