Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 7.5e-253 876.7 443 100.0
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 1.0e-249 866.3 443 98.9
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 2.7e-242 841.6 443 96.8
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 3.7e-236 821.2 444 94.4
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 1.9e-235 818.9 444 93.7
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 1.0e-233 813.1 443 93.0
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 2.2e-220 768.8 445 88.3
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 9.0e-206 720.3 443 82.6
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 2.6e-197 692.2 444 79.7
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 7.6e-197 690.6 446 78.9
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 2.2e-196 689.1 453 78.4
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 3.3e-192 675.2 450 76.4
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 9.6e-192 673.7 445 77.5
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 1.6e-191 672.9 420 81.0
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 2.1e-191 672.5 389 84.8
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 6.2e-191 671.0 378 86.5
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 2.4e-190 669.1 390 84.6
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 2.4e-190 669.1 445 76.6
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 3.1e-190 668.7 395 83.8
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 5.3e-190 667.9 418 78.5
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 9.0e-190 667.2 398 83.2
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 1.2e-189 666.8 392 83.7
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 1.2e-189 666.8 446 77.6
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 1.2e-189 666.8 440 76.8
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 2.0e-189 666.0 436 76.8
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 2.0e-189 666.0 400 82.8
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 2.6e-189 665.6 398 82.7
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 3.4e-189 665.2 386 83.9
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 4.5e-189 664.8 415 81.4
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 5.8e-189 664.5 440 75.7
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 1.0e-188 663.7 413 82.1
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 2.9e-188 662.1 398 82.7
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 2.9e-188 662.1 383 84.3
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 3.8e-188 661.8 423 79.4
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 3.8e-188 661.8 438 77.2
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 4.9e-188 661.4 446 75.3
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 6.5e-188 661.0 432 76.6
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 8.4e-188 660.6 443 75.4
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 8.4e-188 660.6 423 78.3
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 1.1e-187 660.2 407 80.8
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 1.4e-187 659.8 386 83.9
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 1.4e-187 659.8 438 76.7
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 1.4e-187 659.8 423 78.3
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 1.9e-187 659.4 395 82.8
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 2.5e-187 659.1 447 76.3
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 3.2e-187 658.7 434 76.7
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 3.2e-187 658.7 444 76.6
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 3.2e-187 658.7 387 83.5
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 4.2e-187 658.3 411 80.5
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 4.2e-187 658.3 479 73.1
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 2.7e-186 655.6 409 80.0
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 2.7e-186 655.6 409 80.0
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 2.7e-186 655.6 410 80.5
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 3.5e-186 655.2 442 75.8
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 4.6e-186 654.8 403 80.4
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 4.6e-186 654.8 388 82.0
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 7.9e-186 654.1 431 78.0
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 7.9e-186 654.1 442 75.6
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 1.0e-185 653.7 446 75.8
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 1.0e-185 653.7 421 77.4
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 1.0e-185 653.7 385 83.6
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 1.3e-185 653.3 401 80.8
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 1.3e-185 653.3 421 77.9
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 1.8e-185 652.9 395 81.3
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 1.8e-185 652.9 386 83.2
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 2.3e-185 652.5 441 75.7
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 6.7e-185 651.0 372 85.5
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 6.7e-185 651.0 442 75.6
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 6.7e-185 651.0 447 74.0
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 6.7e-185 651.0 388 83.8
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 8.7e-185 650.6 400 81.2
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 8.7e-185 650.6 400 81.2
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 8.7e-185 650.6 395 80.5
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 8.7e-185 650.6 435 76.1
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.9e-184 649.4 402 80.8
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 3.3e-184 648.7 395 80.3
