Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 3.8e-108 394.8 193 100.0
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 2.5e-96 355.5 179 93.9
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 3.3e-96 355.1 181 95.6
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 2.5e-83 312.4 184 84.2
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.1e-78 297.0 183 78.1
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 7.4e-72 274.2 207 68.6
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 5.5e-67 258.1 180 70.0
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 2.2e-63 246.1 180 67.2
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 1.1e-62 243.8 185 65.4
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 1.4e-62 243.4 180 67.8
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 4.1e-62 241.9 176 69.9
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 7.7e-61 237.7 195 62.6
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 1.3e-60 236.9 183 65.6
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 3.8e-60 235.3 154 72.1
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 4.2e-59 231.9 138 79.0
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 2.7e-58 229.2 138 76.8
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 8.0e-58 227.6 178 66.9
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 3.9e-57 225.3 163 69.9
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 6.7e-57 224.6 186 61.3
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 1.1e-56 223.8 172 65.7
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.5e-56 223.4 173 64.7
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 2.6e-56 222.6 173 64.2
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 4.4e-56 221.9 157 69.4
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 4.4e-56 221.9 176 63.6
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 5.7e-56 221.5 139 73.4
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 1.3e-55 220.3 138 73.9
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 2.8e-55 219.2 169 63.3
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 4.8e-55 218.4 129 78.3
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 4.8e-55 218.4 176 61.9
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 4.8e-55 218.4 173 62.4
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 6.3e-55 218.0 112 88.4
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 8.2e-55 217.6 179 63.1
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 8.2e-55 217.6 172 64.5
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 8.2e-55 217.6 156 67.9
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 1.1e-54 217.2 166 63.3
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.1e-54 217.2 134 77.6
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 1.4e-54 216.9 166 63.3
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 1.8e-54 216.5 177 61.6
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 1.8e-54 216.5 166 63.3
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 2.4e-54 216.1 166 62.7
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 2.4e-54 216.1 175 63.4
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 7.0e-54 214.5 166 62.7
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.2e-53 213.8 130 76.2
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 2.0e-53 213.0 166 62.7
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 2.0e-53 213.0 140 75.0
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 2.6e-53 212.6 166 62.7
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 2.6e-53 212.6 180 56.7
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 2.6e-53 212.6 138 73.9
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.6e-53 212.6 143 72.7
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 2.6e-53 212.6 171 62.6
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 4.5e-53 211.8 146 70.5
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.7e-52 209.9 130 75.4
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.7e-52 209.9 136 70.6
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 3.8e-52 208.8 131 73.3
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 3.8e-52 208.8 143 71.3
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 5.0e-52 208.4 129 74.4
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.5e-51 206.8 133 70.7
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 1.5e-51 206.8 133 70.7
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 2.5e-51 206.1 135 71.9
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 3.2e-51 205.7 233 50.6
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 4.2e-51 205.3 158 62.7
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 5.5e-51 204.9 133 69.9
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 5.5e-51 204.9 151 64.2
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 7.2e-51 204.5 135 70.4
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 7.2e-51 204.5 133 70.7
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 9.4e-51 204.1 160 63.1
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 1.2e-50 203.8 150 64.0
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 1.2e-50 203.8 133 72.2
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.2e-50 203.8 149 66.4
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 1.2e-50 203.8 133 71.4
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 2.7e-50 202.6 137 67.9
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 3.6e-50 202.2 175 60.6
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 8.0e-50 201.1 179 57.5
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 8.0e-50 201.1 117 81.2
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 8.0e-50 201.1 166 59.6
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 2.0e-48 196.4 105 84.8
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 7.5e-48 194.5 138 63.0
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 3.7e-47 192.2 136 66.2
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 3.7e-47 192.2 130 67.7
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 1.6e-45 186.8 129 68.2
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 3.5e-45 185.7 107 76.6
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 5.9e-45 184.9 136 59.6
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.7e-44 183.3 145 62.1
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 1.5e-43 180.3 107 73.8
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 5.5e-43 178.3 160 56.9
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 1.6e-42 176.8 102 72.5
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 5.7e-40 168.3 104 70.2
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 1.1e-38 164.1 108 68.5
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 7.0e-38 161.4 116 61.2
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 7.2e-35 151.4 135 51.9
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 1.2e-34 150.6 106 61.3
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 3.6e-34 149.1 91 69.2
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 2.0e-32 143.3 142 48.6
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 4.4e-32 142.1 91 64.8
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.7e-31 140.2 151 49.7
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 2.0e-29 133.3 135 50.4
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 1.5e-27 127.1 134 50.7
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 2.5e-27 126.3 138 49.3
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 2.5e-27 126.3 136 47.8
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 8.0e-26 121.3 89 55.1
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 6.8e-25 118.2 89 51.7
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 2.6e-24 116.3 59 84.7
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 2.6e-24 116.3 68 73.5
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 4.4e-24 115.5 78 69.2
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 5.2e-17 92.0 87 44.8
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 3.9e-12 75.9 73 53.4
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 5.4e-06 55.5 42 52.4
Sopen02g018050 Solanum pennellii HOM05D012543 ORTHO05D014563 7.1e-06 55.1 51 62.7


User provided reference genes

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