Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g070380.1 Solanum lycopersicum HOM05D000011 ORTHO05D023192 5.6e-33 143.7 72 100.0
PGSC0003DMG400021098 Solanum tuberosum HOM05D000011 ORTHO05D000157 1.8e-26 122.1 64 95.3
CAN.G660.31 Capsicum annuum HOM05D000011 ORTHO05D023192 3.7e-24 114.4 64 87.5
TAR627G1195 Trochodendron aralioides HOM05D000011 ORTHO05D000157 2.5e-12 75.1 62 59.7
GSVIVG01007238001 Vitis vinifera HOM05D000011 ORTHO05D023192 1.6e-11 72.4 64 53.1
MBI15_g35681_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000157 1.8e-10 68.9 64 48.4
MBI15_g35679_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000157 5.1e-10 67.4 67 46.3
MBI15_g35682_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000157 1.1e-09 66.2 64 46.9
Duzib138G0602 Durio zibethinus HOM05D000011 ORTHO05D000018 2.0e-09 65.5 64 53.1
MBI15_g35680_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000157 7.4e-09 63.5 64 43.8
Thecc.04G103200 Theobroma cacao HOM05D000011 ORTHO05D000018 1.3e-08 62.8 64 50.0
TWI79G1339 Tripterygium wilfordii HOM05D000011 ORTHO05D000018 1.7e-08 62.4 64 48.4
FvH4_4g22940 Fragaria vesca HOM05D000011 ORTHO05D000018 3.7e-08 61.2 62 53.2
FAN12G1277 Fragaria x ananassa HOM05D000011 ORTHO05D000018 3.7e-08 61.2 62 53.2
Actinidia01990 Actinidia chinensis HOM05D000011 ORTHO05D000018 6.3e-08 60.5 64 42.2
MBI15_g25908_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 6.3e-08 60.5 62 46.8
COL.COLO4_08983 Corchorus olitorius HOM05D000011 ORTHO05D000018 8.2e-08 60.1 64 46.9
FAN17G3093 Fragaria x ananassa HOM05D000011 ORTHO05D000018 8.2e-08 60.1 62 51.6
FAN07G0136 Fragaria x ananassa HOM05D000011 ORTHO05D000018 1.8e-07 58.9 62 50.0
Actinidia32801 Actinidia chinensis HOM05D000011 ORTHO05D005387 2.4e-07 58.5 64 40.6
GSVIVG01024099001 Vitis vinifera HOM05D000011 ORTHO05D000018 2.4e-07 58.5 64 45.3
GSVIVG01024100001 Vitis vinifera HOM05D000011 ORTHO05D000018 2.4e-07 58.5 64 45.3
MBI15_g16381_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 3.1e-07 58.2 66 43.9
MBI15_g24991_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 3.1e-07 58.2 64 45.3
MBI15_g35994_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 3.1e-07 58.2 64 42.2
MBI15_g33663_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 4.1e-07 57.8 62 43.5
MBI15_g27555_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 5.3e-07 57.4 54 48.1
Haze_14399 Corylus avellana HOM05D000011 ORTHO05D000018 6.9e-07 57.0 64 42.2
MBI15_g15197_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 6.9e-07 57.0 64 42.2
MBI15_g25915_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 6.9e-07 57.0 64 42.2
MBI15_g33662_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 6.9e-07 57.0 64 43.8
PSO675G0198 Papaver somniferum HOM05D000011 ORTHO05D000157 6.9e-07 57.0 71 40.8
TAR376G1063 Trochodendron aralioides HOM05D000011 ORTHO05D000018 9.1e-07 56.6 64 45.3
Ciclev10017794m.g Citrus clementina HOM05D000011 ORTHO05D000018 1.2e-06 56.2 64 42.2