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 7.4e-184 647.5 391 81.1
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 9.7e-184 647.1 390 82.1
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 9.7e-184 647.1 397 79.3
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 1.3e-183 646.7 394 79.7
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 1.3e-183 646.7 401 80.0
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 2.2e-183 646.0 386 82.1
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 2.8e-183 645.6 442 74.7
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 4.8e-183 644.8 442 74.2
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 4.8e-183 644.8 518 66.8
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.1e-182 643.7 416 78.4
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 2.4e-182 642.5 387 82.7
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 3.1e-182 642.1 391 80.6
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 6.9e-182 641.0 442 74.0
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 9.0e-182 640.6 416 76.0
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 9.0e-182 640.6 442 74.4
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 3.4e-181 638.6 375 83.7
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 3.4e-181 638.6 442 74.7
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 3.8e-180 635.2 391 80.6
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 9.4e-179 630.6 378 82.3
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 1.2e-178 630.2 384 80.5
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 2.1e-178 629.4 408 77.2
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 1.5e-176 623.2 366 83.1
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.7e-175 619.8 368 82.6
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 1.4e-174 616.7 442 69.7
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 5.3e-174 614.8 442 69.5
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 2.3e-169 599.4 388 74.7
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 4.4e-168 595.1 446 70.6
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 1.8e-166 589.7 386 73.6
CSS0012363 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 7.0e-166 587.8 328 87.2
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 4.5e-165 585.1 385 72.5
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 8.5e-164 580.9 364 75.8
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 3.3e-160 568.9 447 68.2
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 4.8e-159 565.1 373 75.6
Lsat_1_v5_gn_3_125660 Lactuca sativa HOM05D005052 ORTHO05D006226 1.7e-156 556.6 419 69.5
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 6.1e-154 548.1 404 68.8
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 1.8e-153 546.6 397 70.0
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 7.2e-147 524.6 374 68.7
Actinidia17421 Actinidia chinensis HOM05D005052 ORTHO05D006226 2.0e-144 516.5 287 87.5
EL10Ac6g15523 Beta vulgaris HOM05D005052 ORTHO05D006226 7.7e-141 504.6 454 59.0
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 3.8e-140 502.3 416 59.1
CDE04G1415 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 3.0e-137 492.7 287 81.9
Manes.02G107200 Manihot esculenta HOM05D005052 ORTHO05D006226 2.0e-133 479.9 325 74.8
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 2.3e-132 476.5 375 67.5
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 2.3e-129 466.5 378 60.1
Ah.03g149130 Amaranthus hybridus HOM05D005052 ORTHO05D006226 6.8e-129 464.9 273 84.2
SEGI_14262 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.7e-119 433.7 283 73.5
Dinv33661 Davidia involucrata HOM05D005052 ORTHO05D006226 1.8e-113 413.7 233 87.1
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 4.6e-109 399.1 450 52.9
CDE02G2775 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 6.6e-108 395.2 314 63.7
SEGI_08539 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 6.4e-95 352.1 224 73.7
CDE02G1558 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 1.2e-85 321.2 256 65.2
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 9.6e-83 311.6 243 64.6
Lsat_1_v5_gn_0_46241 Lactuca sativa HOM05D005052 ORTHO05D006226 7.9e-77 292.0 299 48.2
TPR.G6592 Trifolium pratense HOM05D005052 ORTHO05D006226 1.2e-72 278.1 273 57.1
RcHm_v2.0_Chr2g0099011 Rosa chinensis HOM05D005052 ORTHO05D006226 1.0e-71 275.0 246 58.5
unitig_699.g19702 Utricularia gibba HOM05D005052 ORTHO05D006226 2.9e-71 273.5 161 83.9
Haze_27270 Corylus avellana HOM05D005052 ORTHO05D006226 1.3e-68 264.6 355 43.9
Cfa024476 Carpinus fangiana HOM05D003566 ORTHO05D126353 1.8e-57 227.6 346 42.8
Dinv33662 Davidia involucrata HOM05D005052 ORTHO05D006226 9.1e-57 225.3 209 61.7
unitig_699.g19703 Utricularia gibba HOM05D005052 ORTHO05D006226 1.0e-52 211.8 177 67.2
Rhsim07G0143100 Rhododendron simsii HOM05D005052 ORTHO05D006226 2.3e-44 184.1 184 57.6
SEGI_40904 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 2.6e-43 180.6 113 77.0
Ah.03g149140 Amaranthus hybridus HOM05D000441 ORTHO05D000340 1.8e-28 131.3 95 69.5
SEGI_17140 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 9.8e-27 125.6 83 72.3
SEGI_34573 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 9.8e-27 125.6 83 72.3
MD02G1126200 Malus domestica HOM05D005052 ORTHO05D006226 9.1e-25 119.0 137 50.4
MD14G1099300 Malus domestica HOM05D005052 ORTHO05D006226 9.1e-25 119.0 137 50.4
Rhsim07G0135500 Rhododendron simsii HOM05D005052 ORTHO05D006226 6.1e-21 106.3 71 70.4
DCAR_004721 Daucus carota HOM05D005052 ORTHO05D006226 6.8e-20 102.8 113 52.2
SEGI_22853 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 2.6e-19 100.9 69 68.1
CDE04G1456 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 3.4e-19 100.5 73 61.6
Rhsim07G0135600 Rhododendron simsii HOM05D005052 ORTHO05D339393 1.6e-08 65.1 37 75.7
CSS0040013 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 5.6e-06 56.6 116 36.2


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