Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g081780.3 Solanum lycopersicum HOM05D009106 ORTHO05D010235 1.5e-153 546.2 294 100.0
Sopen02g026380 Solanum pennellii HOM05D009106 ORTHO05D010235 1.5e-111 406.8 272 86.4
Solyc02g065340.3 Solanum lycopersicum HOM05D009106 ORTHO05D010235 7.9e-57 224.9 295 44.7
Peaxi162Scf00234g00222 Petunia axillaris HOM05D009106 ORTHO05D010235 8.1e-54 214.9 301 43.2
Nitab4.5_0000806g0040 Nicotiana tabacum HOM05D009106 ORTHO05D010235 1.2e-52 211.1 297 44.1
Nitab4.5_0005238g0010 Nicotiana tabacum HOM05D009106 ORTHO05D010235 2.6e-52 209.9 309 43.4
Peaxi162Scf01198g00214 Petunia axillaris HOM05D009106 ORTHO05D010235 2.9e-51 206.5 294 44.2
Peaxi162Scf00234g00218 Petunia axillaris HOM05D009106 ORTHO05D010235 4.2e-50 202.6 296 43.9
PGSC0003DMG400043353 Solanum tuberosum HOM05D009106 ORTHO05D010235 3.5e-49 199.5 270 44.1
PGSC0003DMG400045041 Solanum tuberosum HOM05D009106 ORTHO05D010235 3.1e-45 186.4 281 44.5
Sopen02g015520 Solanum pennellii HOM05D009106 ORTHO05D010235 1.3e-35 154.5 208 42.3
Solyc05g017740.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 2.7e-33 146.7 111 61.3
Peaxi162Scf00234g00219 Petunia axillaris HOM05D009106 ORTHO05D010235 7.9e-33 145.2 253 41.9
Peaxi162Scf01198g00315 Petunia axillaris HOM05D009106 ORTHO05D010235 3.4e-28 129.8 88 71.6
CAN.G1630.1 Capsicum annuum HOM05D009106 ORTHO05D010235 1.9e-26 124.0 113 56.6
CAN.G1308.2 Capsicum annuum HOM05D009106 ORTHO05D010235 1.4e-24 117.9 171 39.2
CAN.G11.29 Capsicum annuum HOM05D009106 ORTHO05D010235 4.4e-23 112.8 77 70.1
Solyc00g500092.1 Solanum lycopersicum HOM05D000395 ORTHO05D010235 1.7e-22 110.9 286 28.0
Solyc00g500219.1 Solanum lycopersicum HOM05D000395 ORTHO05D010235 1.7e-22 110.9 286 28.0
Solyc03g036477.2 Solanum lycopersicum HOM05D000395 ORTHO05D010235 1.7e-22 110.9 286 28.0
Peaxi162Scf01198g00310 Petunia axillaris HOM05D009106 ORTHO05D010235 3.7e-22 109.8 106 51.9
CAN.G533.1 Capsicum annuum HOM05D009106 ORTHO05D010235 4.8e-22 109.4 126 45.2
CAN.G1308.1 Capsicum annuum HOM05D005506 ORTHO05D004172 1.8e-21 107.5 98 55.1
PGSC0003DMG400002785 Solanum tuberosum HOM05D000395 ORTHO05D010235 1.8e-21 107.5 146 43.2
Nitab4.5_0005238g0020 Nicotiana tabacum HOM05D009106 ORTHO05D010235 4.1e-21 106.3 115 48.7
Solyc00g011660.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 9.1e-21 105.1 104 51.0
Solyc00g500222.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 1.2e-20 104.8 104 51.0
PGSC0003DMG400040663 Solanum tuberosum HOM05D000395 ORTHO05D010235 1.2e-20 104.8 112 50.0
Sopen11g021070 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-20 104.4 109 50.5
Solyc03g043580.3 Solanum lycopersicum HOM05D000395 ORTHO05D010235 4.5e-20 102.8 103 50.5
