Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g081590.3 Solanum lycopersicum HOM05D014199 ORTHO05D014309 0.0e+00 1557.3 799 100.0
Sopen02g026210 Solanum pennellii HOM05D014199 ORTHO05D014309 0.0e+00 1489.6 799 95.1
PGSC0003DMG400017731 Solanum tuberosum HOM05D014199 ORTHO05D014309 0.0e+00 1302.7 825 81.8
CAN.G809.74 Capsicum annuum HOM05D014199 ORTHO05D014309 2.4e-201 706.4 896 51.3
Peaxi162Scf00344g00159 Petunia axillaris HOM05D014199 ORTHO05D014309 1.1e-134 485.0 1049 37.0
Nitab4.5_0006392g0080 Nicotiana tabacum HOM05D014199 ORTHO05D014309 4.2e-129 466.5 861 43.6
Nitab4.5_0006976g0020 Nicotiana tabacum HOM05D014199 ORTHO05D014309 1.2e-120 438.3 925 40.6
Nitab4.5_0000817g0030 Nicotiana tabacum HOM05D014199 ORTHO05D014309 4.3e-49 200.7 190 54.7
Nitab4.5_0004024g0020 Nicotiana tabacum HOM05D014199 ORTHO05D014309 4.0e-47 194.1 186 54.3
Peaxi162Scf00784g00410 Petunia axillaris HOM05D014199 ORTHO05D014309 3.5e-43 181.0 184 48.9
Nn3g18650 Nelumbo nucifera HOM05D001642 ORTHO05D014309 1.7e-16 92.4 200 28.5
Aqoxy2G01354 Aquilegia oxysepala HOM05D001642 ORTHO05D002129 9.1e-15 86.7 182 29.1
Solyc10g006770.4 Solanum lycopersicum HOM05D001642 ORTHO05D002129 5.0e-13 80.9 204 27.5
TAR365G0482 Trochodendron aralioides HOM05D001642 ORTHO05D002129 6.5e-13 80.5 180 28.3
TAR365G0965 Trochodendron aralioides HOM05D001642 ORTHO05D002129 6.5e-13 80.5 180 28.3
TAR365G0980 Trochodendron aralioides HOM05D001642 ORTHO05D002129 6.5e-13 80.5 180 28.3
Nn3g18368 Nelumbo nucifera HOM05D001642 ORTHO05D002129 1.9e-12 79.0 182 28.6
SGA_v2.0_scaffold104G30153 Striga asiatica HOM05D001642 ORTHO05D002129 2.5e-12 78.6 181 28.2
Thecc.05G327700 Theobroma cacao HOM05D001642 ORTHO05D002129 2.5e-12 78.6 183 28.4
Gohir.A11G275000 Gossypium hirsutum HOM05D001642 ORTHO05D002129 3.2e-12 78.2 181 29.8
MELO3C007085.2 Cucumis melo HOM05D001642 ORTHO05D002129 7.2e-12 77.0 180 26.7
CsaV3_6G052250 Cucumis sativus L. HOM05D001642 ORTHO05D002129 7.2e-12 77.0 180 26.7
TPR.G26670 Trifolium pratense HOM05D001642 ORTHO05D002129 9.4e-12 76.6 178 28.1
CAN.G1110.39 Capsicum annuum HOM05D001642 ORTHO05D002129 1.6e-11 75.9 204 26.5
Gohir.D11G285400 Gossypium hirsutum HOM05D001642 ORTHO05D002129 1.6e-11 75.9 181 29.3
ATR0982G001 Amborella trichopoda HOM05D001642 ORTHO05D002129 2.7e-11 75.1 172 27.9
Gorai.007G308600 Gossypium raimondii HOM05D001642 ORTHO05D002129 2.7e-11 75.1 181 29.3
Gohir.A13G177400 Gossypium hirsutum HOM05D001642 ORTHO05D002129 1.0e-10 73.2 183 29.5
Oeu061926.1 Olea europaea HOM05D001642 ORTHO05D002129 1.4e-10 72.8 197 26.9
TWI34G1342 Tripterygium wilfordii HOM05D001642 ORTHO05D002129 1.4e-10 72.8 182 28.0
Sed0012617 Sechium edule HOM05D001642 ORTHO05D002129 1.8e-10 72.4 180 26.1
Sed0013603 Sechium edule HOM05D001642 ORTHO05D002129 1.8e-10 72.4 181 26.5
CSS0028187 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 2.3e-10 72.0 182 29.7
Psat3g019760 Pisum sativum HOM05D001642 ORTHO05D002129 2.3e-10 72.0 192 28.6
ClCG01G025060 Citrullus lanatus HOM05D001642 ORTHO05D002129 3.0e-10 71.6 180 26.7
CSS0002490 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 3.9e-10 71.2 182 29.7
Dinv24498 Davidia involucrata HOM05D001642 ORTHO05D002129 3.9e-10 71.2 180 28.9
Gohir.D13G184000 Gossypium hirsutum HOM05D001642 ORTHO05D002129 3.9e-10 71.2 183 26.8
Gorai.013G209300 Gossypium raimondii HOM05D001642 ORTHO05D002129 3.9e-10 71.2 183 26.8
Carub.0006s2948 Capsella rubella HOM05D001642 ORTHO05D002129 5.2e-10 70.9 180 27.2
