Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g072560.1 Solanum lycopersicum HOM05D000828 ORTHO05D000623 1.1e-63 246.5 126 100.0
Sopen02g021530 Solanum pennellii HOM05D000828 ORTHO05D000623 4.4e-49 198.0 105 96.2
PGSC0003DMG400028480 Solanum tuberosum HOM05D000828 ORTHO05D000623 2.7e-38 162.2 105 77.1
Sopen02g021540 Solanum pennellii HOM05D000828 ORTHO05D000623 5.1e-37 157.9 105 76.2
Solyc02g072570.2 Solanum lycopersicum HOM05D000828 ORTHO05D000623 1.2e-35 153.3 105 73.3
Sopen02g021520 Solanum pennellii HOM05D000828 ORTHO05D000623 1.5e-33 146.4 105 67.6
Nitab4.5_0013297g0020 Nicotiana tabacum HOM05D000828 ORTHO05D000623 6.8e-26 120.9 122 54.9
CAN.G370.95 Capsicum annuum HOM05D000828 ORTHO05D000623 8.4e-24 114.0 110 54.5
Peaxi162Scf01009g00022 Petunia axillaris HOM05D000828 ORTHO05D000623 2.4e-23 112.5 106 56.6
Nitab4.5_0003997g0020 Nicotiana tabacum HOM05D000828 ORTHO05D000623 3.0e-21 105.5 84 67.9
Peaxi162Scf00734g00029 Petunia axillaris HOM05D000828 ORTHO05D000623 8.7e-21 104.0 104 51.0
Sopen03g002130 Solanum pennellii HOM05D000828 ORTHO05D000623 3.6e-19 98.6 101 51.5
Nitab4.5_0008430g0010 Nicotiana tabacum HOM05D000828 ORTHO05D000623 8.1e-19 97.4 107 52.3
CAN.G370.97 Capsicum annuum HOM05D000828 ORTHO05D000623 1.1e-18 97.1 102 50.0
Solyc03g006120.4 Solanum lycopersicum HOM05D000828 ORTHO05D000623 1.4e-18 96.7 101 49.5
Sopen02g021580 Solanum pennellii HOM05D000828 ORTHO05D000623 4.0e-18 95.1 103 49.5
Haze_06212 Corylus avellana HOM05D000828 ORTHO05D000623 2.0e-17 92.8 104 49.0
Nitab4.5_0000462g0190 Nicotiana tabacum HOM05D000828 ORTHO05D000623 2.6e-17 92.4 106 49.1
PGSC0003DMG400028482 Solanum tuberosum HOM05D000828 ORTHO05D000623 9.9e-17 90.5 102 50.0
Migut.H01437 Erythranthe guttata HOM05D000828 ORTHO05D000623 2.2e-16 89.4 119 46.2
QL05p047773 Quercus lobata HOM05D000828 ORTHO05D000623 2.9e-16 89.0 111 45.9
QL10p017450 Quercus lobata HOM05D000828 ORTHO05D000623 2.9e-16 89.0 111 45.9
Nitab4.5_0003711g0010 Nicotiana tabacum HOM05D000828 ORTHO05D000623 6.4e-16 87.8 106 46.2
ClCG01G023790 Citrullus lanatus HOM05D000828 ORTHO05D000623 1.1e-15 87.0 132 41.7
Migut.H01438 Erythranthe guttata HOM05D000828 ORTHO05D000623 1.9e-15 86.3 124 45.2
Hma1.2p1_0215F.1_g090900 Hydrangea macrophylla HOM05D000828 ORTHO05D000623 1.9e-15 86.3 99 48.5
PGSC0003DMG400038480 Solanum tuberosum HOM05D000828 ORTHO05D000623 2.4e-15 85.9 76 53.9
Cpa.g.c34917 Carica papaya HOM05D000828 ORTHO05D000623 3.2e-15 85.5 112 44.6
MELO3C007209.2 Cucumis melo HOM05D000828 ORTHO05D000623 3.2e-15 85.5 129 39.5
