Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g062815.1 Solanum lycopersicum HOM05D005482 ORTHO05D006502 1.9e-56 222.2 108 100.0
Solyc11g016980.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 3.7e-20 101.7 50 98.0
Sopen05g029760 Solanum pennellii HOM05D005482 ORTHO05D006502 3.7e-20 101.7 50 98.0
Solyc05g051370.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 8.2e-20 100.5 50 98.0
PGSC0003DMG400014586 Solanum tuberosum HOM05D005482 ORTHO05D006502 1.4e-19 99.8 50 96.0
Nitab4.5_0007769g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 2.0e-18 95.9 50 92.0
Nitab4.5_0000128g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 1.0e-17 93.6 50 90.0
CAN.G581.10 Capsicum annuum HOM05D005482 ORTHO05D006502 1.7e-17 92.8 50 88.0
Peaxi162Scf01142g00001 Petunia axillaris HOM05D005482 ORTHO05D006502 6.5e-17 90.9 50 86.0
Solyc12g020035.1 Solanum lycopersicum HOM05D019581 ORTHO05D006502 4.2e-16 88.2 46 91.3
SalBow3G1020 Salvia bowleyana HOM05D005482 ORTHO05D006502 1.4e-14 83.2 50 78.0
Dinv13587 Davidia involucrata HOM05D005482 ORTHO05D006502 1.5e-13 79.7 49 75.5
Cc07_g13970 Coffea canephora HOM05D005482 ORTHO05D006502 2.0e-13 79.3 83 54.2
CSS0020800 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 4.8e-12 74.7 61 55.7
CSS0030560 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 4.8e-12 74.7 61 55.7
SGA_v2.0_scaffold108G30927 Striga asiatica HOM05D005482 ORTHO05D006502 1.1e-11 73.6 50 68.0
Lj2A532G30 Lonicera japonica HOM05D005482 ORTHO05D006502 1.8e-11 72.8 49 65.3
unitig_736.g22591 Utricularia gibba HOM05D005482 ORTHO05D006502 2.4e-11 72.4 62 58.1
MSTRG.23386 Avicennia marina HOM05D005482 ORTHO05D006502 3.1e-11 72.0 50 66.0
Oeu042113.2 Olea europaea HOM05D005482 ORTHO05D006502 4.1e-11 71.6 50 66.0
Dinv36943 Davidia involucrata HOM05D005482 ORTHO05D006502 7.0e-11 70.9 50 64.0
Migut.H02285 Erythranthe guttata HOM05D005482 ORTHO05D006502 7.0e-11 70.9 46 69.6
Gohir.A12G084900 Gossypium hirsutum HOM05D005482 ORTHO05D006502 7.0e-11 70.9 49 63.3
Cfa006872 Carpinus fangiana HOM05D005482 ORTHO05D006502 9.1e-11 70.5 49 67.3
Haze_03890 Corylus avellana HOM05D005482 ORTHO05D006502 9.1e-11 70.5 49 67.3
Hma1.2p1_0369F.1_g137390 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 9.1e-11 70.5 56 57.1
Hma1.2p1_0369F.1_g137400 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 1.2e-10 70.1 62 53.2
Oeu017109.1 Olea europaea HOM05D005482 ORTHO05D006502 1.2e-10 70.1 49 63.3
Gohir.D12G079700 Gossypium hirsutum HOM05D005482 ORTHO05D006502 1.6e-10 69.7 49 61.2
PSO170G0154 Papaver somniferum HOM05D005482 ORTHO05D006502 1.6e-10 69.7 51 62.7
PSO210G6830 Papaver somniferum HOM05D005482 ORTHO05D006502 1.6e-10 69.7 51 62.7
Gorai.008G093000 Gossypium raimondii HOM05D005482 ORTHO05D006502 2.0e-10 69.3 49 61.2
Thecc.01G089100 Theobroma cacao HOM05D005482 ORTHO05D006502 2.0e-10 69.3 49 63.3
Cpa.g.sc55.13 Carica papaya HOM05D005482 ORTHO05D006502 5.9e-10 67.8 49 61.2
COL.COLO4_27370 Corchorus olitorius HOM05D005482 ORTHO05D006502 5.9e-10 67.8 49 61.2
TAR625G0934 Trochodendron aralioides HOM05D005482 ORTHO05D006502 5.9e-10 67.8 49 65.3
QL06p035944 Quercus lobata HOM05D005482 ORTHO05D006502 7.7e-10 67.4 49 63.3