SalBow7G1041 Salvia bowleyana HOM05D001642 ORTHO05D002129 5.2e-10 70.9 181 28.2
QL03p009293 Quercus lobata HOM05D001642 ORTHO05D002129 6.7e-10 70.5 181 28.2
Actinidia35499 Actinidia chinensis HOM05D001642 ORTHO05D002129 8.8e-10 70.1 182 26.4
CDE12G0244 Ceratophyllum demersum HOM05D001642 ORTHO05D002129 1.1e-09 69.7 182 27.5
Actinidia16891 Actinidia chinensis HOM05D001642 ORTHO05D002129 2.6e-09 68.6 180 27.2
Thecc.05G327600 Theobroma cacao HOM05D001642 ORTHO05D002129 2.6e-09 68.6 181 28.7
Manes.04G151800 Manihot esculenta HOM05D001642 ORTHO05D002129 4.4e-09 67.8 169 31.4
TWI32G0544 Tripterygium wilfordii HOM05D001642 ORTHO05D002129 4.4e-09 67.8 182 28.0
Dinv30930 Davidia involucrata HOM05D001642 ORTHO05D002129 5.7e-09 67.4 180 28.3
Duzib177G0327 Durio zibethinus HOM05D001642 ORTHO05D002129 5.7e-09 67.4 181 28.2
Atru.chr2.1956 Acer truncatum HOM05D001642 ORTHO05D002129 7.4e-09 67.0 182 26.9
Migut.B00861 Erythranthe guttata HOM05D001642 ORTHO05D002129 7.4e-09 67.0 277 24.2
Actinidia16892 Actinidia chinensis HOM05D001642 ORTHO05D002129 9.7e-09 66.6 178 27.0
Lj5C321T11 Lonicera japonica HOM05D001642 ORTHO05D002129 9.7e-09 66.6 182 25.8
Ciclev10010953m.g Citrus clementina HOM05D001642 ORTHO05D002129 1.7e-08 65.9 173 26.6
Lj5C321T4 Lonicera japonica HOM05D001642 ORTHO05D002129 1.7e-08 65.9 180 27.2
unitig_62.g23641 Utricularia gibba HOM05D001642 ORTHO05D002129 1.7e-08 65.9 181 26.0
BraA03t12104Z Brassica rapa HOM05D001642 ORTHO05D002129 2.8e-08 65.1 180 24.4
BcaC01g04665 Brassica carinata HOM05D001642 ORTHO05D002129 3.7e-08 64.7 180 24.4
A03p29090 Brassica napus HOM05D001642 ORTHO05D002129 3.7e-08 64.7 180 24.4
BolC3t15827H Brassica oleracea HOM05D001642 ORTHO05D002129 3.7e-08 64.7 180 24.4
SEGI_07934 Sequoiadendron giganteum HOM05D001642 ORTHO05D002129 3.7e-08 64.7 151 27.2
CAN.G1374.12 Capsicum annuum HOM05D001642 ORTHO05D002129 4.8e-08 64.3 181 24.3
COL.COLO4_15580 Corchorus olitorius HOM05D001642 ORTHO05D002129 4.8e-08 64.3 140 29.3
PGSC0003DMG400025001 Solanum tuberosum HOM05D001642 ORTHO05D002129 4.8e-08 64.3 149 28.9
C03p35150 Brassica napus HOM05D001642 ORTHO05D002129 6.3e-08 63.9 180 24.4
Sopen10g002690 Solanum pennellii HOM05D001642 ORTHO05D002129 6.3e-08 63.9 149 28.9
EL10Ac4g09533 Beta vulgaris HOM05D001642 ORTHO05D002129 8.2e-08 63.5 174 26.4
Cc02_g35560 Coffea canephora HOM05D001642 ORTHO05D002129 1.8e-07 62.4 183 25.1
Rhsim11G0099900 Rhododendron simsii HOM05D001642 ORTHO05D002129 1.8e-07 62.4 180 25.0
Migut.N00964 Erythranthe guttata HOM05D001642 ORTHO05D002129 2.4e-07 62.0 158 30.4
Oeu060659.1 Olea europaea HOM05D001642 ORTHO05D002129 2.4e-07 62.0 111 34.2
CARHR255890 Cardamine hirsuta HOM05D001642 ORTHO05D002129 4.1e-07 61.2 199 26.1
Manes.08G108300 Manihot esculenta HOM05D001642 ORTHO05D002129 5.3e-07 60.8 151 28.5
DCAR_005264 Daucus carota HOM05D001642 ORTHO05D002129 7.0e-07 60.5 166 24.7
PSO017G1336 Papaver somniferum HOM05D001642 ORTHO05D002129 7.0e-07 60.5 201 24.9
Aqoxy7G02712 Aquilegia oxysepala HOM05D001642 ORTHO05D014309 2.0e-06 58.9 107 35.5
Aqoxy3G04263 Aquilegia oxysepala HOM05D001642 ORTHO05D014309 2.6e-06 58.5 98 29.6
PSO170G0832 Papaver somniferum HOM05D001642 ORTHO05D002129 3.5e-06 58.2 81 38.3
RcHm_v2.0_Chr3g0460191 Rosa chinensis HOM05D001642 ORTHO05D002129 5.9e-06 57.4 190 23.7
Actinidia17130 Actinidia chinensis HOM05D014199 ORTHO05D014309 7.7e-06 57.0 89 36.0


User provided reference genes

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