Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g082590.3 Solanum lycopersicum HOM05D006716 ORTHO05D008396 6.8e-139 497.3 243 100.0
Sopen02g027280 Solanum pennellii HOM05D006716 ORTHO05D008396 7.8e-127 457.2 234 96.2
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 2.4e-88 329.3 246 67.9
Nitab4.5_0007530g0040 Nicotiana tabacum HOM05D006716 ORTHO05D008396 6.0e-87 324.7 247 68.4
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 3.9e-78 295.4 245 62.9
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 5.6e-77 291.6 245 62.0
Peaxi162Scf00475g00124 Petunia axillaris HOM05D006716 ORTHO05D008396 4.6e-71 271.9 245 60.4
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 1.6e-63 246.9 224 58.0
Peaxi162Scf00475g00024 Petunia axillaris HOM05D006716 ORTHO05D008396 1.7e-60 236.9 217 60.4
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 3.8e-57 225.7 230 51.3
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 1.1e-53 214.2 248 50.0
CAN.G497.65 Capsicum annuum HOM05D006716 ORTHO05D008396 4.4e-53 212.2 221 53.8
CAN.G497.70 Capsicum annuum HOM05D006716 ORTHO05D008396 5.7e-53 211.8 219 53.9
Peaxi162Scf00663g00027 Petunia axillaris HOM05D006716 ORTHO05D008396 3.7e-52 209.1 236 50.0
Peaxi162Scf00663g00009 Petunia axillaris HOM05D006716 ORTHO05D008396 1.8e-51 206.8 231 48.9
Peaxi162Scf00168g01520 Petunia axillaris HOM05D006716 ORTHO05D008396 5.0e-49 198.7 203 55.2
CAN.G497.60 Capsicum annuum HOM05D006716 ORTHO05D008396 6.5e-49 198.4 219 52.1
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 6.1e-47 191.8 234 47.0
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 2.8e-44 183.0 249 41.4
SGA_v2.0_scaffold50G18515 Striga asiatica HOM05D006716 ORTHO05D008396 3.1e-43 179.5 217 46.1
Aqoxy4G01948 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 3.5e-42 176.0 244 41.0
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 6.5e-41 171.8 195 47.7
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 2.5e-40 169.9 210 46.2
Lj9A35T20 Lonicera japonica HOM05D006716 ORTHO05D008396 1.2e-39 167.5 200 48.0
Rhsim02G0098700 Rhododendron simsii HOM05D006716 ORTHO05D008396 4.7e-39 165.6 239 44.4
Aqoxy4G01949 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 6.1e-39 165.2 198 48.0
CSS0050127 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 3.0e-38 162.9 247 42.9
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 3.0e-38 162.9 194 46.4
DCAR_002644 Daucus carota HOM05D006716 ORTHO05D008396 6.8e-38 161.8 232 44.0
Hma1.2p1_0154F.1_g068000 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.2e-37 161.0 242 43.0
vmacro12389 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 5.7e-37 158.7 201 44.8
Hma1.2p1_0003F.1_g003620 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 4.8e-36 155.6 194 46.4
Medtr5g064160 Medicago truncatula HOM05D006716 ORTHO05D008396 4.8e-36 155.6 259 38.2
Rhsim02G0098800 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.4e-35 153.3 196 47.4
Peaxi162Scf00038g00840 Petunia axillaris HOM05D006716 ORTHO05D008396 3.1e-35 152.9 174 54.0
Manes.11G055432 Manihot esculenta HOM05D006716 ORTHO05D008396 5.3e-35 152.1 138 55.1
Peaxi162Scf00226g00716 Petunia axillaris HOM05D006716 ORTHO05D008396 2.0e-34 150.2 187 46.5
Hma1.2p1_0310F.1_g120920 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 4.5e-34 149.1 201 42.8
Manes.04G051500 Manihot esculenta HOM05D006716 ORTHO05D008396 4.5e-34 149.1 132 56.1
CSS0009954 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 5.9e-34 148.7 223 44.4
Ca_24998_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 5.0e-33 145.6 225 36.9
vmacro15746 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 5.0e-33 145.6 169 46.7
vmacro12393 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 6.5e-33 145.2 207 43.5
vmacro15749 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.5e-32 143.3 247 42.5
Ah.10g035270 Amaranthus hybridus HOM05D006716 ORTHO05D008396 4.2e-32 142.5 216 40.3
Ah.10g035350 Amaranthus hybridus HOM05D006716 ORTHO05D008396 4.2e-32 142.5 216 40.3
Hma1.2p1_0003F.1_g003570 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.2e-31 141.0 170 47.1
DCAR_001924 Daucus carota HOM05D006716 ORTHO05D008396 1.0e-30 137.9 198 38.4
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.4e-30 137.5 217 39.2
Ah.10g035360 Amaranthus hybridus HOM05D006716 ORTHO05D008396 8.8e-30 134.8 213 40.8
TPR.G29566 Trifolium pratense HOM05D006716 ORTHO05D008396 1.5e-29 134.0 211 37.9
Duzib114G0505 Durio zibethinus HOM05D006716 ORTHO05D008396 3.4e-29 132.9 193 41.5