PGSC0003DMG400013104 Solanum tuberosum HOM05D009106 ORTHO05D010235 1.7e-19 100.9 86 57.0
Sopen00g003940 Solanum pennellii HOM05D000047 ORTHO05D000044 8.5e-19 98.6 101 47.5
Solyc01g015210.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 2.1e-17 94.0 294 27.2
Sopen02g015460 Solanum pennellii HOM05D009106 ORTHO05D010235 3.6e-17 93.2 75 62.7
Cc00_g11360 Coffea canephora HOM05D037937 ORTHO05D010235 7.9e-17 92.0 290 31.7
PGSC0003DMG400013106 Solanum tuberosum HOM05D009106 ORTHO05D010235 1.8e-16 90.9 75 62.7
Sopen02g015510 Solanum pennellii HOM05D009106 ORTHO05D010235 2.3e-16 90.5 152 35.5
Manes.13G130800 Manihot esculenta HOM05D000823 ORTHO05D000088 2.6e-15 87.0 278 25.9
Sopen05g014190 Solanum pennellii HOM05D009106 ORTHO05D010235 2.6e-15 87.0 60 65.0
Gohir.D03G019700 Gossypium hirsutum HOM05D000823 ORTHO05D010235 4.4e-15 86.3 281 26.3
Gorai.003G020400 Gossypium raimondii HOM05D000823 ORTHO05D010235 4.4e-15 86.3 281 26.3
Nitab4.5_0000806g0020 Nicotiana tabacum HOM05D009106 ORTHO05D010235 4.4e-15 86.3 105 48.6
Dinv26758 Davidia involucrata HOM05D000823 ORTHO05D000088 9.7e-15 85.1 299 25.1
Gohir.A02G160800 Gossypium hirsutum HOM05D000823 ORTHO05D010235 1.3e-14 84.7 281 26.0
Peaxi162Scf01198g00213 Petunia axillaris HOM05D000727 ORTHO05D000541 1.1e-13 81.6 76 55.3
Gohir.D03G019725 Gossypium hirsutum HOM05D000823 ORTHO05D010235 1.8e-13 80.9 281 25.6
Medtr7g050580 Medicago truncatula HOM05D000395 ORTHO05D000088 2.4e-13 80.5 261 28.4
Gorai.003G020600 Gossypium raimondii HOM05D000823 ORTHO05D010235 7.0e-13 79.0 274 25.9
Gohir.A02G160700 Gossypium hirsutum HOM05D000823 ORTHO05D000088 7.7e-12 75.5 281 27.4
CSS0024635 Camellia sinensis var. sinensis HOM05D009784 ORTHO05D010235 4.2e-10 69.7 251 25.9
Nn6g32142 Nelumbo nucifera HOM05D000823 ORTHO05D000088 4.2e-10 69.7 275 25.1
Thecc.01G047300 Theobroma cacao HOM05D000823 ORTHO05D000088 9.4e-10 68.6 284 25.0
Sopen02g015470 Solanum pennellii HOM05D023357 ORTHO05D022985 1.2e-09 68.2 49 67.3
Gorai.003G020700 Gossypium raimondii HOM05D000823 ORTHO05D000088 2.7e-09 67.0 280 25.7
PSO541G5436 Papaver somniferum HOM05D000823 ORTHO05D000088 8.0e-09 65.5 284 30.3
TAR376G0714 Trochodendron aralioides HOM05D000823 ORTHO05D000088 8.0e-09 65.5 289 23.5
Cc00_g18110 Coffea canephora HOM05D037937 ORTHO05D010235 1.0e-08 65.1 92 34.8
FAN20G0318 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.0e-08 65.1 258 22.5
SGA_v2.0_scaffold15G07222 Striga asiatica HOM05D010976 ORTHO05D000088 1.0e-08 65.1 289 26.3
Nitab4.5_0000806g0060 Nicotiana tabacum HOM05D000727 ORTHO05D010235 1.4e-08 64.7 60 56.7
Solyc11g045450.3 Solanum lycopersicum HOM05D000395 ORTHO05D010235 1.8e-08 64.3 91 40.7
DCAR_010940 Daucus carota HOM05D000395 ORTHO05D000088 5.2e-08 62.8 254 22.8
