Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g080275.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.3e-95 351.7 175 100.0
Peaxi162Scf00030g02119 Petunia axillaris HOM05D000533 ORTHO05D006151 1.0e-72 276.9 140 98.6
Peaxi162Scf00269g01411 Petunia axillaris HOM05D000533 ORTHO05D006151 1.0e-72 276.9 140 98.6
Solyc00g500041.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.4e-72 276.6 139 100.0
Solyc00g500086.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.4e-72 276.6 139 100.0
Solyc00g500123.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.4e-72 276.6 139 100.0
Solyc00g500193.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.4e-72 276.6 139 100.0
CAN.G1045.10 Capsicum annuum HOM05D000533 ORTHO05D002807 5.7e-71 271.2 139 97.8
CAN.G1298.18 Capsicum annuum HOM05D000533 ORTHO05D002807 5.7e-71 271.2 139 97.8
CAN.G1526.1 Capsicum annuum HOM05D000533 ORTHO05D002807 5.7e-71 271.2 139 97.8
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 3.5e-68 261.9 140 92.9
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 3.5e-68 261.9 140 92.9
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 3.5e-68 261.9 140 92.9
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 3.5e-68 261.9 140 92.9
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 3.5e-68 261.9 140 92.9
Solyc11g021230.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.3e-67 260.0 139 94.2
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 2.2e-67 259.2 139 92.8
HanXRQChr00c0289g0573151 Helianthus annuus HOM05D000533 ORTHO05D002807 2.9e-67 258.8 166 80.1
PGR111G0022 Punica granatum HOM05D000533 ORTHO05D002807 3.8e-67 258.5 139 92.1
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 6.5e-67 257.7 140 90.7
Lju5009P0T26 Lonicera japonica HOM05D000533 ORTHO05D002807 1.1e-66 256.9 139 92.1
SalBow1G0006 Salvia bowleyana HOM05D000533 ORTHO05D002807 4.2e-66 255.0 139 90.6
Migut.D01249 Erythranthe guttata HOM05D000533 ORTHO05D002807 1.2e-65 253.4 139 90.6
DCAR_032541 Daucus carota HOM05D000533 ORTHO05D002807 2.7e-65 252.3 139 90.6
EL10Ac1g02291 Beta vulgaris HOM05D000533 ORTHO05D002807 1.8e-64 249.6 139 89.2
EL10As15g24098 Beta vulgaris HOM05D000533 ORTHO05D002807 1.8e-64 249.6 139 89.2
Sed0004290 Sechium edule HOM05D000533 ORTHO05D002807 1.3e-62 243.4 139 87.1
Sed0023589 Sechium edule HOM05D000533 ORTHO05D002807 1.3e-62 243.4 139 87.1
PSO548G0012 Papaver somniferum HOM05D000533 ORTHO05D002807 4.8e-62 241.5 139 87.8
MELO3C000179.2 Cucumis melo HOM05D000533 ORTHO05D002807 3.1e-61 238.8 139 86.3
ATCG01100 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 4.1e-61 238.4 139 84.9
C09p40310 Brassica napus HOM05D000533 ORTHO05D002807 5.3e-61 238.0 139 85.6
BolSC29t60509H Brassica oleracea HOM05D000533 ORTHO05D002807 5.3e-61 238.0 139 85.6
BolSC29t60549H Brassica oleracea HOM05D000533 ORTHO05D002807 5.3e-61 238.0 139 85.6
BolSC35t60689H Brassica oleracea HOM05D000533 ORTHO05D002807 5.3e-61 238.0 139 85.6
BolSC35t60707H Brassica oleracea HOM05D000533 ORTHO05D002807 5.3e-61 238.0 139 85.6
BolSC44t60825H Brassica oleracea HOM05D000533 ORTHO05D002807 5.3e-61 238.0 143 83.2
