Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g065112.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.2e-63 244.2 123 100.0
Solyc05g024385.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.7e-58 229.2 123 95.1
Sopen09g010870 Solanum pennellii HOM05D000176 ORTHO05D000106 4.9e-45 184.5 96 95.8
Solyc07g150135.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.7e-43 178.7 97 92.8
Solyc05g044513.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.9e-43 177.2 96 93.8
Sopen12g020220 Solanum pennellii HOM05D000002 ORTHO05D000047 8.1e-40 167.2 96 88.5
PGSC0003DMG400029935 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.4e-28 129.8 120 62.5
PGSC0003DMG400010948 Solanum tuberosum HOM05D000176 ORTHO05D000106 3.2e-28 128.6 108 67.6
Sopen09g016220 Solanum pennellii HOM05D000176 ORTHO05D000106 5.5e-28 127.9 126 62.7
Sopen04g021620 Solanum pennellii HOM05D000176 ORTHO05D000106 7.4e-25 117.5 120 58.3
Sopen06g015550 Solanum pennellii HOM05D000176 ORTHO05D014553 1.2e-19 100.1 110 52.7
Solyc06g050375.1 Solanum lycopersicum HOM05D000176 ORTHO05D014553 2.1e-19 99.4 141 46.1
Sopen08g006090 Solanum pennellii HOM05D000176 ORTHO05D000106 6.1e-19 97.8 137 46.7
Solyc07g019577.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.4e-18 96.7 141 44.0
Sopen06g017070 Solanum pennellii HOM05D000176 ORTHO05D000106 6.7e-18 94.4 139 44.6
PGSC0003DMG400027876 Solanum tuberosum HOM05D000176 ORTHO05D000106 4.3e-17 91.7 142 43.7
PGSC0003DMG400021588 Solanum tuberosum HOM05D000176 ORTHO05D000106 3.7e-16 88.6 83 62.7
Sopen06g004480 Solanum pennellii HOM05D000176 ORTHO05D000106 2.9e-13 79.0 127 43.3
CAN.G1611.3 Capsicum annuum HOM05D000176 ORTHO05D014553 8.5e-13 77.4 141 37.6
Solyc12g056671.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.2e-12 75.1 127 41.7
PGSC0003DMG400019874 Solanum tuberosum HOM05D000176 ORTHO05D014553 1.2e-11 73.6 132 41.7
CAN.G650.30 Capsicum annuum HOM05D000176 ORTHO05D014553 4.7e-11 71.6 129 41.1
Sopen12g008340 Solanum pennellii HOM05D000176 ORTHO05D000106 3.0e-10 68.9 122 38.5
Solyc01g081584.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.1e-09 67.0 122 37.7
Solyc07g044815.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.1e-09 67.0 122 37.7
Solyc05g026520.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.0e-09 66.2 122 37.7
Solyc08g150136.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.0e-09 66.2 130 38.5
CAN.G1841.1 Capsicum annuum HOM05D000176 ORTHO05D014553 4.4e-09 65.1 107 40.2
Sopen03g009670 Solanum pennellii HOM05D000004 ORTHO05D014553 5.7e-09 64.7 127 38.6
PGSC0003DMG400041083 Solanum tuberosum HOM05D000176 ORTHO05D014553 1.3e-08 63.5 91 44.0
Solyc07g019498.1 Solanum lycopersicum HOM05D000176 ORTHO05D014553 2.2e-08 62.8 134 35.8
Solyc07g042335.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.1e-07 57.4 46 63.0
Solyc11g044457.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.5e-06 55.1 34 82.4
Sopen09g029870 Solanum pennellii HOM05D000176 ORTHO05D000106 4.5e-06 55.1 108 37.0
CAN.G1218.17 Capsicum annuum HOM05D000176 ORTHO05D014553 5.9e-06 54.7 40 67.5


User provided reference genes

Program Settings