MBI15_g37108_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 1.2e-06 56.2 64 39.1
MBI15_g37120_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 1.2e-06 56.2 64 43.8
MD17G1267900 Malus domestica HOM05D000002 ORTHO05D000001 1.2e-06 56.2 62 48.4
QL05p061062 Quercus lobata HOM05D000011 ORTHO05D000018 1.2e-06 56.2 64 43.8
QL05p061342 Quercus lobata HOM05D000011 ORTHO05D000018 1.2e-06 56.2 64 45.3
TAR629G1898 Trochodendron aralioides HOM05D000011 ORTHO05D000157 1.2e-06 56.2 64 40.6
ATR1149G043 Amborella trichopoda HOM05D000011 ORTHO05D005387 1.5e-06 55.8 64 40.6
Potri.018G138500 Populus trichocarpa HOM05D000011 ORTHO05D000018 1.5e-06 55.8 71 43.7
Actinidia17475 Actinidia chinensis HOM05D000011 ORTHO05D000018 2.0e-06 55.5 64 37.5
MBI15_g25907_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 2.0e-06 55.5 63 41.3
MD04G1238000 Malus domestica HOM05D000011 ORTHO05D000018 2.0e-06 55.5 64 42.2
Actinidia01989 Actinidia chinensis HOM05D000011 ORTHO05D000018 2.6e-06 55.1 64 37.5
DCAR_017046 Daucus carota HOM05D000011 ORTHO05D000018 2.6e-06 55.1 64 45.3
QL11p047012 Quercus lobata HOM05D000011 ORTHO05D000018 2.6e-06 55.1 64 45.3
QL11p047044 Quercus lobata HOM05D000011 ORTHO05D000018 2.6e-06 55.1 64 45.3
ATR0751G173 Amborella trichopoda HOM05D000011 ORTHO05D000157 3.4e-06 54.7 64 40.6
CSS0029059 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000157 3.4e-06 54.7 64 43.8
Cfa023504 Carpinus fangiana HOM05D000011 ORTHO05D000018 3.4e-06 54.7 64 40.6
DCAR_025329 Daucus carota HOM05D000011 ORTHO05D000018 3.4e-06 54.7 64 43.8
Hma1.2p1_0803F.1_g220740 Hydrangea macrophylla HOM05D000011 ORTHO05D000157 3.4e-06 54.7 64 43.8
Lj1g0009587 Lotus japonicus HOM05D000011 ORTHO05D000018 3.4e-06 54.7 67 37.3
Nn7g36881 Nelumbo nucifera HOM05D000011 ORTHO05D000157 3.4e-06 54.7 64 39.1
PGSC0003DMG400011523 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.4e-06 54.7 64 40.6
Actinidia01991 Actinidia chinensis HOM05D000011 ORTHO05D000018 4.5e-06 54.3 64 37.5
Cc03_g06300 Coffea canephora HOM05D000011 ORTHO05D000018 4.5e-06 54.3 64 40.6
Migut.F02044 Erythranthe guttata HOM05D000011 ORTHO05D006231 4.5e-06 54.3 64 34.4
Nn1g09266 Nelumbo nucifera HOM05D000011 ORTHO05D000157 4.5e-06 54.3 64 42.2
DCAR_025331 Daucus carota HOM05D000011 ORTHO05D000018 5.9e-06 53.9 64 43.8
Dinv27079 Davidia involucrata HOM05D000011 ORTHO05D000018 5.9e-06 53.9 64 43.8
CiPaw.04G053100 Carya illinoinensis HOM05D000011 ORTHO05D000018 7.7e-06 53.5 64 43.8
Dinv27099 Davidia involucrata HOM05D000011 ORTHO05D000018 7.7e-06 53.5 64 43.8
Gohir.D11G165000 Gossypium hirsutum HOM05D000011 ORTHO05D000018 7.7e-06 53.5 64 43.8
Gorai.007G175800 Gossypium raimondii HOM05D000011 ORTHO05D000018 7.7e-06 53.5 64 43.8
Sabra18G0113600 Salix brachista HOM05D000011 ORTHO05D000018 7.7e-06 53.5 71 42.3
PGSC0003DMG400011521 Solanum tuberosum HOM05D000011 ORTHO05D000018 7.7e-06 53.5 64 42.2
GSVIVG01032825001 Vitis vinifera HOM05D000011 ORTHO05D000018 7.7e-06 53.5 64 46.9


User provided reference genes

Program Settings