Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g080550.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 1.0e-51 206.5 103 100.0
Sopen02g025250 Solanum pennellii HOM05D011575 ORTHO05D004912 1.8e-48 195.7 107 94.4
PGSC0003DMG400016452 Solanum tuberosum HOM05D011575 ORTHO05D004912 2.0e-39 165.6 107 81.3
Sopen02g025260 Solanum pennellii HOM05D011575 ORTHO05D004912 1.8e-16 89.4 95 53.7
Solyc02g080560.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 2.4e-16 89.0 95 52.6
SGA_v2.0_scaffold4G01914 Striga asiatica HOM05D011575 ORTHO05D004912 2.4e-16 89.0 92 53.3
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 5.3e-16 87.8 95 52.6
SalBow8G3401 Salvia bowleyana HOM05D011575 ORTHO05D004912 3.8e-14 81.6 90 52.2
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 4.9e-14 81.3 86 53.5
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 4.9e-14 81.3 90 51.1
MSTRG.7209 Avicennia marina HOM05D011575 ORTHO05D004912 1.9e-13 79.3 104 48.1
SGA_v2.0_scaffold7G03838 Striga asiatica HOM05D011575 ORTHO05D004912 3.2e-13 78.6 94 47.9
Oeu002741.1 Olea europaea HOM05D011575 ORTHO05D004912 1.2e-12 76.6 90 48.9
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 6.0e-12 74.3 91 45.1
unitig_0.g942 Utricularia gibba HOM05D011575 ORTHO05D004912 3.0e-11 72.0 94 45.7
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 2.1e-09 65.9 97 41.2
Medtr8g468960 Medicago truncatula HOM05D011727 ORTHO05D004912 6.2e-09 64.3 88 47.7
Glyma.14G163600 Glycine max HOM05D011727 ORTHO05D004912 1.4e-08 63.2 85 44.7
Glyma.13G082600 Glycine max HOM05D011727 ORTHO05D004912 1.8e-08 62.8 103 38.8
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 2.4e-08 62.4 97 41.2
RcHm_v2.0_Chr5g0002951 Rosa chinensis HOM05D011727 ORTHO05D004912 3.4e-07 58.5 89 42.7
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 5.8e-07 57.8 83 44.6
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 5.8e-07 57.8 82 42.7
Ca_22861_v3 Cicer arietinum L. HOM05D011727 ORTHO05D004912 9.9e-07 57.0 96 41.7
FAN25G2989 Fragaria x ananassa HOM05D011727 ORTHO05D004912 9.9e-07 57.0 93 37.6
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 9.9e-07 57.0 99 39.4
FAN21G2105 Fragaria x ananassa HOM05D011727 ORTHO05D004912 1.3e-06 56.6 95 36.8
Medtr8g468940 Medicago truncatula HOM05D011727 ORTHO05D004912 1.7e-06 56.2 90 43.3
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 1.7e-06 56.2 98 35.7
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 3.8e-06 55.1 95 38.9
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 3.8e-06 55.1 91 41.8
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 3.8e-06 55.1 104 42.3
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 4.9e-06 54.7 89 38.2
FvH4_3g02050 Fragaria vesca HOM05D011727 ORTHO05D004912 6.4e-06 54.3 95 35.8
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 8.4e-06 53.9 94 36.2
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 8.4e-06 53.9 101 37.6
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 8.4e-06 53.9 82 43.9
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 8.4e-06 53.9 99 38.4


User provided reference genes

Program Settings