Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 1.0e-154 550.1 277 100.0
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 9.4e-153 543.5 277 98.6
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 4.2e-145 518.1 277 93.9
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 1.6e-144 516.2 270 96.7
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.4e-132 476.5 277 88.4
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.9e-129 466.1 270 88.1
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.2e-128 463.4 277 85.2
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 4.9e-109 398.3 276 72.8
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 4.3e-105 385.2 277 70.0
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 5.6e-105 384.8 278 70.1
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 6.2e-104 381.3 276 71.4
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 1.3e-101 373.6 276 69.6
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 4.9e-101 371.7 278 68.7
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 8.4e-101 370.9 275 69.1
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 2.4e-100 369.4 282 68.1
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 4.1e-100 368.6 264 72.7
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 7.8e-99 364.4 267 68.5
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 3.0e-98 362.5 267 68.5
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 3.9e-98 362.1 268 70.5
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 6.6e-98 361.3 276 66.7
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 2.5e-97 359.4 277 68.2
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 7.3e-97 357.8 270 67.0
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 9.6e-97 357.5 276 67.8
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.6e-96 356.7 278 66.5
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 1.6e-96 356.7 278 68.0
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.8e-95 353.2 278 66.5
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.4e-95 352.8 285 66.7
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.4e-95 352.8 292 65.8
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 6.8e-95 351.3 268 66.8
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 6.8e-95 351.3 228 76.8
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 8.9e-95 350.9 259 71.4
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 8.9e-95 350.9 282 66.3
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 1.2e-94 350.5 269 67.7
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.0e-94 349.7 292 65.1
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 3.4e-94 349.0 279 64.5
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 5.8e-94 348.2 292 65.8
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 7.6e-94 347.8 269 68.4
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 1.7e-93 346.7 281 64.8
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 2.2e-93 346.3 277 63.9
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 2.2e-93 346.3 264 70.5
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 4.9e-93 345.1 275 66.5
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 1.1e-92 344.0 276 64.5
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 3.2e-92 342.4 281 64.1
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 4.2e-92 342.0 282 64.5
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 4.2e-92 342.0 279 63.8
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 4.2e-92 342.0 237 73.0
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 5.4e-92 341.7 280 65.4
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 9.3e-92 340.9 280 63.9
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 9.3e-92 340.9 274 66.4
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 1.6e-91 340.1 268 65.7
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 2.1e-91 339.7 247 68.8
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 2.7e-91 339.3 268 66.8
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 4.6e-91 338.6 263 65.8
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.3e-90 337.0 271 66.4
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 1.7e-90 336.7 198 81.3
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 2.3e-90 336.3 281 63.0
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 3.9e-90 335.5 281 66.2
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 8.7e-90 334.3 281 65.8
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 8.7e-90 334.3 282 63.8
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.5e-89 333.6 272 64.7
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 4.3e-89 332.0 269 66.2
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 4.3e-89 332.0 277 63.5
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 3.6e-88 328.9 290 62.8
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 3.6e-88 328.9 222 74.8
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 4.8e-88 328.6 274 65.3
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 6.2e-88 328.2 283 61.8
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.1e-87 327.4 197 79.2
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 1.4e-87 327.0 285 62.8
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 2.4e-87 326.2 276 64.5
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 4.0e-87 325.5 256 66.8
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 1.5e-86 323.6 277 62.1
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 3.4e-86 322.4 275 62.2
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 1.3e-85 320.5 297 57.6
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 4.9e-85 318.5 183 84.2
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 4.2e-84 315.5 222 71.2
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 2.1e-83 313.2 206 72.8
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 7.9e-83 311.2 197 76.1
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 3.0e-82 309.3 272 58.8
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 3.9e-82 308.9 196 76.0
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.1e-81 307.4 196 76.5
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.9e-81 306.6 197 75.1
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 4.3e-81 305.4 196 75.5
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 4.3e-81 305.4 196 75.5
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 4.3e-81 305.4 196 75.5
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 7.4e-81 304.7 239 66.1
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 1.3e-80 303.9 232 67.7
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 2.8e-80 302.8 207 71.0
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 6.2e-80 301.6 190 76.3
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 1.8e-79 300.1 197 73.1
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 3.1e-79 299.3 246 61.8
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 2.2e-77 293.1 182 76.4
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 7.1e-76 288.1 213 70.0
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 3.9e-74 282.3 276 57.2
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 3.9e-74 282.3 275 54.9
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 6.7e-74 281.6 195 68.7
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 3.1e-71 272.7 240 59.6
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 4.0e-71 272.3 164 78.7
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 9.0e-71 271.2 180 74.4
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 9.0e-71 271.2 180 74.4
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 2.4e-63 246.5 188 62.8
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 6.5e-61 238.4 212 55.2
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 6.7e-50 201.8 119 83.2
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 3.3e-49 199.5 182 58.2
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.7e-48 197.2 190 53.2
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 5.9e-46 188.7 103 84.5
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 7.5e-33 145.2 93 74.2
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.9e-28 130.6 81 79.0
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 2.3e-26 123.6 159 47.8
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 4.5e-22 109.4 86 61.6
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 9.5e-20 101.7 122 48.4
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 1.7e-16 90.9 192 30.7
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 3.5e-14 83.2 116 42.2
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 2.3e-10 70.5 176 30.7
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 1.1e-07 61.6 33 90.9


User provided reference genes

Program Settings