Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g083920.1 Solanum lycopersicum HOM05D002661 ORTHO05D002786 2.3e-64 248.8 131 100.0
Sopen02g028700 Solanum pennellii HOM05D002661 ORTHO05D002786 2.8e-54 215.3 134 89.6
PGSC0003DMG400003639 Solanum tuberosum HOM05D002661 ORTHO05D002786 8.1e-38 160.6 138 73.9
CAN.G1671.11 Capsicum annuum HOM05D002661 ORTHO05D002786 4.5e-28 128.3 146 59.6
Nitab4.5_0003271g0010 Nicotiana tabacum HOM05D002661 ORTHO05D002786 4.6e-25 118.2 139 62.6
Peaxi162Scf00083g00420 Petunia axillaris HOM05D002661 ORTHO05D002786 1.3e-24 116.7 145 61.4
Peaxi162Scf00083g00513 Petunia axillaris HOM05D002661 ORTHO05D002786 1.3e-24 116.7 145 61.4
Nitab4.5_0006286g0080 Nicotiana tabacum HOM05D002661 ORTHO05D002786 6.7e-24 114.4 143 60.8
PGSC0003DMG400022533 Solanum tuberosum HOM05D002661 ORTHO05D002786 1.9e-23 112.8 140 56.4
Sopen03g006340 Solanum pennellii HOM05D002661 ORTHO05D002786 2.5e-23 112.5 140 56.4
Solyc03g033550.3 Solanum lycopersicum HOM05D002661 ORTHO05D002786 2.8e-22 109.0 140 55.0
CAN.G1735.2 Capsicum annuum HOM05D002661 ORTHO05D002786 1.4e-21 106.7 139 56.1
Nitab4.5_0006119g0020 Nicotiana tabacum HOM05D002661 ORTHO05D002786 7.1e-18 94.4 135 54.1
Nitab4.5_0000438g0050 Nicotiana tabacum HOM05D002661 ORTHO05D002786 7.9e-17 90.9 133 54.9
vmacro21919 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 4.3e-15 85.1 134 47.0
Peaxi162Scf00034g02717 Petunia axillaris HOM05D002661 ORTHO05D002786 3.7e-14 82.0 136 47.8
Dinv40084 Davidia involucrata HOM05D002661 ORTHO05D002786 6.3e-14 81.3 133 48.1
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 1.4e-13 80.1 131 42.7
COL.COLO4_21913 Corchorus olitorius HOM05D002661 ORTHO05D002786 2.0e-12 76.3 129 43.4
MSTRG.2712 Avicennia marina HOM05D002661 ORTHO05D002786 1.0e-11 73.9 121 41.3
CSS0007330 Camellia sinensis var. sinensis HOM05D002661 ORTHO05D002786 1.0e-11 73.9 132 45.5
Oeu005316.1 Olea europaea HOM05D002661 ORTHO05D002786 1.7e-11 73.2 134 45.5
MBI05_g15357_MAGBIO Magnolia biondii HOM05D002661 ORTHO05D002786 2.2e-11 72.8 129 39.5
Aqoxy4G02812 Aquilegia oxysepala HOM05D002661 ORTHO05D002786 3.8e-11 72.0 129 39.5
Cfa006970 Carpinus fangiana HOM05D002668 ORTHO05D003295 3.8e-11 72.0 129 41.9
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 8.4e-11 70.9 129 39.5
Hma1.2p1_0956F.1_g241360 Hydrangea macrophylla HOM05D002661 ORTHO05D002786 1.4e-10 70.1 134 44.0
Psat2g154760 Pisum sativum HOM05D002661 ORTHO05D002786 1.9e-10 69.7 131 39.7
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 2.5e-10 69.3 130 40.0
Cfa013943 Carpinus fangiana HOM05D002661 ORTHO05D002786 5.5e-10 68.2 131 39.7
Phvul.009G016600 Phaseolus vulgaris HOM05D002661 ORTHO05D002786 7.2e-10 67.8 131 34.4
Nn5g30157 Nelumbo nucifera HOM05D002661 ORTHO05D002786 9.3e-10 67.4 132 37.9
CiPaw.08G131700 Carya illinoinensis HOM05D002661 ORTHO05D002786 1.2e-09 67.0 131 38.2
TWI73G0139 Tripterygium wilfordii HOM05D002661 ORTHO05D002786 1.6e-09 66.6 137 40.1
Cpa.g.sc6.246 Carica papaya HOM05D002661 ORTHO05D002786 2.1e-09 66.2 130 40.0
DCAR_013866 Daucus carota HOM05D002661 ORTHO05D002786 2.1e-09 66.2 131 35.1
SalBow3G1681 Salvia bowleyana HOM05D002661 ORTHO05D002786 4.6e-09 65.1 93 46.2
