Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 1.1e-98 363.2 175 100.0
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 4.3e-95 351.3 171 98.2
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 3.7e-94 348.2 171 97.7
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 4.3e-79 298.1 171 83.6
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 9.1e-77 290.4 171 81.9
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 3.4e-76 288.5 172 81.4
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 6.7e-72 274.2 171 75.4
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 3.8e-51 205.3 175 60.6
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 5.0e-51 204.9 171 62.0
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 1.2e-49 200.3 150 66.7
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 8.8e-48 194.1 151 63.6
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 1.2e-47 193.7 156 60.3
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 2.2e-46 189.5 170 59.4
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 3.7e-46 188.7 151 59.6
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 1.4e-45 186.8 179 57.0
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 2.7e-44 182.6 162 55.6
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 3.5e-44 182.2 168 54.2
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 2.3e-43 179.5 164 56.7
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 7.2e-42 174.5 161 55.3
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 9.5e-42 174.1 153 55.6
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 4.7e-41 171.8 171 50.9
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 7.5e-39 164.5 172 52.9
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 9.8e-39 164.1 152 52.0
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 4.1e-37 158.7 174 50.6
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 2.7e-36 156.0 174 49.4
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 3.5e-36 155.6 165 51.5
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 5.9e-36 154.8 149 52.3
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 7.8e-36 154.5 169 50.3
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 1.0e-35 154.1 149 51.7
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 1.3e-35 153.7 161 51.6
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 1.3e-35 153.7 149 49.0
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 2.3e-35 152.9 169 44.4
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 2.9e-35 152.5 163 49.1
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 3.9e-35 152.1 167 49.7
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 8.6e-35 151.0 156 48.1
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 2.5e-34 149.4 150 52.0
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 5.6e-34 148.3 150 54.0
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 9.5e-34 147.5 177 51.4
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 1.2e-33 147.1 155 49.0
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.6e-33 146.7 150 51.3
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 2.1e-33 146.4 148 52.7
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 8.0e-33 144.4 167 47.3
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 8.0e-33 144.4 158 49.4
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 2.3e-32 142.9 148 51.4
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 4.0e-32 142.1 169 45.6
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 5.2e-32 141.7 149 48.3
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.5e-31 140.2 166 45.8
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 2.0e-31 139.8 149 49.7
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 3.4e-31 139.0 149 49.0
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 4.4e-31 138.7 165 42.4
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 5.8e-31 138.3 149 47.7
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 9.8e-31 137.5 149 47.7
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 3.7e-30 135.6 149 48.3
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 6.4e-30 134.8 165 49.1
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 1.1e-29 134.0 158 46.8
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.1e-29 134.0 149 47.7
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.0e-28 129.8 149 47.0
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 1.0e-27 127.5 158 46.8
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 1.7e-27 126.7 150 48.0
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 3.0e-27 125.9 165 42.4
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 3.3e-26 122.5 165 41.8
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 2.8e-25 119.4 151 47.0
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 2.3e-24 116.3 155 44.5
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.5e-18 97.1 121 44.6
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 5.6e-18 95.1 151 37.1
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 3.7e-14 82.4 106 45.3
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 3.8e-06 55.8 55 49.1
FAN26G1226 Fragaria x ananassa HOM05D008006 ORTHO05D010181 6.4e-06 55.1 88 36.4


User provided reference genes

Program Settings