Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.0e-64 250.0 134 100.0
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 2.2e-51 205.7 112 99.1
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 3.7e-46 188.3 112 91.1
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 1.3e-43 179.9 112 89.3
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 1.9e-42 176.0 115 85.2
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 2.3e-35 152.5 103 77.7
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 3.9e-35 151.8 111 73.0
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 1.1e-34 150.2 103 76.7
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 3.3e-34 148.7 97 86.6
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 9.5e-34 147.1 111 70.3
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.0e-32 143.7 103 74.8
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 1.0e-32 143.7 114 70.2
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 2.3e-32 142.5 112 67.9
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.3e-32 142.5 112 67.9
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 6.8e-32 141.0 109 69.7
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 8.9e-32 140.6 111 70.3
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 1.2e-31 140.2 102 73.5
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 1.5e-31 139.8 111 70.3
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 4.4e-31 138.3 103 72.8
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 7.5e-31 137.5 109 67.9
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 1.7e-30 136.3 103 71.8
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 2.2e-30 136.0 106 72.6
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 2.2e-30 136.0 109 66.1
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 2.9e-30 135.6 110 68.2
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 4.9e-30 134.8 109 67.9
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.4e-29 133.3 103 70.9
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.4e-29 133.3 105 70.5
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 4.1e-29 131.7 103 69.9
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 4.1e-29 131.7 112 66.1
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 4.1e-29 131.7 99 72.7
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 4.1e-29 131.7 112 67.9
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 5.4e-29 131.3 110 66.4
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 5.4e-29 131.3 110 69.1
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 7.0e-29 131.0 109 64.2
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 9.2e-29 130.6 108 66.7
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 1.6e-28 129.8 109 65.1
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 2.7e-28 129.0 109 63.3
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 3.5e-28 128.6 109 66.1
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 4.6e-28 128.3 112 67.0
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 4.6e-28 128.3 106 63.2
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 4.6e-28 128.3 112 67.0
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 6.0e-28 127.9 102 68.6
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 7.8e-28 127.5 118 64.4
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 1.0e-27 127.1 106 62.3
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 1.7e-27 126.3 105 68.6
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 2.3e-27 125.9 109 63.3
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 2.3e-27 125.9 99 71.7
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 3.0e-27 125.6 109 64.2
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 3.9e-27 125.2 110 61.8
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 5.0e-27 124.8 103 65.0
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 5.0e-27 124.8 124 61.3
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 6.6e-27 124.4 109 63.3
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 8.6e-27 124.0 99 73.7
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.9e-26 122.9 103 65.0
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 1.9e-26 122.9 110 67.3
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.9e-26 122.9 106 63.2
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 2.5e-26 122.5 109 61.5
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 2.5e-26 122.5 109 62.4
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 3.3e-26 122.1 110 63.6
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 3.3e-26 122.1 110 63.6
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 3.3e-26 122.1 103 64.1
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 5.6e-26 121.3 103 64.1
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 5.6e-26 121.3 129 56.6
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 5.6e-26 121.3 113 64.6
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 1.6e-25 119.8 106 66.0
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.8e-25 119.0 102 61.8
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 2.8e-25 119.0 111 61.3
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 1.4e-24 116.7 100 59.0
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.8e-24 116.3 101 60.4
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 1.8e-24 116.3 95 70.5
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 2.3e-24 115.9 107 58.9
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 1.5e-23 113.2 104 55.8
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 5.8e-23 111.3 94 68.1
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 7.5e-23 110.9 83 73.5
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 9.8e-23 110.5 104 56.7
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 9.8e-23 110.5 107 57.0
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 1.7e-22 109.8 101 55.4
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 3.7e-22 108.6 97 56.7
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 3.7e-22 108.6 107 55.1
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 3.7e-22 108.6 105 58.1
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 4.9e-22 108.2 107 55.1
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 4.9e-22 108.2 107 55.1
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 1.9e-21 106.3 103 57.3
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 7.1e-21 104.4 113 51.3
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.2e-20 103.6 82 72.0
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 3.5e-20 102.1 127 48.0
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 3.5e-20 102.1 99 58.6
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 4.6e-20 101.7 125 48.8
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 4.6e-20 101.7 83 69.9
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 1.3e-19 100.1 158 40.5
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 3.0e-19 99.0 79 69.6
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 1.9e-18 96.3 83 66.3
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 5.6e-18 94.7 104 51.9
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 2.8e-17 92.4 94 50.0
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 4.0e-16 88.6 101 48.5
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 5.2e-16 88.2 66 74.2
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 6.8e-16 87.8 94 52.1
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 6.4e-14 81.3 67 67.2
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 1.9e-13 79.7 75 57.3
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.0e-11 73.9 106 40.6
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 1.3e-11 73.6 91 47.3
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 8.6e-11 70.9 107 42.1
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 8.9e-08 60.8 111 37.8
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 9.9e-07 57.4 93 44.1


User provided reference genes

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