PSO675G6292 Papaver somniferum HOM05D002661 ORTHO05D002786 6.1e-09 64.7 138 39.9
Lsat_1_v5_gn_4_146600 Lactuca sativa HOM05D002661 ORTHO05D002786 1.3e-08 63.5 134 41.0
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 1.8e-08 63.2 128 38.3
Potri.002G023000 Populus trichocarpa HOM05D002661 ORTHO05D002786 2.3e-08 62.8 126 38.1
Peaxi162Scf00400g00048 Petunia axillaris HOM05D002661 ORTHO05D002786 3.0e-08 62.4 131 35.1
Lj4A218T51 Lonicera japonica HOM05D002661 ORTHO05D002786 5.1e-08 61.6 129 38.8
Peaxi162Scf00438g00717 Petunia axillaris HOM05D002661 ORTHO05D002786 5.1e-08 61.6 131 36.6
RcHm_v2.0_Chr2g0099471 Rosa chinensis HOM05D002661 ORTHO05D002786 5.1e-08 61.6 129 38.8
arahy.Tifrunner.gnm1.ann1.T25A5J Arachis hypogaea HOM05D002661 ORTHO05D002786 6.7e-08 61.2 130 34.6
Manes.02G104300 Manihot esculenta HOM05D002661 ORTHO05D002786 6.7e-08 61.2 138 42.0
Dinv39512 Davidia involucrata HOM05D002661 ORTHO05D002786 8.7e-08 60.8 126 37.3
FAN28G1441 Fragaria x ananassa HOM05D002661 ORTHO05D002786 8.7e-08 60.8 129 38.0
AUR62029460 Chenopodium quinoa HOM05D002661 ORTHO05D002786 1.5e-07 60.1 135 37.0
FAN26G1121 Fragaria x ananassa HOM05D002661 ORTHO05D002786 1.5e-07 60.1 129 38.8
CAN.G849.11 Capsicum annuum HOM05D002661 ORTHO05D002786 1.9e-07 59.7 38 78.9
Prupe.1G366100 Prunus persica HOM05D002661 ORTHO05D002786 1.9e-07 59.7 134 37.3
Sabra05G0184300 Salix brachista HOM05D002661 ORTHO05D002786 2.5e-07 59.3 126 36.5
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 3.3e-07 58.9 129 36.4
MD15G1245800 Malus domestica HOM05D002661 ORTHO05D002786 4.3e-07 58.5 140 36.4
Thecc.01G019200 Theobroma cacao HOM05D002661 ORTHO05D002786 4.3e-07 58.5 129 38.8
Duzib041G0251 Durio zibethinus HOM05D002661 ORTHO05D002786 5.7e-07 58.2 129 33.3
Psat5g013240 Pisum sativum HOM05D002661 ORTHO05D002786 5.7e-07 58.2 133 34.6
MSTRG.23411 Avicennia marina HOM05D002661 ORTHO05D002786 7.4e-07 57.8 120 36.7
THA.LOC104807494 Tarenaya hassleriana HOM05D002661 ORTHO05D002786 7.4e-07 57.8 143 38.5
arahy.Tifrunner.gnm1.ann1.TT5BBF Arachis hypogaea HOM05D002661 ORTHO05D002786 9.7e-07 57.4 134 35.1
GSVIVG01018786001 Vitis vinifera HOM05D002668 ORTHO05D003295 9.7e-07 57.4 90 43.3
Lalb_Chr14g0369851 Lupinus albus HOM05D002661 ORTHO05D002786 1.3e-06 57.0 127 31.5
FvH4_1g11870 Fragaria vesca HOM05D002661 ORTHO05D002786 1.6e-06 56.6 126 38.9
FAN19G2360 Fragaria x ananassa HOM05D002661 ORTHO05D002786 1.6e-06 56.6 129 38.0
HanXRQChr09g0256611 Helianthus annuus HOM05D002661 ORTHO05D002786 1.6e-06 56.6 136 40.4
TAR625G0479 Trochodendron aralioides HOM05D002661 ORTHO05D002786 1.6e-06 56.6 90 43.3
COL.COLO4_26155 Corchorus olitorius HOM05D002661 ORTHO05D002786 2.8e-06 55.8 129 32.6
AUR62003372 Chenopodium quinoa HOM05D002661 ORTHO05D002786 3.7e-06 55.5 137 32.1
CANSAT01G1513 Cannabis sativa HOM05D002661 ORTHO05D002786 4.8e-06 55.1 142 33.1
Cc07_g10690 Coffea canephora HOM05D002661 ORTHO05D002786 4.8e-06 55.1 139 38.1
MELO3C003756.2 Cucumis melo HOM05D002661 ORTHO05D002786 4.8e-06 55.1 133 34.6
Prupe.7G167800 Prunus persica HOM05D002668 ORTHO05D003295 4.8e-06 55.1 111 36.0
Lalb_Chr09g0321761 Lupinus albus HOM05D002661 ORTHO05D002786 8.2e-06 54.3 142 33.8


User provided reference genes

Program Settings