Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 5.9e-88 327.4 155 100.0
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 6.1e-85 317.4 155 96.8
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 1.4e-81 306.2 153 92.8
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 2.2e-74 282.3 152 86.8
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.4e-60 236.5 153 73.2
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.3e-58 229.9 168 66.7
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 3.7e-58 228.4 147 74.8
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 1.1e-41 173.7 161 55.9
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 1.7e-39 166.4 96 78.1
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 6.6e-39 164.5 99 76.8
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 1.5e-38 163.3 111 72.1
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 7.3e-38 161.0 154 55.2
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 2.1e-37 159.5 96 77.1
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 4.0e-36 155.2 155 56.1
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 1.2e-35 153.7 114 64.9
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 1.5e-35 153.3 96 77.1
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 1.5e-35 153.3 138 57.2
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.5e-35 153.3 94 75.5
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.5e-35 153.3 94 75.5
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 2.6e-35 152.5 139 56.8
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 5.8e-35 151.4 96 68.8
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 7.6e-35 151.0 138 56.5
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 1.3e-34 150.2 98 71.4
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 2.2e-34 149.4 110 67.3
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 2.9e-34 149.1 110 65.5
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 3.8e-34 148.7 96 69.8
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 6.4e-34 147.9 119 62.2
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 8.4e-34 147.5 91 74.7
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 1.1e-33 147.1 95 69.5
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 1.1e-33 147.1 99 67.7
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 1.4e-33 146.7 90 77.8
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 1.9e-33 146.4 92 69.6
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 3.2e-33 145.6 97 71.1
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 3.2e-33 145.6 97 71.1
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 3.2e-33 145.6 97 71.1
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 4.2e-33 145.2 110 64.5
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.4e-33 144.8 141 53.9
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 7.1e-33 144.4 92 71.7
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 1.6e-32 143.3 133 54.1
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 1.6e-32 143.3 156 48.7
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.6e-32 143.3 110 63.6
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 2.1e-32 142.9 147 47.6
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.1e-32 142.9 110 63.6
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.1e-32 142.9 110 63.6
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 2.7e-32 142.5 95 67.4
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 3.5e-32 142.1 136 53.7
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 4.6e-32 141.7 95 70.5
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 4.6e-32 141.7 115 57.4
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 6.0e-32 141.4 124 56.5
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 6.0e-32 141.4 95 67.4
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 1.0e-31 140.6 95 66.3
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 1.0e-31 140.6 142 54.2
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 2.3e-31 139.4 110 58.2
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 2.3e-31 139.4 115 58.3
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 3.0e-31 139.0 92 70.7
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 3.9e-31 138.7 127 55.1
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 3.9e-31 138.7 136 56.6
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 3.9e-31 138.7 88 71.6
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 5.1e-31 138.3 80 78.8
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 5.1e-31 138.3 96 63.5
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 1.1e-30 137.1 135 52.6
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 1.5e-30 136.7 95 65.3
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 1.9e-30 136.3 139 54.0
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 3.3e-30 135.6 95 66.3
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 4.3e-30 135.2 88 70.5
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 4.3e-30 135.2 95 64.2
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 7.4e-30 134.4 96 66.7
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 9.6e-30 134.0 87 71.3
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 1.3e-29 133.7 91 64.8
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 1.6e-29 133.3 134 50.0
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 1.6e-29 133.3 95 62.1
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 1.6e-29 133.3 95 62.1
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 1.6e-29 133.3 95 62.1
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 1.6e-29 133.3 94 64.9
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 1.6e-29 133.3 123 55.3
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 1.6e-29 133.3 96 63.5
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 3.7e-29 132.1 95 61.1
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 3.7e-29 132.1 95 61.1
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 3.7e-29 132.1 88 68.2
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 4.8e-29 131.7 113 56.6
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 4.8e-29 131.7 123 53.7
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 1.8e-28 129.8 88 69.3
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 2.4e-28 129.4 88 65.9
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 4.0e-28 128.6 91 64.8
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 6.9e-28 127.9 98 64.3
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 6.9e-28 127.9 83 67.5
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 5.8e-27 124.8 89 64.0
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 4.9e-26 121.7 74 71.6
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 9.3e-25 117.5 96 59.4
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 1.9e-22 109.8 79 60.8
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 3.3e-22 109.0 116 53.4
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 5.7e-22 108.2 115 53.0
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 1.1e-20 104.0 78 55.1
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 1.1e-20 104.0 123 45.5
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 2.4e-20 102.8 77 59.7
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 5.8e-19 98.2 80 52.5
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 7.6e-19 97.8 122 45.1
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.1e-17 94.0 95 49.5
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.1e-17 94.0 95 49.5
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 1.4e-12 77.0 47 70.2
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 2.4e-12 76.3 48 68.8


User provided reference genes

Program Settings