CsaV3_6G050950 Cucumis sativus L. HOM05D000828 ORTHO05D000623 4.2e-15 85.1 129 39.5
unitig_26.g9348 Utricularia gibba HOM05D000828 ORTHO05D000623 5.4e-15 84.7 95 49.5
CiPaw.10G060200 Carya illinoinensis HOM05D000828 ORTHO05D000623 1.2e-14 83.6 114 40.4
SalBow7G4758 Salvia bowleyana HOM05D000828 ORTHO05D000623 1.6e-14 83.2 84 53.6
Migut.M01026 Erythranthe guttata HOM05D000828 ORTHO05D000623 3.5e-14 82.0 119 41.2
Nitab4.5_0000605g0010 Nicotiana tabacum HOM05D000828 ORTHO05D000623 3.5e-14 82.0 113 41.6
Prupe.4G062800 Prunus persica HOM05D000828 ORTHO05D000623 6.0e-14 81.3 99 46.5
Actinidia16788 Actinidia chinensis HOM05D000828 ORTHO05D000623 7.9e-14 80.9 101 46.5
Peaxi162Scf00854g00031 Petunia axillaris HOM05D000828 ORTHO05D000623 1.0e-13 80.5 115 39.1
Cc02_g15150 Coffea canephora HOM05D000828 ORTHO05D000623 1.3e-13 80.1 104 43.3
Migut.A00056 Erythranthe guttata HOM05D000828 ORTHO05D000623 1.3e-13 80.1 103 44.7
FAN11G2205 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.3e-13 80.1 99 48.5
FAN25G3729 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.3e-13 80.1 119 42.9
Nitab4.5_0013297g0010 Nicotiana tabacum HOM05D000828 ORTHO05D000623 2.3e-13 79.3 113 41.6
PGSC0003DMG400028441 Solanum tuberosum HOM05D000828 ORTHO05D000623 2.3e-13 79.3 109 42.2
FvH4_3g07640 Fragaria vesca HOM05D000828 ORTHO05D000623 3.9e-13 78.6 99 47.5
Manes.17G057000 Manihot esculenta HOM05D000828 ORTHO05D000623 3.9e-13 78.6 102 47.1
Solyc02g073570.1 Solanum lycopersicum HOM05D000828 ORTHO05D000623 3.9e-13 78.6 108 42.6
CAN.G1286.7 Capsicum annuum HOM05D000828 ORTHO05D000623 5.1e-13 78.2 95 44.2
RcHm_v2.0_Chr5g0011041 Rosa chinensis HOM05D000828 ORTHO05D000623 6.6e-13 77.8 99 44.4
Ciclev10017912m.g Citrus clementina HOM05D000828 ORTHO05D000623 1.1e-12 77.0 95 44.2
PGSC0003DMG400026742 Solanum tuberosum HOM05D000828 ORTHO05D000623 1.5e-12 76.6 67 55.2
CARHR225540 Cardamine hirsuta HOM05D000828 ORTHO05D000623 1.9e-12 76.3 86 43.0
A08p13940 Brassica napus HOM05D000828 ORTHO05D000623 4.3e-12 75.1 107 40.2
BraA08t33382Z Brassica rapa HOM05D000828 ORTHO05D000623 4.3e-12 75.1 107 40.2
Dinv40694 Davidia involucrata HOM05D000828 ORTHO05D000623 4.3e-12 75.1 101 43.6
Sp7g17400 Schrenkiella parvula HOM05D000828 ORTHO05D000623 5.6e-12 74.7 100 42.0
AL7G35560 Arabidopsis lyrata HOM05D000828 ORTHO05D000623 7.4e-12 74.3 106 40.6
Sopen02g021560 Solanum pennellii HOM05D000828 ORTHO05D000623 9.6e-12 73.9 89 47.2
BcaC09g51463 Brassica carinata HOM05D000828 ORTHO05D000623 1.6e-11 73.2 129 37.2
C01p12640 Brassica napus HOM05D000828 ORTHO05D000623 1.6e-11 73.2 129 37.2
