Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 6.1e-91 337.4 166 100.0
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 4.4e-81 304.7 166 89.2
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 7.0e-79 297.4 166 87.3
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.2e-78 296.6 166 87.3
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 5.8e-57 224.6 155 67.7
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 6.2e-51 204.5 164 67.1
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 8.1e-51 204.1 156 62.2
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 1.1e-50 203.8 141 66.7
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 4.0e-50 201.8 150 65.3
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 4.0e-50 201.8 159 63.5
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 6.9e-50 201.1 154 59.1
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 9.9e-49 197.2 174 58.6
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 1.3e-48 196.8 161 59.6
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.9e-48 195.7 156 59.6
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 6.4e-48 194.5 161 60.2
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 1.1e-47 193.7 156 60.3
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 1.1e-47 193.7 155 60.0
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 3.2e-47 192.2 152 57.9
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 3.2e-47 192.2 150 60.0
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 3.2e-47 192.2 155 59.4
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 3.2e-47 192.2 157 60.5
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 3.2e-47 192.2 151 63.6
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 5.4e-47 191.4 140 62.9
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 5.4e-47 191.4 160 58.1
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 9.3e-47 190.7 154 57.1
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 9.3e-47 190.7 161 59.6
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 1.2e-46 190.3 142 66.2
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.2e-46 190.3 161 59.0
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.6e-46 189.9 161 57.1
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.6e-46 189.9 146 61.0
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 4.6e-46 188.3 154 55.2
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 4.6e-46 188.3 156 56.4
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 4.6e-46 188.3 138 61.6
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 6.0e-46 188.0 128 67.2
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 7.8e-46 187.6 154 56.5
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 7.8e-46 187.6 145 62.8
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 1.3e-45 186.8 157 59.2
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 2.3e-45 186.0 155 56.8
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 3.0e-45 185.7 155 56.8
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 3.0e-45 185.7 140 60.7
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 3.9e-45 185.3 155 56.8
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 3.9e-45 185.3 154 56.5
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 3.9e-45 185.3 167 56.3
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 5.1e-45 184.9 135 61.5
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 6.6e-45 184.5 155 56.1
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 6.6e-45 184.5 155 56.1
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 8.7e-45 184.1 137 61.3
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.1e-44 183.7 143 62.2
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 1.1e-44 183.7 136 62.5
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 2.5e-44 182.6 155 56.1
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 3.3e-44 182.2 154 58.4
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 3.3e-44 182.2 151 57.0
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 3.3e-44 182.2 136 61.8
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 3.3e-44 182.2 136 61.8
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 5.6e-44 181.4 155 56.1
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 7.3e-44 181.0 129 64.3
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 7.3e-44 181.0 140 58.6
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 9.6e-44 180.6 152 55.3
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 1.6e-43 179.9 143 61.5
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 2.1e-43 179.5 137 60.6
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 2.1e-43 179.5 139 58.3
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 2.8e-43 179.1 150 57.3
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 2.8e-43 179.1 154 53.9
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 3.6e-43 178.7 151 57.0
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 4.8e-43 178.3 141 58.2
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 6.2e-43 177.9 159 56.0
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 6.2e-43 177.9 159 56.0
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 8.1e-43 177.6 142 61.3
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.1e-42 177.2 139 59.7
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.4e-42 176.8 160 57.5
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 1.8e-42 176.4 137 60.6
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 4.0e-42 175.3 161 53.4
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 6.9e-42 174.5 161 55.3
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 6.9e-42 174.5 136 60.3
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 6.9e-42 174.5 137 59.9
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 1.5e-41 173.3 135 61.5
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 4.5e-41 171.8 144 60.4
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 4.5e-41 171.8 158 52.5
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 9.9e-41 170.6 135 60.7
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 4.9e-40 168.3 143 55.2
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 4.9e-40 168.3 160 50.0
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 1.9e-39 166.4 134 56.7
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 3.2e-39 165.6 134 57.5
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 5.4e-39 164.9 161 54.0
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 9.3e-39 164.1 148 52.7
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 1.6e-38 163.3 136 56.6
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 1.6e-38 163.3 156 49.4
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 2.1e-38 162.9 127 56.7
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 6.0e-38 161.4 158 50.0
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 1.8e-37 159.8 141 48.9
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 1.8e-37 159.8 141 48.9
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 3.0e-37 159.1 141 56.7
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 6.7e-37 157.9 136 58.1
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 2.1e-35 152.9 165 49.1
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 1.2e-33 147.1 138 50.0
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 1.2e-33 147.1 134 52.2
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 2.0e-33 146.4 74 98.6
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 7.9e-30 134.4 158 44.9
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 7.9e-30 134.4 103 60.2
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.0e-29 134.0 107 58.9
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 7.4e-28 127.9 113 53.1
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 7.4e-28 127.9 91 67.0
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.2e-25 120.6 83 62.7
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 1.5e-25 120.2 161 38.5
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 2.5e-23 112.8 124 40.3
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.2e-22 110.5 79 63.3
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 3.3e-20 102.4 219 32.4
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 5.7e-20 101.7 64 68.8
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 2.8e-19 99.4 144 34.0
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 6.3e-19 98.2 147 36.7
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 1.8e-13 80.1 149 32.2
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 2.2e-11 73.2 133 32.3
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 3.7e-11 72.4 109 38.5
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.8e-10 70.1 106 37.7
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 3.4e-09 65.9 73 42.5
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 1.0e-08 64.3 126 33.3
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 1.3e-08 63.9 60 45.0
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 2.5e-07 59.7 134 29.1
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 2.7e-06 56.2 47 59.6


User provided reference genes

Program Settings