Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g080680.3 Solanum lycopersicum HOM05D000317 ORTHO05D017122 2.0e-52 209.9 230 100.0
Solyc02g080730.2 Solanum lycopersicum HOM05D000317 ORTHO05D000032 4.3e-34 149.1 213 93.9
Solyc02g080710.2 Solanum lycopersicum HOM05D000317 ORTHO05D017122 2.6e-31 139.8 208 67.8
Sopen02g025410 Solanum pennellii HOM05D000317 ORTHO05D017122 5.4e-29 132.1 208 80.3
Sopen02g025420 Solanum pennellii HOM05D000317 ORTHO05D017122 8.7e-27 124.8 208 76.4
Solyc02g150131.1 Solanum lycopersicum HOM05D000317 ORTHO05D017122 1.9e-26 123.6 208 77.9
Solyc02g080740.3 Solanum lycopersicum HOM05D000317 ORTHO05D000032 9.6e-26 121.3 204 77.0
Nitab4.5_0001409g0040 Nicotiana tabacum HOM05D000317 ORTHO05D000032 6.4e-14 82.0 70 62.9
Sopen02g025440 Solanum pennellii HOM05D000006 ORTHO05D000001 5.4e-13 79.0 174 46.0
Sopen02g025550 Solanum pennellii HOM05D000317 ORTHO05D000032 5.4e-13 79.0 63 60.3
Solyc02g080860.3 Solanum lycopersicum HOM05D000317 ORTHO05D000032 7.1e-13 78.6 64 59.4
CAN.G1014.18 Capsicum annuum HOM05D000317 ORTHO05D000032 2.7e-12 76.6 71 59.2
Nitab4.5_0006031g0030 Nicotiana tabacum HOM05D000317 ORTHO05D000032 2.7e-12 76.6 54 70.4
Sopen02g025400 Solanum pennellii HOM05D000317 ORTHO05D017122 1.3e-11 74.3 175 61.1
Sabra04G0005200 Salix brachista HOM05D000317 ORTHO05D000032 6.2e-09 65.5 75 53.3
Cfa000206 Carpinus fangiana HOM05D000317 ORTHO05D000032 1.4e-08 64.3 42 76.2
Manes.17G026000 Manihot esculenta HOM05D000317 ORTHO05D000032 4.0e-08 62.8 42 73.8
Potri.004G010000 Populus trichocarpa HOM05D000317 ORTHO05D000032 4.0e-08 62.8 72 50.0
Haze_06816 Corylus avellana HOM05D000317 ORTHO05D000032 5.3e-08 62.4 41 75.6
Duzib160G0938 Durio zibethinus HOM05D000317 ORTHO05D000032 9.0e-08 61.6 51 64.7
Thecc.06G222900 Theobroma cacao HOM05D000317 ORTHO05D000032 1.2e-07 61.2 42 71.4
Gohir.A06G148900 Gossypium hirsutum HOM05D000317 ORTHO05D000032 1.5e-07 60.8 42 71.4
PGSC0003DMG400016474 Solanum tuberosum HOM05D000317 ORTHO05D017122 1.5e-07 60.8 175 28.0
Gohir.D06G155000 Gossypium hirsutum HOM05D000317 ORTHO05D000032 2.0e-07 60.5 54 61.1
CiPaw.10G072500 Carya illinoinensis HOM05D000317 ORTHO05D000032 2.6e-07 60.1 36 77.8
Duzib192G0145 Durio zibethinus HOM05D000317 ORTHO05D000032 2.6e-07 60.1 51 62.7
TWI38G0842 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 2.6e-07 60.1 42 71.4
Prupe.4G018700 Prunus persica HOM05D000317 ORTHO05D000032 5.8e-07 58.9 53 58.5
RcHm_v2.0_Chr5g0002671 Rosa chinensis HOM05D000317 ORTHO05D000032 7.6e-07 58.5 53 54.7
Psat1g179600 Pisum sativum HOM05D000317 ORTHO05D000032 1.0e-06 58.2 35 71.4
TAR627G0685 Trochodendron aralioides HOM05D000317 ORTHO05D000032 1.0e-06 58.2 42 66.7
Actinidia26903 Actinidia chinensis HOM05D000317 ORTHO05D000032 1.3e-06 57.8 42 64.3
Dinv13909 Davidia involucrata HOM05D000317 ORTHO05D000032 1.7e-06 57.4 62 51.6
Duzib235G1148 Durio zibethinus HOM05D000317 ORTHO05D000032 1.7e-06 57.4 41 70.7
MD10G1323600 Malus domestica HOM05D000317 ORTHO05D000032 1.7e-06 57.4 53 56.6
Sabra11G0005800 Salix brachista HOM05D000317 ORTHO05D000032 1.7e-06 57.4 71 45.1
Psat1g179560 Pisum sativum HOM05D000317 ORTHO05D000032 2.2e-06 57.0 35 71.4
Ciclev10018145m.g Citrus clementina HOM05D000317 ORTHO05D000032 2.9e-06 56.6 42 66.7
FvH4_3g01830 Fragaria vesca HOM05D000317 ORTHO05D000032 3.8e-06 56.2 59 54.2
Gorai.010G181100 Gossypium raimondii HOM05D000317 ORTHO05D000032 3.8e-06 56.2 56 58.9
Ca_00670_v3 Cicer arietinum L. HOM05D000317 ORTHO05D000032 4.9e-06 55.8 42 71.4
DCAR_004231 Daucus carota HOM05D000317 ORTHO05D000032 4.9e-06 55.8 51 54.9
Phvul.006G149000 Phaseolus vulgaris HOM05D000317 ORTHO05D000032 4.9e-06 55.8 35 71.4
Potri.011G006350 Populus trichocarpa HOM05D000317 ORTHO05D000032 4.9e-06 55.8 71 46.5
arahy.Tifrunner.gnm1.ann1.QY4I34 Arachis hypogaea HOM05D000317 ORTHO05D000032 6.4e-06 55.5 35 80.0
COL.COLO4_31794 Corchorus olitorius HOM05D000317 ORTHO05D000032 6.4e-06 55.5 31 80.6
Glyma.09G004500 Glycine max HOM05D000317 ORTHO05D000032 8.4e-06 55.1 44 59.1
QL05p072766 Quercus lobata HOM05D000317 ORTHO05D000032 8.4e-06 55.1 65 46.2


User provided reference genes

Program Settings