MBI07_g09557_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 1.6e-11 73.2 97 40.2
Carub.0007s2256 Capsella rubella HOM05D000828 ORTHO05D000623 2.1e-11 72.8 102 42.2
Sed0024596 Sechium edule HOM05D000828 ORTHO05D000623 2.1e-11 72.8 86 41.9
Aqoxy1G02028 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 3.6e-11 72.0 87 46.0
AT4G18690 Arabidopsis thaliana HOM05D000828 ORTHO05D000623 4.8e-11 71.6 106 38.7
A01p10700 Brassica napus HOM05D000828 ORTHO05D000623 4.8e-11 71.6 104 40.4
BolC1t01240H Brassica oleracea HOM05D000828 ORTHO05D000623 4.8e-11 71.6 104 40.4
BraA01t01016Z Brassica rapa HOM05D000828 ORTHO05D000623 4.8e-11 71.6 104 40.4
ClCG03G007610 Citrullus lanatus HOM05D000828 ORTHO05D000623 4.8e-11 71.6 90 44.4
THA.LOC104798429 Tarenaya hassleriana HOM05D000828 ORTHO05D000623 4.8e-11 71.6 113 41.6
TAR624G0843 Trochodendron aralioides HOM05D000828 ORTHO05D000623 4.8e-11 71.6 94 40.4
BcaC01g00557 Brassica carinata HOM05D000828 ORTHO05D000623 6.2e-11 71.2 109 39.4
BolC3t20410H Brassica oleracea HOM05D000828 ORTHO05D000623 6.2e-11 71.2 109 39.4
MBI06_g45399_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 8.1e-11 70.9 108 41.7
PSO407G0082 Papaver somniferum HOM05D000828 ORTHO05D000623 8.1e-11 70.9 86 45.3
Dinv18367 Davidia involucrata HOM05D000828 ORTHO05D000623 1.1e-10 70.5 86 44.2
PSO170G2808 Papaver somniferum HOM05D000828 ORTHO05D000623 1.1e-10 70.5 86 47.7
MBI06_g08610_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 1.4e-10 70.1 106 36.8
Nn1g04457 Nelumbo nucifera HOM05D000828 ORTHO05D000623 1.8e-10 69.7 101 42.6
PSO223G0079 Papaver somniferum HOM05D000828 ORTHO05D000623 1.8e-10 69.7 99 39.4
Thhalv10027258m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 3.1e-10 68.9 105 40.0
FAN16G2164 Fragaria x ananassa HOM05D000828 ORTHO05D000623 3.1e-10 68.9 92 44.6
PGR031G0760 Punica granatum HOM05D000828 ORTHO05D000623 3.1e-10 68.9 101 39.6
Gohir.D02G192300 Gossypium hirsutum HOM05D000828 ORTHO05D000623 4.0e-10 68.6 87 43.7
Gorai.005G215100 Gossypium raimondii HOM05D000828 ORTHO05D000623 4.0e-10 68.6 87 43.7
Gohir.A03G169100 Gossypium hirsutum HOM05D000828 ORTHO05D000623 5.3e-10 68.2 87 42.5
Eucgr.F03275 Eucalyptus grandis HOM05D000828 ORTHO05D000623 6.9e-10 67.8 90 45.6
Aqoxy1G02025 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 9.0e-10 67.4 86 40.7
Thecc.06G168700 Theobroma cacao HOM05D000828 ORTHO05D000623 9.0e-10 67.4 99 41.4
CDE03G0485 Ceratophyllum demersum HOM05D000044 ORTHO05D000623 1.2e-09 67.0 86 41.9
CsaV3_1G033270 Cucumis sativus L. HOM05D000828 ORTHO05D000623 1.2e-09 67.0 96 42.7
