Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g068615.1 Solanum lycopersicum HOM05D000097 ORTHO05D000041 1.1e-66 256.5 134 100.0
Sopen02g017780 Solanum pennellii HOM05D000097 ORTHO05D000041 6.6e-19 97.8 116 55.2
Nitab4.5_0006282g0030 Nicotiana tabacum HOM05D000097 ORTHO05D000041 2.9e-14 82.4 142 45.1
PGSC0003DMG400010443 Solanum tuberosum HOM05D000097 ORTHO05D000041 1.8e-08 63.2 83 49.4
PGSC0003DMG400010430 Solanum tuberosum HOM05D000097 ORTHO05D000041 3.1e-08 62.4 36 94.4
PGSC0003DMG400010444 Solanum tuberosum HOM05D000097 ORTHO05D000041 4.0e-08 62.0 36 91.7
Nitab4.5_0000443g0020 Nicotiana tabacum HOM05D000097 ORTHO05D000041 5.2e-08 61.6 37 91.9
Sopen02g017770 Solanum pennellii HOM05D000097 ORTHO05D000041 8.9e-08 60.8 36 91.7
PGSC0003DMG400025655 Solanum tuberosum HOM05D000097 ORTHO05D000041 8.9e-08 60.8 36 91.7
Nitab4.5_0002542g0020 Nicotiana tabacum HOM05D000097 ORTHO05D000041 2.6e-07 59.3 37 86.5
Solyc02g068600.3 Solanum lycopersicum HOM05D000097 ORTHO05D000041 3.4e-07 58.9 36 88.9
BraA09t37742Z Brassica rapa HOM05D000097 ORTHO05D000041 1.7e-06 56.6 50 58.0
QL11p015452 Quercus lobata HOM05D000097 ORTHO05D000041 1.7e-06 56.6 37 81.1
QL11p015610 Quercus lobata HOM05D000097 ORTHO05D000041 1.7e-06 56.6 37 81.1
BcaC04g21811 Brassica carinata HOM05D000097 ORTHO05D000041 2.2e-06 56.2 37 75.7
A09p21410 Brassica napus HOM05D000097 ORTHO05D000041 2.2e-06 56.2 37 75.7
C09p27240 Brassica napus HOM05D000097 ORTHO05D000041 2.2e-06 56.2 37 75.7
CAN.G149.24 Capsicum annuum HOM05D000097 ORTHO05D000041 2.2e-06 56.2 43 65.1
Hma1.2p1_1777F.1_g302000 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.2e-06 56.2 37 75.7
Nitab4.5_0000791g0010 Nicotiana tabacum HOM05D000097 ORTHO05D000041 2.9e-06 55.8 37 83.8
Ah.09g235280 Amaranthus hybridus HOM05D000097 ORTHO05D000041 3.8e-06 55.5 52 59.6
Ah.09g235320 Amaranthus hybridus HOM05D000097 ORTHO05D000041 4.9e-06 55.1 53 54.7
Dinv09054 Davidia involucrata HOM05D000097 ORTHO05D000041 4.9e-06 55.1 37 75.7
Oeu012359.1 Olea europaea HOM05D000097 ORTHO05D000041 4.9e-06 55.1 37 78.4
Oeu052663.1 Olea europaea HOM05D000097 ORTHO05D000041 4.9e-06 55.1 43 72.1
PSO782G3422 Papaver somniferum HOM05D000097 ORTHO05D000041 4.9e-06 55.1 40 70.0
Ah.09g235310 Amaranthus hybridus HOM05D000097 ORTHO05D000041 6.4e-06 54.7 123 37.4
CARHR177980 Cardamine hirsuta HOM05D000097 ORTHO05D000041 6.4e-06 54.7 37 73.0
Ciclev10003198m.g Citrus clementina HOM05D000097 ORTHO05D000041 6.4e-06 54.7 40 70.0
Ciclev10003264m.g Citrus clementina HOM05D000097 ORTHO05D000041 6.4e-06 54.7 40 65.0
Ciclev10003521m.g Citrus clementina HOM05D000097 ORTHO05D000041 6.4e-06 54.7 40 70.0
Ciclev10003926m.g Citrus clementina HOM05D000097 ORTHO05D000041 6.4e-06 54.7 40 70.0
Oeu042520.1 Olea europaea HOM05D000097 ORTHO05D000041 6.4e-06 54.7 37 75.7
PSO210G2908 Papaver somniferum HOM05D000097 ORTHO05D000041 6.4e-06 54.7 40 67.5
PSO675G6057 Papaver somniferum HOM05D000097 ORTHO05D000041 6.4e-06 54.7 40 67.5
vmacro04304 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 6.4e-06 54.7 37 70.3
Ciclev10025100m.g Citrus clementina HOM05D000097 ORTHO05D000041 8.4e-06 54.3 37 67.6
MELO3C002418.2 Cucumis melo HOM05D000097 ORTHO05D000041 8.4e-06 54.3 38 78.9
CsaV3_1G010280 Cucumis sativus L. HOM05D000097 ORTHO05D000041 8.4e-06 54.3 38 78.9
Glyma.09G054900 Glycine max HOM05D000097 ORTHO05D000041 8.4e-06 54.3 39 66.7
Oeu038852.2 Olea europaea HOM05D000097 ORTHO05D000041 8.4e-06 54.3 37 75.7
Oeu060646.3 Olea europaea HOM05D000097 ORTHO05D000041 8.4e-06 54.3 40 67.5
QL11p015433 Quercus lobata HOM05D000097 ORTHO05D000041 8.4e-06 54.3 37 78.4
QL11p015595 Quercus lobata HOM05D000097 ORTHO05D000041 8.4e-06 54.3 43 69.8
VMungo1309G0050 Vigna mungo HOM05D000097 ORTHO05D000041 8.4e-06 54.3 39 69.2


User provided reference genes

Program Settings