Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 4.7e-74 281.2 148 100.0
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 1.8e-73 279.3 148 99.3
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 2.5e-67 258.8 148 92.6
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 7.7e-61 237.3 148 86.5
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 7.7e-61 237.3 148 85.8
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 6.1e-50 201.1 144 76.4
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 4.0e-49 198.4 148 73.6
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 6.6e-36 154.5 146 60.3
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 8.6e-36 154.1 148 60.8
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 4.3e-35 151.8 145 60.0
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 1.2e-34 150.2 150 59.3
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 6.8e-33 144.4 151 58.3
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 2.6e-32 142.5 149 56.4
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 3.4e-32 142.1 151 57.6
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 2.2e-31 139.4 139 58.3
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 4.9e-31 138.3 140 57.9
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 8.3e-31 137.5 146 56.8
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 1.4e-30 136.7 147 56.5
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 2.4e-30 136.0 146 56.2
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 7.0e-30 134.4 140 55.7
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 1.7e-28 129.8 144 55.6
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 3.0e-28 129.0 149 51.0
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 5.0e-28 128.3 145 54.5
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 2.5e-27 125.9 148 56.1
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 2.5e-27 125.9 113 59.3
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 7.3e-27 124.4 137 48.9
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 7.3e-27 124.4 137 48.9
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 1.2e-26 123.6 149 54.4
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 2.1e-26 122.9 146 52.1
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 2.8e-26 122.5 148 50.7
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 6.2e-26 121.3 143 54.5
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 8.0e-26 120.9 149 50.3
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 8.0e-26 120.9 140 48.6
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.1e-25 120.6 147 51.0
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.8e-25 119.8 140 47.9
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 3.1e-25 119.0 147 51.0
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 3.1e-25 119.0 149 51.0
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 6.8e-25 117.9 147 49.7
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 6.8e-25 117.9 132 50.8
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 5.8e-24 114.8 144 50.0
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 7.5e-24 114.4 144 50.0
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 7.5e-24 114.4 134 52.2
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 9.8e-24 114.0 144 49.3
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 1.7e-23 113.2 149 47.7
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 1.7e-23 113.2 137 52.6
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 4.9e-23 111.7 144 51.4
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 6.4e-23 111.3 116 54.3
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 8.3e-23 110.9 145 50.3
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 2.4e-22 109.4 125 52.8
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.2e-22 109.0 137 46.0
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 3.2e-22 109.0 137 45.3
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 3.2e-22 109.0 133 45.9
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 4.1e-22 108.6 143 49.0
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 4.1e-22 108.6 145 49.7
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 5.4e-22 108.2 133 48.1
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 7.0e-22 107.8 145 48.3
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 9.2e-22 107.5 126 49.2
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.6e-21 106.7 137 46.7
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.6e-21 106.7 137 46.7
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 2.1e-21 106.3 143 50.3
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 3.5e-21 105.5 125 52.0
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 4.6e-21 105.1 137 46.0
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 4.6e-21 105.1 90 63.3
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 7.8e-21 104.4 142 46.5
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 1.0e-20 104.0 127 49.6
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 5.1e-20 101.7 144 47.2
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.1e-19 100.5 145 46.9
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 1.9e-19 99.8 136 48.5
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 4.3e-19 98.6 70 65.7
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 7.3e-19 97.8 137 43.1
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 2.1e-18 96.3 139 48.2
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 2.1e-18 96.3 143 46.2
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.1e-17 94.0 145 44.1
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 3.1e-17 92.4 143 43.4
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 4.0e-17 92.0 145 44.1
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 1.2e-16 90.5 138 41.3
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 2.0e-16 89.7 97 51.5
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 9.9e-16 87.4 141 44.0
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 1.3e-15 87.0 134 42.5
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 2.2e-15 86.3 144 42.4
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 2.9e-15 85.9 135 43.0
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 2.9e-15 85.9 129 45.7
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 3.2e-14 82.4 146 42.5
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 9.2e-14 80.9 96 46.9
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 2.1e-13 79.7 146 41.1
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 3.5e-13 79.0 140 40.7
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 4.6e-13 78.6 98 50.0
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 6.0e-13 78.2 137 43.1
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 1.0e-12 77.4 144 41.0
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.7e-12 76.6 95 47.4
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 3.0e-12 75.9 119 43.7
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 3.9e-12 75.5 147 36.7
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 1.5e-11 73.6 127 39.4
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 1.9e-11 73.2 140 42.1
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 5.6e-11 71.6 143 41.3
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.4e-09 67.0 102 48.0
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 1.8e-09 66.6 149 37.6
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 5.2e-09 65.1 107 43.0
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 1.5e-08 63.5 109 41.3
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 2.6e-08 62.8 50 68.0
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 5.8e-08 61.6 100 44.0
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 9.9e-08 60.8 144 32.6
AUR62036260 Chenopodium quinoa HOM05D006398 ORTHO05D007983 2.2e-07 59.7 143 31.5
AUR62039711 Chenopodium quinoa HOM05D006398 ORTHO05D007983 2.9e-07 59.3 143 32.2
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 2.9e-07 59.3 66 54.5
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 3.8e-07 58.9 72 51.4
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 8.4e-07 57.8 122 39.3
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 1.1e-06 57.4 117 34.2
BcaNung00381 Brassica carinata HOM05D006398 ORTHO05D007983 1.4e-06 57.0 94 42.6
A01p23410 Brassica napus HOM05D006398 ORTHO05D007983 3.2e-06 55.8 107 37.4
BraA01t02248Z Brassica rapa HOM05D006398 ORTHO05D007983 3.2e-06 55.8 107 37.4


User provided reference genes

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