Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 1.3e-49 199.5 108 100.0
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 1.9e-45 185.7 108 93.5
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 1.9e-45 185.7 108 93.5
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 5.3e-19 97.8 90 65.6
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 1.0e-17 93.6 102 57.8
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 5.0e-17 91.3 102 57.8
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 8.5e-17 90.5 94 57.4
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.4e-16 89.7 101 53.5
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 3.2e-16 88.6 87 60.9
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.2e-15 86.7 76 63.2
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 8.0e-15 84.0 109 48.6
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 9.7e-13 77.0 108 47.2
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 2.2e-12 75.9 120 44.2
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 2.8e-12 75.5 97 50.5
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 4.8e-12 74.7 109 45.0
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 6.3e-12 74.3 109 45.0
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.8e-11 72.8 49 65.3
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.4e-11 72.4 106 45.3
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 9.1e-11 70.5 105 41.0
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 1.6e-10 69.7 89 46.1
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 2.0e-10 69.3 106 45.3
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 2.6e-10 68.9 65 55.4
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 4.5e-10 68.2 59 57.6
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 5.9e-10 67.8 54 59.3
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 5.9e-10 67.8 109 40.4
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 7.7e-10 67.4 102 43.1
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 7.7e-10 67.4 89 47.2
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 1.7e-09 66.2 80 47.5
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 2.2e-09 65.9 64 54.7
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 2.2e-09 65.9 99 42.4
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 2.9e-09 65.5 65 53.8
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 3.8e-09 65.1 101 46.5
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 5.0e-09 64.7 95 45.3
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 5.0e-09 64.7 54 63.0
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 6.5e-09 64.3 59 52.5
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 6.5e-09 64.3 91 44.0
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 8.5e-09 63.9 50 60.0
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 8.5e-09 63.9 47 63.8
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.5e-08 63.2 100 42.0
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 1.9e-08 62.8 55 52.7
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.9e-08 62.8 93 46.2
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 1.9e-08 62.8 101 43.6
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 2.5e-08 62.4 92 41.3
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 2.5e-08 62.4 102 40.2
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 7.2e-08 60.8 110 37.3
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 9.4e-08 60.5 88 42.0
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 1.2e-07 60.1 89 46.1
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 1.6e-07 59.7 97 38.1
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 1.6e-07 59.7 99 43.4
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 2.1e-07 59.3 105 42.9
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 2.1e-07 59.3 65 50.8
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 2.7e-07 58.9 103 42.7
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 3.6e-07 58.5 102 43.1
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 4.7e-07 58.2 69 49.3
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 4.7e-07 58.2 105 37.1
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 6.1e-07 57.8 106 37.7
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 1.0e-06 57.0 103 36.9
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 1.0e-06 57.0 103 40.8
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.0e-06 57.0 102 39.2
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 1.4e-06 56.6 109 37.6
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 1.4e-06 56.6 39 71.8
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 1.8e-06 56.2 105 39.0
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 1.8e-06 56.2 103 40.8
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 2.3e-06 55.8 86 43.0
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 3.0e-06 55.5 63 54.0
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 4.0e-06 55.1 105 39.0
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 4.0e-06 55.1 100 40.0
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 4.0e-06 55.1 64 53.1
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 5.2e-06 54.7 96 39.6
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 6.7e-06 54.3 105 38.1
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 6.7e-06 54.3 105 38.1
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 6.7e-06 54.3 105 38.1
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 6.7e-06 54.3 96 39.6
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 6.7e-06 54.3 96 39.6
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 6.7e-06 54.3 96 39.6
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 8.8e-06 53.9 102 41.2


User provided reference genes

Program Settings