Thhalv10027005m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 1.2e-09 67.0 101 40.6
CARHR225550 Cardamine hirsuta HOM05D000828 ORTHO05D000623 1.5e-09 66.6 103 40.8
MELO3C002660.2 Cucumis melo HOM05D000828 ORTHO05D000623 1.5e-09 66.6 104 42.3
BcaNung02667 Brassica carinata HOM05D000828 ORTHO05D000623 2.6e-09 65.9 107 36.4
C07p49910 Brassica napus HOM05D000828 ORTHO05D000623 2.6e-09 65.9 107 36.4
BolC7t45493H Brassica oleracea HOM05D000828 ORTHO05D000623 2.6e-09 65.9 107 36.4
Aa31LG9G7230 Aethionema arabicum HOM05D000828 ORTHO05D000623 3.4e-09 65.5 100 38.0
BraA03t14231Z Brassica rapa HOM05D000828 ORTHO05D000623 3.4e-09 65.5 107 36.4
PSO724G0291 Papaver somniferum HOM05D000828 ORTHO05D000623 3.4e-09 65.5 86 41.9
PSO675G6029 Papaver somniferum HOM05D000828 ORTHO05D000623 4.5e-09 65.1 101 38.6
PSO724G1069 Papaver somniferum HOM05D000828 ORTHO05D000623 4.5e-09 65.1 101 39.6
AT5G45830 Arabidopsis thaliana HOM05D000828 ORTHO05D000623 7.6e-09 64.3 107 36.4
A03p51480 Brassica napus HOM05D000828 ORTHO05D000623 7.6e-09 64.3 82 39.0
Carub.0008s0213 Capsella rubella HOM05D000828 ORTHO05D000623 7.6e-09 64.3 107 37.4
COL.COLO4_31273 Corchorus olitorius HOM05D000828 ORTHO05D000623 7.6e-09 64.3 104 40.4
Carub.0007s2254 Capsella rubella HOM05D000828 ORTHO05D000623 9.9e-09 63.9 108 37.0
Thhalv10025925m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 9.9e-09 63.9 107 37.4
PSO675G4187 Papaver somniferum HOM05D000828 ORTHO05D000623 1.3e-08 63.5 101 35.6
BcaC06g31511 Brassica carinata HOM05D000828 ORTHO05D000623 1.7e-08 63.2 108 33.3
BcaC06g34393 Brassica carinata HOM05D000828 ORTHO05D000623 1.7e-08 63.2 108 32.4
C07p29120 Brassica napus HOM05D000828 ORTHO05D000623 1.7e-08 63.2 108 32.4
BolC7t43454H Brassica oleracea HOM05D000828 ORTHO05D000623 1.7e-08 63.2 108 32.4
PSO135G0104 Papaver somniferum HOM05D000828 ORTHO05D000623 1.7e-08 63.2 83 41.0
PSO386G0233 Papaver somniferum HOM05D000828 ORTHO05D000623 1.7e-08 63.2 99 36.4
AL7G35570 Arabidopsis lyrata HOM05D000828 ORTHO05D000623 2.2e-08 62.8 105 37.1
BraA06t27494Z Brassica rapa HOM05D000828 ORTHO05D000623 2.9e-08 62.4 108 31.5
BcaNung05500 Brassica carinata HOM05D000828 ORTHO05D000623 4.9e-08 61.6 84 38.1
A06p46330 Brassica napus HOM05D000828 ORTHO05D000623 4.9e-08 61.6 108 31.5
PSO541G1490 Papaver somniferum HOM05D000828 ORTHO05D000623 4.9e-08 61.6 101 39.6
PSO724G0379 Papaver somniferum HOM05D000828 ORTHO05D000623 6.4e-08 61.2 99 38.4
PSO782G4870 Papaver somniferum HOM05D000828 ORTHO05D000623 6.4e-08 61.2 86 38.4