Sopen06g006220 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-10 67.4 31 100.0
vmacro18548 Vaccinium macrocarpon HOM05D005482 ORTHO05D006502 7.7e-10 67.4 49 61.2
GSVIVG01002523001 Vitis vinifera HOM05D005482 ORTHO05D006502 1.0e-09 67.0 49 59.2
Rhsim08G0017200 Rhododendron simsii HOM05D005482 ORTHO05D006502 1.7e-09 66.2 49 59.2
Prupe.6G203300 Prunus persica HOM05D005482 ORTHO05D006502 2.2e-09 65.9 49 63.3
CiPaw.07G046300 Carya illinoinensis HOM05D005482 ORTHO05D006502 2.9e-09 65.5 49 61.2
Atru.chr3.678 Acer truncatum HOM05D005482 ORTHO05D006502 1.5e-08 63.2 80 42.5
Atru.chr3.724 Acer truncatum HOM05D005482 ORTHO05D006502 1.5e-08 63.2 80 42.5
DCAR_003442 Daucus carota HOM05D005482 ORTHO05D006502 2.5e-08 62.4 49 57.1
HanXRQChr12g0368991 Helianthus annuus HOM05D005482 ORTHO05D006502 2.5e-08 62.4 47 63.8
MD01G1040900 Malus domestica HOM05D005482 ORTHO05D006502 2.5e-08 62.4 49 61.2
ECA246G0291 Erigeron canadensis HOM05D005482 ORTHO05D006502 4.2e-08 61.6 47 63.8
CANSAT01G3178 Cannabis sativa HOM05D005482 ORTHO05D006502 5.5e-08 61.2 49 53.1
TWI74G1080 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 7.2e-08 60.8 49 55.1
Manes.12G125300 Manihot esculenta HOM05D005482 ORTHO05D006502 9.4e-08 60.5 49 51.0
MD15G1310400 Malus domestica HOM05D005482 ORTHO05D006502 1.2e-07 60.1 49 59.2
Aqoxy5G01366 Aquilegia oxysepala HOM05D005482 ORTHO05D006502 2.1e-07 59.3 62 50.0
CDE07G1819 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 2.1e-07 59.3 76 39.5
RcHm_v2.0_Chr2g0110941 Rosa chinensis HOM05D005482 ORTHO05D006502 2.1e-07 59.3 49 57.1
Eucgr.H02447 Eucalyptus grandis HOM05D005482 ORTHO05D006502 2.7e-07 58.9 76 43.4
Lsat_1_v5_gn_3_62981 Lactuca sativa HOM05D005482 ORTHO05D006502 2.7e-07 58.9 48 60.4
CiPaw.08G141000 Carya illinoinensis HOM05D005482 ORTHO05D006502 3.6e-07 58.5 49 55.1
FvH4_1g19490 Fragaria vesca HOM05D005482 ORTHO05D006502 8.0e-07 57.4 49 53.1
FAN19G3176 Fragaria x ananassa HOM05D005482 ORTHO05D006502 8.0e-07 57.4 49 53.1
FAN26G3253 Fragaria x ananassa HOM05D005482 ORTHO05D006502 8.0e-07 57.4 49 53.1
TWI77G0993 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 8.0e-07 57.4 49 51.0
Duzib264G1263 Durio zibethinus HOM05D005482 ORTHO05D006502 1.0e-06 57.0 42 54.8
EL10Ac6g15187 Beta vulgaris HOM05D005482 ORTHO05D006502 1.8e-06 56.2 55 47.3
FAN23G0007 Fragaria x ananassa HOM05D005482 ORTHO05D006502 1.8e-06 56.2 49 53.1
Sabra07G0009200 Salix brachista HOM05D005482 ORTHO05D006502 1.8e-06 56.2 54 46.3
PGSC0003DMG400008480 Solanum tuberosum HOM05D001512 ORTHO05D001574 1.8e-06 56.2 31 80.6
Ciclev10025202m.g Citrus clementina HOM05D005482 ORTHO05D006502 2.3e-06 55.8 52 46.2
Potri.007G011800 Populus trichocarpa HOM05D005482 ORTHO05D006502 2.3e-06 55.8 42 57.1
PGR102G1704 Punica granatum HOM05D005482 ORTHO05D006502 2.3e-06 55.8 47 53.2
arahy.Tifrunner.gnm1.ann1.52LQAS Arachis hypogaea HOM05D005482 ORTHO05D006502 4.0e-06 55.1 48 56.2
arahy.Tifrunner.gnm1.ann1.HVQN9F Arachis hypogaea HOM05D005482 ORTHO05D006502 4.0e-06 55.1 48 56.2
Sabra15G0071300 Salix brachista HOM05D005482 ORTHO05D006502 5.2e-06 54.7 54 44.4
FAN28G0477 Fragaria x ananassa HOM05D005482 ORTHO05D006502 6.7e-06 54.3 49 51.0


User provided reference genes

Program Settings