Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 4.9e-122 441.0 208 100.0
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 3.2e-121 438.3 208 99.5
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 4.5e-115 417.9 215 93.0
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 5.8e-115 417.5 223 89.7
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 6.0e-112 407.5 201 95.0
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 1.0e-111 406.8 194 97.9
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 3.9e-111 404.8 208 91.3
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 1.8e-108 396.0 208 89.4
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 2.4e-108 395.6 209 89.0
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 1.5e-107 392.9 208 88.5
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 2.6e-107 392.1 208 89.4
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 4.5e-107 391.3 208 88.9
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 4.5e-107 391.3 208 88.9
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 5.9e-107 391.0 209 88.5
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 1.3e-106 389.8 209 87.1
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 1.3e-106 389.8 208 87.5
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.9e-106 388.7 208 87.5
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 3.8e-106 388.3 207 89.4
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 6.5e-106 387.5 207 88.4
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 6.5e-106 387.5 210 87.6
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 6.5e-106 387.5 209 87.6
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 8.5e-106 387.1 209 87.6
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 8.5e-106 387.1 208 86.5
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 1.4e-105 386.3 207 88.9
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 1.9e-105 386.0 209 87.1
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 2.5e-105 385.6 207 89.9
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 3.2e-105 385.2 207 87.9
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 4.2e-105 384.8 206 86.4
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 7.2e-105 384.0 208 86.5
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 7.2e-105 384.0 207 87.4
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 2.7e-104 382.1 209 86.6
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 3.6e-104 381.7 207 85.0
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 4.6e-104 381.3 209 86.1
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 6.1e-104 380.9 209 86.1
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 6.1e-104 380.9 208 87.5
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 1.0e-103 380.2 208 87.0
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.4e-103 379.8 208 87.0
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 2.3e-103 379.0 209 85.6
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 2.3e-103 379.0 208 86.5
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 3.9e-103 378.3 207 87.4
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 1.9e-102 375.9 208 86.5
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 1.9e-102 375.9 208 84.1
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 2.5e-102 375.6 218 83.9
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 3.3e-102 375.2 209 84.7
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 4.3e-102 374.8 207 85.0
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 1.3e-101 373.2 208 85.6
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 1.7e-101 372.9 209 86.6
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.7e-101 372.9 208 85.6
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.7e-101 372.9 204 87.3
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 2.2e-101 372.5 208 85.1
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 2.2e-101 372.5 209 83.3
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 2.8e-101 372.1 207 85.5
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 2.8e-101 372.1 208 85.1
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 2.8e-101 372.1 208 85.1
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 2.8e-101 372.1 207 86.5
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 2.8e-101 372.1 208 87.0
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 2.8e-101 372.1 208 86.1
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 3.7e-101 371.7 207 86.0
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 6.3e-101 370.9 208 85.1
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 6.3e-101 370.9 208 84.1
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 6.3e-101 370.9 208 85.1
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 1.1e-100 370.2 208 84.1
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 1.4e-100 369.8 208 84.6
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 1.4e-100 369.8 208 85.6
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 1.4e-100 369.8 208 85.6
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 2.4e-100 369.0 208 82.7
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 4.1e-100 368.2 208 85.1
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 5.3e-100 367.9 208 84.6
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 6.9e-100 367.5 208 84.6
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.2e-99 366.7 205 83.9
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 2.6e-99 365.5 202 83.7
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 5.9e-99 364.4 208 83.2
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 5.9e-99 364.4 208 83.7
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 1.0e-98 363.6 208 83.2
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 1.0e-98 363.6 208 82.7
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 8.5e-98 360.5 208 82.2
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.9e-97 359.4 193 85.5
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 3.2e-97 358.6 208 81.2
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 6.1e-96 354.4 208 80.8
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 7.9e-96 354.0 208 80.3
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 7.9e-96 354.0 193 85.0
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 1.4e-95 353.2 208 79.3
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 3.9e-95 351.7 208 80.8
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 6.7e-95 350.9 208 78.8
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.1e-94 350.1 208 78.4
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 2.0e-94 349.4 208 77.9
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 2.0e-94 349.4 208 78.8
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 2.6e-94 349.0 208 77.9
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 2.6e-94 349.0 208 77.9
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 7.4e-94 347.4 198 84.3
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 4.8e-93 344.7 202 81.7
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 4.1e-92 341.7 208 76.9
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 6.5e-90 334.3 209 78.0
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 7.2e-89 330.9 208 73.6
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.2e-88 330.1 208 77.4
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.8e-87 326.2 177 84.7
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 3.9e-87 325.1 193 78.2
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 3.9e-87 325.1 193 77.2
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 8.8e-87 323.9 193 76.7
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 1.1e-86 323.6 194 76.8
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 3.3e-86 322.0 193 76.7
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 4.4e-86 321.6 192 77.1
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 4.4e-86 321.6 192 77.1
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 7.4e-86 320.9 193 76.2
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 9.7e-86 320.5 213 71.8
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 3.7e-85 318.5 209 72.2
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.1e-84 317.0 202 75.7
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 7.0e-84 314.3 207 71.5
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.2e-83 313.5 207 71.5
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 5.0e-82 308.1 215 68.8
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 6.5e-82 307.8 224 70.5
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 9.4e-81 303.9 171 83.6
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 2.1e-80 302.8 190 78.4
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.4e-79 300.1 192 75.0
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 1.5e-78 296.6 207 71.0
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 9.7e-78 293.9 208 73.1
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 8.2e-77 290.8 203 66.5
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.2e-75 287.0 185 75.1
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 4.2e-73 278.5 208 68.8
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 1.2e-70 270.4 217 61.8
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 5.5e-65 251.5 203 63.5
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 7.2e-65 251.1 131 87.8
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 1.8e-60 236.5 172 64.5
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 1.0e-58 230.7 145 75.9
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 4.6e-35 152.1 220 39.1
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.6e-24 117.1 114 58.8
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 1.4e-23 114.0 61 82.0
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 5.3e-23 112.1 78 66.7
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 1.8e-15 87.0 49 77.6
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 2.9e-13 79.7 186 33.9
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 7.6e-06 55.1 40 70.0


User provided reference genes

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