vmacro12392 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 3.4e-29 132.9 168 42.9
Peaxi162Scf00226g00715 Petunia axillaris HOM05D006716 ORTHO05D008396 2.8e-28 129.8 192 40.6
Peaxi162Scf01072g00410 Petunia axillaris HOM05D006716 ORTHO05D008396 2.8e-28 129.8 154 48.7
SGA_v2.0_scaffold57G20303 Striga asiatica HOM05D006716 ORTHO05D008396 1.8e-27 127.1 196 41.3
Duzib114G0950 Durio zibethinus HOM05D006716 ORTHO05D008396 2.4e-27 126.7 195 41.0
Rhsim09G0048400 Rhododendron simsii HOM05D006716 ORTHO05D008396 4.1e-27 125.9 196 39.8
SGA_v2.0_scaffold57G20300 Striga asiatica HOM05D006716 ORTHO05D008396 4.1e-27 125.9 205 40.5
vmacro15747 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 9.1e-27 124.8 186 40.9
Duzib114G0774 Durio zibethinus HOM05D006716 ORTHO05D008396 1.6e-26 124.0 189 42.3
DCAR_001902 Daucus carota HOM05D006716 ORTHO05D008396 2.7e-26 123.2 202 41.6
Rhsim01G0093600 Rhododendron simsii HOM05D006716 ORTHO05D008396 5.9e-26 122.1 187 43.3
Rhsim01G0092700 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.3e-25 120.9 198 39.4
Rhsim01G0093800 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.3e-25 120.9 198 39.4
Rhsim07G0026700 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.3e-25 120.2 231 36.8
Rhsim01G0092600 Rhododendron simsii HOM05D006716 ORTHO05D008396 6.6e-25 118.6 196 38.8
CAN.G497.57 Capsicum annuum HOM05D006716 ORTHO05D008396 5.5e-24 115.5 93 62.4
EL10Ac9g20945 Beta vulgaris HOM05D006716 ORTHO05D008396 9.5e-24 114.8 175 43.4
Duzib114G0358 Durio zibethinus HOM05D006716 ORTHO05D008396 2.8e-23 113.2 253 33.6
SGA_v2.0_scaffold237G43860 Striga asiatica HOM05D006716 ORTHO05D008396 4.7e-23 112.5 208 34.6
Rhsim01G0093700 Rhododendron simsii HOM05D000991 ORTHO05D008396 1.0e-22 111.3 176 38.6
Ah.10g035290 Amaranthus hybridus HOM05D006716 ORTHO05D008396 5.2e-22 109.0 121 47.1
CAN.G679.10 Capsicum annuum HOM05D001437 ORTHO05D001297 8.9e-22 108.2 215 39.5
Lj9A35T22 Lonicera japonica HOM05D006716 ORTHO05D008396 5.7e-21 105.5 252 34.9
DCAR_024034 Daucus carota HOM05D006716 ORTHO05D008396 7.5e-21 105.1 177 40.7
Potri.018G001301 Populus trichocarpa HOM05D006716 ORTHO05D008396 6.3e-20 102.1 211 35.1
Potri.018G001500 Populus trichocarpa HOM05D006716 ORTHO05D008396 5.4e-19 99.0 263 32.3
Peaxi162Scf00226g00717 Petunia axillaris HOM05D006716 ORTHO05D008396 5.9e-18 95.5 136 43.4
DCAR_001904 Daucus carota HOM05D006716 ORTHO05D008396 1.0e-17 94.7 133 39.8
Ca_25012_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 8.6e-17 91.7 122 40.2
PSO478G4756 Papaver somniferum HOM05D006716 ORTHO05D008396 1.6e-15 87.4 199 33.2
Os09g0436700 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 6.1e-15 85.5 184 32.1
Os03g0608800 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 1.8e-14 84.0 232 25.9
Os07g0665300 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 3.1e-14 83.2 183 30.6
Os09g0436400 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 6.8e-14 82.0 185 31.4
Os07g0665700 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 7.5e-13 78.6 92 42.4
PSO478G1238 Papaver somniferum HOM05D006716 ORTHO05D008396 1.3e-12 77.8 198 33.8
TPR.G12759 Trifolium pratense HOM05D006716 ORTHO05D008396 3.7e-12 76.3 196 28.6
Ah.08g210040 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.4e-11 74.3 188 29.3
Lj6A58T50 Lonicera japonica HOM05D006716 ORTHO05D008396 3.2e-11 73.2 173 33.5
DCAR_010103 Daucus carota HOM05D006716 ORTHO05D008396 5.4e-11 72.4 143 39.2
Ca_25001_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 7.8e-10 68.6 79 39.2
Os01g0776500 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 1.7e-09 67.4 112 33.9
Os03g0109900 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D030339 1.7e-09 67.4 98 35.7
PSO017G6103 Papaver somniferum HOM05D006716 ORTHO05D008396 6.6e-09 65.5 114 32.5
Ah.10g035280 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.9e-08 63.9 112 39.3
Ah.10g035200 Amaranthus hybridus HOM05D006716 ORTHO05D008396 2.5e-08 63.5 112 39.3
Psat1g146440 Pisum sativum HOM05D006716 ORTHO05D008396 3.6e-07 59.7 79 43.0
Os03g0846400 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 4.7e-07 59.3 90 34.4
DCAR_001166 Daucus carota HOM05D006716 ORTHO05D008396 1.4e-06 57.8 104 38.5
Os12g0141600 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 1.8e-06 57.4 88 30.7
DCAR_026566 Daucus carota HOM05D012205 ORTHO05D014781 3.1e-06 56.6 179 30.2
Os09g0436300 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 4.0e-06 56.2 103 35.0


User provided reference genes

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