Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g070820.1 Solanum lycopersicum HOM05D024954 ORTHO05D006663 4.2e-56 221.1 108 100.0
Sopen02g019930 Solanum pennellii HOM05D024954 ORTHO05D018132 2.7e-55 218.4 108 99.1
PGSC0003DMG400008315 Solanum tuberosum HOM05D024954 ORTHO05D018132 4.6e-47 191.0 111 88.3
Nitab4.5_0001040g0170 Nicotiana tabacum HOM05D024954 ORTHO05D006663 1.2e-34 149.8 108 75.0
Nitab4.5_0001655g0230 Nicotiana tabacum HOM05D024954 ORTHO05D030261 2.0e-13 79.3 64 67.2
Cc09_g08880 Coffea canephora HOM05D006911 ORTHO05D006663 7.0e-11 70.9 58 63.8
Oeu052383.1 Olea europaea HOM05D006911 ORTHO05D006663 9.1e-11 70.5 58 63.8
Migut.M00927 Erythranthe guttata HOM05D006911 ORTHO05D006663 1.6e-10 69.7 57 61.4
SalBow6G3836 Salvia bowleyana HOM05D006911 ORTHO05D006663 5.9e-10 67.8 61 60.7
SalBow7G2931 Salvia bowleyana HOM05D006911 ORTHO05D006663 5.9e-10 67.8 61 60.7
CSS0032663 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 1.0e-09 67.0 57 61.4
PGSC0003DMG400030165 Solanum tuberosum HOM05D019164 ORTHO05D018132 1.7e-09 66.2 112 47.3
PGSC0003DMG400030163 Solanum tuberosum HOM05D019164 ORTHO05D018132 2.9e-09 65.5 112 48.2
PGSC0003DMG400030164 Solanum tuberosum HOM05D019164 ORTHO05D018132 1.5e-08 63.2 60 63.3
Sopen08g006500 Solanum pennellii HOM05D019164 ORTHO05D018132 3.2e-08 62.0 63 61.9
Gohir.D10G040100 Gossypium hirsutum HOM05D006911 ORTHO05D006663 4.2e-08 61.6 57 56.1
Gorai.011G042200 Gossypium raimondii HOM05D006911 ORTHO05D006663 4.2e-08 61.6 57 56.1
Hma1.2p1_0137F.1_g062460 Hydrangea macrophylla HOM05D006911 ORTHO05D006663 4.2e-08 61.6 57 63.2
Gohir.A10G039300 Gossypium hirsutum HOM05D006911 ORTHO05D006663 7.2e-08 60.8 57 56.1
Lsat_1_v5_gn_7_7541 Lactuca sativa HOM05D006911 ORTHO05D006663 7.2e-08 60.8 58 58.6
PGSC0003DMG400033317 Solanum tuberosum HOM05D019164 ORTHO05D018132 7.2e-08 60.8 115 40.0
Gohir.D06G205000 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.1e-07 59.3 63 54.0
Migut.H01374 Erythranthe guttata HOM05D006911 ORTHO05D006663 2.7e-07 58.9 107 39.3
ClCG03G007000 Citrullus lanatus HOM05D006911 ORTHO05D006663 3.6e-07 58.5 56 57.1
Gorai.010G239100 Gossypium raimondii HOM05D006911 ORTHO05D006663 4.7e-07 58.2 58 56.9
Nn4g26517 Nelumbo nucifera HOM05D006911 ORTHO05D006663 4.7e-07 58.2 57 61.4
COL.COLO4_24713 Corchorus olitorius HOM05D006911 ORTHO05D006663 8.0e-07 57.4 57 52.6
CiPaw.09G126200 Carya illinoinensis HOM05D006911 ORTHO05D006663 1.0e-06 57.0 66 51.5
Gohir.A06G197500 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.0e-06 57.0 63 54.0
QL05p059038 Quercus lobata HOM05D006911 ORTHO05D006663 1.0e-06 57.0 55 56.4
Nitab4.5_0008711g0020 Nicotiana tabacum HOM05D038268 ORTHO05D030261 1.4e-06 56.6 71 50.7
Thecc.06G153400 Theobroma cacao HOM05D006911 ORTHO05D006663 1.4e-06 56.6 57 54.4
Nn3g20669 Nelumbo nucifera HOM05D006911 ORTHO05D006663 2.3e-06 55.8 68 51.5
Gohir.D05G152400 Gossypium hirsutum HOM05D006911 ORTHO05D006663 5.2e-06 54.7 57 50.9
TWI09G0032 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 5.2e-06 54.7 57 50.9


User provided reference genes

Program Settings