Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 3.6e-73 278.5 179 100.0
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 3.6e-73 278.5 179 88.3
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 4.6e-60 235.0 179 89.4
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 2.4e-56 222.6 176 85.8
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 9.3e-53 210.7 179 82.1
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 4.3e-50 201.8 180 80.0
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 8.5e-46 187.6 180 63.9
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 4.2e-45 185.3 180 75.6
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 5.5e-45 184.9 182 62.6
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 2.1e-44 183.0 183 68.3
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 2.3e-43 179.5 180 61.1
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 3.3e-42 175.6 173 62.4
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 4.3e-42 175.3 180 61.7
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 2.8e-41 172.6 183 65.6
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 2.8e-41 172.6 180 61.7
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 9.1e-40 167.5 177 60.5
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 9.1e-40 167.5 180 58.9
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 1.5e-39 166.8 177 61.0
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 2.0e-39 166.4 178 59.0
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 3.4e-39 165.6 176 67.6
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 3.4e-39 165.6 174 56.9
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 2.2e-38 162.9 180 59.4
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 8.5e-38 161.0 178 62.4
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 3.2e-37 159.1 172 55.2
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 4.2e-37 158.7 172 56.4
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 1.2e-36 157.1 176 54.5
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 1.6e-36 156.8 180 57.2
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 2.1e-36 156.4 175 53.1
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 1.8e-35 153.3 181 53.0
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 2.3e-35 152.9 178 56.2
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 3.0e-35 152.5 175 52.0
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 5.1e-35 151.8 179 58.7
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 8.8e-35 151.0 180 54.4
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 1.1e-34 150.6 181 54.1
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 2.0e-34 149.8 186 53.8
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 2.0e-34 149.8 180 53.3
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 3.3e-34 149.1 276 44.6
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 4.4e-34 148.7 178 55.6
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 4.4e-34 148.7 176 50.6
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 5.7e-34 148.3 178 59.6
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 5.7e-34 148.3 180 59.4
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 5.7e-34 148.3 181 55.2
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 1.3e-33 147.1 173 54.9
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 1.3e-33 147.1 183 54.6
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.7e-33 146.7 180 63.3
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.7e-33 146.7 178 53.9
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.2e-33 146.4 180 58.3
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 2.2e-33 146.4 178 52.2
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 6.3e-33 144.8 183 50.8
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 6.3e-33 144.8 180 52.2
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 8.2e-33 144.4 185 58.4
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 8.2e-33 144.4 194 51.5
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.1e-32 144.1 180 53.3
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.1e-32 144.1 175 62.9
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 2.4e-32 142.9 181 50.8
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 2.4e-32 142.9 178 52.2
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 1.2e-31 140.6 191 51.3
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 7.7e-31 137.9 182 53.3
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 3.8e-30 135.6 181 48.1
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 6.5e-30 134.8 181 49.2
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 8.5e-30 134.4 248 41.9
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 8.5e-30 134.4 175 48.6
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 1.1e-29 134.0 175 53.7
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 1.9e-29 133.3 169 52.1
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 3.2e-29 132.5 181 56.4
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 6.1e-28 128.3 201 53.7
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 8.0e-28 127.9 176 47.2
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 1.4e-27 127.1 181 47.5
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 3.0e-27 125.9 142 59.2
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 3.9e-27 125.6 189 47.1
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 2.6e-26 122.9 183 53.6
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 4.4e-26 122.1 183 47.5
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 2.8e-25 119.4 215 39.5
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 8.2e-25 117.9 165 55.2
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 1.8e-24 116.7 137 54.0
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.8e-24 116.7 177 48.0
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 3.1e-24 115.9 175 48.0
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 4.1e-24 115.5 183 44.8
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 2.6e-23 112.8 168 45.8
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 5.9e-23 111.7 232 39.7
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 1.7e-22 110.2 182 40.1
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 2.2e-22 109.8 166 54.2
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 2.2e-22 109.8 166 54.2
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 2.9e-22 109.4 176 42.0
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 6.5e-22 108.2 167 43.1
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 1.9e-21 106.7 148 57.4
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 4.2e-21 105.5 173 43.9
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 5.5e-21 105.1 178 39.9
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 5.5e-21 105.1 181 41.4
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 7.2e-21 104.8 166 41.6
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 2.1e-20 103.2 180 40.6
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 3.6e-20 102.4 106 59.4
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 4.7e-20 102.1 166 41.6
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 4.7e-20 102.1 166 41.6
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.0e-19 100.9 177 49.2
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 1.8e-19 100.1 168 40.5
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 1.8e-19 100.1 179 38.0
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 1.8e-19 100.1 141 48.2
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 2.3e-19 99.8 169 41.4
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 8.8e-19 97.8 98 61.2
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 8.8e-19 97.8 161 44.1
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 1.5e-18 97.1 98 70.4
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 2.0e-18 96.7 98 69.4
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 9.8e-18 94.4 168 47.0
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 4.1e-16 89.0 168 48.8
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 3.5e-15 85.9 182 50.5
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 5.9e-15 85.1 180 38.3
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 4.2e-13 79.0 105 52.4
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 4.2e-13 79.0 105 52.4
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 9.8e-10 67.8 51 66.7
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 1.8e-08 63.5 50 64.0
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 4.5e-07 58.9 100 44.0
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 1.3e-06 57.4 44 63.6
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 1.3e-06 57.4 44 63.6
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 6.6e-06 55.1 71 46.5


User provided reference genes

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