Aa31LG11G11510 Aethionema arabicum HOM05D007600 ORTHO05D009132 6.7e-08 62.4 264 30.7
Cc07_g05480 Coffea canephora HOM05D000823 ORTHO05D000088 6.7e-08 62.4 289 25.3
Nn5g28071 Nelumbo nucifera HOM05D000823 ORTHO05D000088 6.7e-08 62.4 277 21.3
AT5G18000 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 8.8e-08 62.0 301 23.3
ECA246G4930 Erigeron canadensis HOM05D009106 ORTHO05D010235 8.8e-08 62.0 262 25.6
Thhalv10015705m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 8.8e-08 62.0 284 22.5
BraA02t05424Z Brassica rapa HOM05D007600 ORTHO05D009132 1.2e-07 61.6 316 22.2
Duzib248G0282 Durio zibethinus HOM05D000823 ORTHO05D009132 1.5e-07 61.2 297 23.6
FvH4_2g06970 Fragaria vesca HOM05D000823 ORTHO05D000088 1.5e-07 61.2 87 36.8
BcaC03g13563 Brassica carinata HOM05D007600 ORTHO05D009132 4.4e-07 59.7 316 21.8
CARHR195070 Cardamine hirsuta HOM05D007600 ORTHO05D009132 4.4e-07 59.7 291 21.0
ECA234G4443 Erigeron canadensis HOM05D009784 ORTHO05D010235 4.4e-07 59.7 262 25.2
FvH4_2g06960 Fragaria vesca HOM05D000823 ORTHO05D000088 4.4e-07 59.7 71 38.0
Sp6g26290 Schrenkiella parvula HOM05D007600 ORTHO05D009132 4.4e-07 59.7 298 22.5
AT4G31690 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 5.7e-07 59.3 236 23.7
SalBow1G4579 Salvia bowleyana HOM05D005797 ORTHO05D000088 9.7e-07 58.5 276 25.0
Solyc00g500097.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 1.3e-06 58.2 48 52.1
Solyc00g500220.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 1.3e-06 58.2 48 52.1
C02p09570 Brassica napus HOM05D007600 ORTHO05D009132 1.7e-06 57.8 316 21.5
Medtr7g050710 Medicago truncatula HOM05D000395 ORTHO05D000088 1.7e-06 57.8 294 23.5
Cc05_g09350 Coffea canephora HOM05D000888 ORTHO05D000740 2.2e-06 57.4 86 29.1
BcaB05g23317 Brassica carinata HOM05D007600 ORTHO05D009132 2.8e-06 57.0 326 21.2
CAN.G137.56 Capsicum annuum HOM05D000888 ORTHO05D000740 2.8e-06 57.0 100 32.0
HanXRQChr12g0380731 Helianthus annuus HOM05D009784 ORTHO05D010235 2.8e-06 57.0 97 35.1
Manes.07G112905 Manihot esculenta HOM05D000395 ORTHO05D000088 2.8e-06 57.0 295 20.7
AL6G29100 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 3.7e-06 56.6 297 22.9
A02p04630 Brassica napus HOM05D007600 ORTHO05D009132 3.7e-06 56.6 306 25.5
vmacro17887 Vaccinium macrocarpon HOM05D000395 ORTHO05D000088 3.7e-06 56.6 92 35.9
BcaC04g18726 Brassica carinata HOM05D007600 ORTHO05D009132 6.3e-06 55.8 293 21.2
BcaNung05177 Brassica carinata HOM05D000888 ORTHO05D000740 6.3e-06 55.8 234 23.9
BolC2t06864H Brassica oleracea HOM05D007600 ORTHO05D009132 6.3e-06 55.8 316 20.9
BolC9t58734H Brassica oleracea HOM05D007600 ORTHO05D009132 6.3e-06 55.8 293 21.2
FAN27G2261 Fragaria x ananassa HOM05D000823 ORTHO05D000088 6.3e-06 55.8 87 34.5


User provided reference genes

Program Settings