Aa31LG6G1420 Aethionema arabicum HOM05D000828 ORTHO05D000623 8.4e-08 60.8 106 37.7
A09p21950 Brassica napus HOM05D000828 ORTHO05D000623 8.4e-08 60.8 108 34.3
ECA246G0755 Erigeron canadensis HOM05D000828 ORTHO05D000623 8.4e-08 60.8 101 33.7
PSO170G2137 Papaver somniferum HOM05D000828 ORTHO05D000623 8.4e-08 60.8 86 38.4
Zm00001eb152510 Zea mays HOM05D000828 ORTHO05D000623 8.4e-08 60.8 86 37.2
CDE10G0835 Ceratophyllum demersum HOM05D000160 ORTHO05D000914 1.1e-07 60.5 97 38.1
BraA09t37802Z Brassica rapa HOM05D000828 ORTHO05D000623 1.4e-07 60.1 108 33.3
BcaC04g21743 Brassica carinata HOM05D000828 ORTHO05D000623 2.4e-07 59.3 108 34.3
BolC9t55681H Brassica oleracea HOM05D000828 ORTHO05D000623 2.4e-07 59.3 108 34.3
COL.COLO4_31275 Corchorus olitorius HOM05D000828 ORTHO05D000623 2.4e-07 59.3 98 39.8
Lsat_1_v5_gn_9_99800 Lactuca sativa HOM05D000828 ORTHO05D000623 2.4e-07 59.3 89 33.7
BcaB07g30867 Brassica carinata HOM05D000828 ORTHO05D000623 4.2e-07 58.5 108 33.3
C09p28110 Brassica napus HOM05D000828 ORTHO05D000623 4.2e-07 58.5 108 34.3
HanXRQChr13g0389491 Helianthus annuus HOM05D000828 ORTHO05D000623 4.2e-07 58.5 94 33.0
AL8G12750 Arabidopsis lyrata HOM05D000828 ORTHO05D000623 5.5e-07 58.2 106 34.0
AT4G18680 Arabidopsis thaliana HOM05D000828 ORTHO05D000623 7.1e-07 57.8 84 39.3
Actinidia18801 Actinidia chinensis HOM05D000828 ORTHO05D000623 9.3e-07 57.4 86 36.0
Aqoxy1G04039 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 2.1e-06 56.2 86 39.5
Migut.M00704 Erythranthe guttata HOM05D000828 ORTHO05D000623 2.1e-06 56.2 95 36.8
Migut.M00720 Erythranthe guttata HOM05D000828 ORTHO05D000623 2.1e-06 56.2 102 34.3
PSO339G0646 Papaver somniferum HOM05D000828 ORTHO05D000623 2.1e-06 56.2 120 32.5
Thhalv10001138m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 2.7e-06 55.8 109 30.3
ECA240G0079 Erigeron canadensis HOM05D000828 ORTHO05D000623 3.5e-06 55.5 100 32.0
Sp2g10750 Schrenkiella parvula HOM05D000828 ORTHO05D000623 3.5e-06 55.5 90 32.2
A03p51470 Brassica napus HOM05D000828 ORTHO05D000623 4.6e-06 55.1 51 49.0
CARHR176140 Cardamine hirsuta HOM05D000828 ORTHO05D000623 4.6e-06 55.1 109 32.1
PSO782G4874 Papaver somniferum HOM05D000828 ORTHO05D000623 4.6e-06 55.1 91 36.3
Nitab4.5_0002177g0150 Nicotiana tabacum HOM05D000828 ORTHO05D000623 6.0e-06 54.7 71 42.3
PSO384G4507 Papaver somniferum HOM05D000828 ORTHO05D000623 6.0e-06 54.7 120 31.7
ECA248G0624 Erigeron canadensis HOM05D000828 ORTHO05D000623 7.9e-06 54.3 88 34.1


User provided reference genes

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