Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.9e-103 379.4 229 100.0
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 6.3e-70 268.1 170 98.8
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 9.1e-69 264.2 170 98.2
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 7.7e-68 261.2 170 95.9
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 3.6e-65 252.3 181 80.1
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 2.1e-57 226.5 170 72.4
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 3.0e-56 222.6 170 71.8
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 3.0e-56 222.6 170 72.9
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 5.2e-56 221.9 169 71.0
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 6.8e-56 221.5 169 70.4
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 1.2e-55 220.7 170 72.4
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 2.0e-55 219.9 170 70.0
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 2.6e-55 219.5 170 69.4
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 5.7e-55 218.4 169 71.0
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 1.3e-54 217.2 170 70.6
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 1.7e-54 216.9 170 68.2
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 4.8e-54 215.3 170 70.0
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 6.3e-54 214.9 170 68.8
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 8.3e-54 214.5 170 67.6
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.4e-53 213.8 170 75.3
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.8e-53 213.4 170 68.2
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.8e-53 213.4 170 68.2
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 5.4e-53 211.8 170 67.1
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 7.0e-53 211.5 170 74.1
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 2.7e-52 209.5 170 65.9
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 4.5e-52 208.8 170 66.5
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 7.7e-52 208.0 166 68.1
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 7.7e-52 208.0 212 58.0
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 1.0e-51 207.6 170 65.9
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 1.0e-51 207.6 170 65.9
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 1.7e-51 206.8 170 65.9
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 3.8e-51 205.7 170 67.6
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 5.0e-51 205.3 169 64.5
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 5.0e-51 205.3 170 67.1
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 8.6e-51 204.5 170 67.1
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 1.1e-50 204.1 192 60.9
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 1.5e-50 203.8 170 64.7
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 3.3e-50 202.6 170 65.9
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.2e-49 200.7 212 56.6
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 1.6e-49 200.3 168 65.5
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 2.8e-49 199.5 169 63.9
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 4.7e-49 198.7 118 93.2
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 1.8e-48 196.8 170 66.5
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 4.0e-48 195.7 170 65.9
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 6.8e-48 194.9 170 64.7
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 1.2e-47 194.1 170 65.9
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 1.2e-47 194.1 169 61.5
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 1.5e-47 193.7 171 63.2
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 2.0e-47 193.4 170 64.7
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 5.7e-47 191.8 171 62.6
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 5.7e-47 191.8 170 63.5
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 1.3e-46 190.7 171 63.7
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 1.3e-46 190.7 170 62.4
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 1.7e-46 190.3 170 66.5
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 2.2e-46 189.9 170 66.5
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 2.8e-46 189.5 197 58.4
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 4.9e-46 188.7 170 64.1
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 6.3e-46 188.3 171 61.4
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 8.3e-46 188.0 170 62.4
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 8.3e-46 188.0 192 60.4
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 1.4e-45 187.2 181 59.1
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 1.8e-45 186.8 170 62.9
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 3.2e-45 186.0 205 55.6
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 4.1e-45 185.7 183 57.4
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 7.0e-45 184.9 171 59.6
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 9.2e-45 184.5 171 61.4
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 1.2e-44 184.1 170 61.8
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 4.5e-44 182.2 171 58.5
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 1.3e-43 180.6 145 68.3
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 3.9e-43 179.1 169 59.2
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 9.5e-42 174.5 146 66.4
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.2e-41 174.1 200 55.5
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 1.2e-39 167.5 150 63.3
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 1.5e-39 167.2 170 58.8
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 3.4e-39 166.0 164 55.5
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 2.9e-38 162.9 113 78.8
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 4.9e-38 162.2 150 62.0
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 3.2e-37 159.5 170 60.6
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 4.1e-37 159.1 171 56.7
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 1.6e-36 157.1 118 71.2
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.5e-36 156.0 146 61.0
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 6.0e-36 155.2 156 59.0
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 6.0e-36 155.2 144 61.8
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 7.8e-36 154.8 114 71.1
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 1.3e-35 154.1 167 55.7
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 8.6e-35 151.4 114 72.8
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 1.9e-34 150.2 118 67.8
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 3.3e-34 149.4 213 47.4
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 1.2e-33 147.5 171 51.5
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 3.6e-33 146.0 170 61.8
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 3.6e-33 146.0 216 44.9
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 3.6e-33 146.0 170 52.4
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 5.2e-32 142.1 114 66.7
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 8.9e-32 141.4 170 50.0
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.5e-31 140.6 171 46.2
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 5.8e-31 138.7 164 49.4
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 7.5e-31 138.3 191 41.9
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 4.9e-30 135.6 146 53.4
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 1.6e-28 130.6 170 58.8
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 8.6e-27 124.8 175 50.3
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 8.6e-27 124.8 169 57.4
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 4.3e-26 122.5 163 39.3
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 1.4e-24 117.5 170 58.2
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 3.7e-22 109.4 174 44.8
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 7.3e-18 95.1 173 40.5
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 7.3e-18 95.1 170 49.4
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 9.6e-18 94.7 164 33.5
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 4.0e-16 89.4 75 64.0
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 1.5e-15 87.4 148 35.8
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 2.2e-14 83.6 90 55.6
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 3.5e-12 76.3 161 37.3
Eucgr.B00901 Eucalyptus grandis HOM05D006133 ORTHO05D007855 5.1e-11 72.4 70 58.6
Eucgr.B00955 Eucalyptus grandis HOM05D006133 ORTHO05D007855 5.1e-11 72.4 70 58.6
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 4.3e-10 69.3 65 52.3
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 1.6e-09 67.4 169 36.1
A05p11770 Brassica napus HOM05D006133 ORTHO05D007855 2.8e-09 66.6 75 52.0
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 4.0e-08 62.8 63 58.7


User provided reference genes

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