BolSC47t61062H Brassica oleracea HOM05D000533 ORTHO05D002807 5.3e-61 238.0 139 85.6
BolSC49t61146H Brassica oleracea HOM05D000533 ORTHO05D002807 5.3e-61 238.0 139 85.6
BraSC103t45432Z Brassica rapa HOM05D000533 ORTHO05D002807 5.3e-61 238.0 139 85.6
BraSC143t45657Z Brassica rapa HOM05D000533 ORTHO05D002807 5.3e-61 238.0 139 85.6
BolC9t56913H Brassica oleracea HOM05D000533 ORTHO05D002807 7.0e-61 237.7 139 85.6
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 9.1e-61 237.3 140 85.0
Medtr4g050810 Medicago truncatula HOM05D000533 ORTHO05D006151 9.1e-61 237.3 140 85.0
LjContig00318g0007609 Lotus japonicus HOM05D000533 ORTHO05D002807 1.2e-60 236.9 139 86.3
LjContig00319g0005103 Lotus japonicus HOM05D000533 ORTHO05D002807 1.2e-60 236.9 139 86.3
AL9U11959 Arabidopsis lyrata HOM05D000533 ORTHO05D002807 3.5e-60 235.3 139 84.2
arahy.Tifrunner.gnm1.ann1.RBM67I Arachis hypogaea HOM05D000533 ORTHO05D002807 3.5e-60 235.3 139 84.9
CARHR282470 Cardamine hirsuta HOM05D000533 ORTHO05D002807 1.3e-59 233.4 139 84.9
arahy.Tifrunner.gnm1.ann1.U57TMC Arachis hypogaea HOM05D000533 ORTHO05D002807 8.5e-59 230.7 139 83.5
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 8.5e-59 230.7 146 81.5
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 1.5e-58 229.9 139 82.7
arahy.Tifrunner.gnm1.ann1.CXW88U Arachis hypogaea HOM05D000533 ORTHO05D002807 2.5e-58 229.2 139 82.7
Gohir.1Z049702 Gossypium hirsutum HOM05D000533 ORTHO05D002807 3.6e-57 225.3 127 87.4
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 2.7e-52 209.1 140 76.4
Lsat_1_v5_gn_4_118121 Lactuca sativa HOM05D000533 ORTHO05D002807 7.7e-52 207.6 140 75.7
Nitab4.5_0001313g0090 Nicotiana tabacum HOM05D000533 ORTHO05D002807 7.2e-50 201.1 124 83.1
HanXRQChr00c0504g0575311 Helianthus annuus HOM05D000533 ORTHO05D006151 9.4e-50 200.7 133 79.7
Sed0023659 Sechium edule HOM05D000533 ORTHO05D002807 2.1e-49 199.5 139 74.8
BolC2t10599H Brassica oleracea HOM05D000533 ORTHO05D002807 3.6e-49 198.7 123 81.3
BraSC58t46464Z Brassica rapa HOM05D000533 ORTHO05D002807 2.6e-47 192.6 144 72.2
Lalb_Chr07g0191801 Lupinus albus HOM05D000533 ORTHO05D002807 1.4e-45 186.8 114 84.2
Sed0007463 Sechium edule HOM05D000533 ORTHO05D002807 2.4e-45 186.0 139 71.2
arahy.Tifrunner.gnm1.ann1.F0S3GF Arachis hypogaea HOM05D000533 ORTHO05D002807 4.1e-45 185.3 114 82.5
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 6.6e-43 177.9 108 84.3
EL10As15g24139 Beta vulgaris HOM05D000533 ORTHO05D002807 1.2e-41 173.7 130 70.8
Nn1g07318 Nelumbo nucifera HOM05D000533 ORTHO05D002807 8.0e-41 171.0 88 93.2
Gohir.D05G308833 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.2e-39 167.2 95 84.2
CSS0023353 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D006151 5.7e-39 164.9 133 64.7
Glyma.18G155550 Glycine max HOM05D000533 ORTHO05D002807 5.7e-39 164.9 125 74.4
Nitab4.5_0001783g0140 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.7e-39 164.9 97 86.6
Solyc11g050760.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.7e-38 163.3 90 92.2
Gohir.A10G063750 Gossypium hirsutum HOM05D000533 ORTHO05D002807 4.1e-37 158.7 84 90.5
FAN01G0230 Fragaria x ananassa HOM05D000533 ORTHO05D002807 5.4e-37 158.3 97 81.4
Nitab4.5_0017884g0010 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.7e-35 153.3 101 76.2
Gorai.009G395200 Gossypium raimondii HOM05D000533 ORTHO05D002807 6.6e-35 151.4 139 61.2
Duzib093G2216 Durio zibethinus HOM05D000533 ORTHO05D002807 5.6e-34 148.3 139 61.9
Gohir.D11G334101 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.8e-32 143.3 82 82.9
Eucgr.B03250 Eucalyptus grandis HOM05D000533 ORTHO05D002807 8.9e-32 141.0 72 93.1
TPR.G31189 Trifolium pratense HOM05D000533 ORTHO05D002807 3.2e-29 132.5 81 82.7
SMO086G0018 Selaginella moellendorffii HOM05D000533 ORTHO05D002807 4.1e-29 132.1 146 53.4
Lsat_1_v5_gn_8_62921 Lactuca sativa HOM05D000533 ORTHO05D002807 5.4e-29 131.7 70 91.4
HanXRQChr00c0336g0573691 Helianthus annuus HOM05D000533 ORTHO05D002807 9.2e-29 131.0 78 88.5
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 9.2e-29 131.0 78 88.5
HanXRQChr01g0020061 Helianthus annuus HOM05D000533 ORTHO05D006151 1.2e-28 130.6 147 53.7
Solyc02g011790.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 8.6e-27 124.4 111 64.9
COL.COLO4_02137 Corchorus olitorius HOM05D000533 ORTHO05D002807 1.9e-26 123.2 140 47.1
BraSC138t45532Z Brassica rapa HOM05D000533 ORTHO05D002807 9.5e-26 120.9 116 60.3
Nitab4.5_0001783g0070 Nicotiana tabacum HOM05D000216 ORTHO05D002807 2.1e-25 119.8 69 88.4
Nn1g00560 Nelumbo nucifera HOM05D000533 ORTHO05D002807 1.1e-24 117.5 61 93.4
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 1.4e-24 117.1 79 74.7
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 1.4e-24 117.1 79 74.7
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 1.4e-24 117.1 79 74.7
CsaV3_1G022940 Cucumis sativus L. HOM05D000533 ORTHO05D002807 1.4e-24 117.1 59 94.9
Medtr4g451555 Medicago truncatula HOM05D000533 ORTHO05D002807 8.9e-24 114.4 71 80.3
Lalb_Chr09g0335431 Lupinus albus HOM05D000533 ORTHO05D002807 2.2e-22 109.8 88 67.0
Psat1g104920 Pisum sativum HOM05D000533 ORTHO05D002807 6.4e-22 108.2 54 94.4
Lsat_1_v5_gn_5_174020 Lactuca sativa HOM05D000533 ORTHO05D002807 1.2e-20 104.0 65 75.4
RcHm_v2.0_CPg0502741 Rosa chinensis HOM05D000533 ORTHO05D002807 9.5e-18 94.4 50 92.0
HanXRQChr00c0703g0576931 Helianthus annuus HOM05D000533 ORTHO05D002807 1.2e-15 87.4 68 69.1
Psat0s1160g0360 Pisum sativum HOM05D000533 ORTHO05D006151 5.4e-13 78.6 51 74.5
Psat0s6989g0200 Pisum sativum HOM05D000533 ORTHO05D006151 5.4e-13 78.6 51 74.5
Psat3g095000 Pisum sativum HOM05D000533 ORTHO05D006151 5.4e-13 78.6 51 74.5
Psat6g140600 Pisum sativum HOM05D000533 ORTHO05D006151 5.4e-13 78.6 51 74.5
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 5.4e-13 78.6 80 55.0
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 1.6e-12 77.0 39 87.2
CARHR060450 Cardamine hirsuta HOM05D000533 ORTHO05D002807 1.0e-11 74.3 60 66.7
Gohir.D04G093016 Gossypium hirsutum HOM05D000533 ORTHO05D002807 3.0e-11 72.8 136 38.2
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 6.2e-09 65.1 64 50.0
HanXRQChr01g0000271 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-08 63.5 35 85.7
EL10Ac6g13955 Beta vulgaris HOM05D000533 ORTHO05D002807 5.8e-07 58.5 28 92.9


User provided reference genes

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