Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g062200.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.3e-66 256.5 157 100.0
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 9.1e-36 154.1 276 42.4
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.4e-20 103.6 102 41.2
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.6e-14 82.8 164 31.1
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.0e-10 70.9 254 29.9
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 2.9e-10 69.3 227 22.0
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.1e-08 63.2 97 38.1
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.6e-08 62.4 214 20.6
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.1e-08 61.6 89 37.1
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.0e-07 60.8 89 36.0
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 1.0e-07 60.8 61 45.9
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.4e-07 60.5 83 38.6
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 1.8e-07 60.1 83 37.3
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 2.3e-07 59.7 83 37.3
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 3.0e-07 59.3 89 36.0
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 3.0e-07 59.3 103 47.6
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 4.0e-07 58.9 51 45.1
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 5.2e-07 58.5 72 37.5
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 5.2e-07 58.5 68 38.2
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 5.2e-07 58.5 68 38.2
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 6.8e-07 58.2 64 45.3
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 6.8e-07 58.2 72 38.9
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 8.9e-07 57.8 89 36.0
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 8.9e-07 57.8 68 38.2
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 8.9e-07 57.8 68 38.2
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 8.9e-07 57.8 68 38.2
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 1.2e-06 57.4 68 38.2
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 1.2e-06 57.4 68 38.2
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 1.2e-06 57.4 68 38.2
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.5e-06 57.0 68 38.2
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 1.5e-06 57.0 68 38.2
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.0e-06 56.6 68 38.2
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 2.0e-06 56.6 67 38.8
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 2.0e-06 56.6 68 38.2
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 2.0e-06 56.6 68 36.8
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 2.0e-06 56.6 68 39.7
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 3.4e-06 55.8 50 44.0
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 3.4e-06 55.8 68 36.8
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 3.4e-06 55.8 68 36.8
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 3.4e-06 55.8 68 36.8
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 3.4e-06 55.8 68 36.8
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 3.4e-06 55.8 68 38.2
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 3.4e-06 55.8 68 36.8
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 4.4e-06 55.5 52 42.3
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 4.4e-06 55.5 49 42.9
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 4.4e-06 55.5 68 36.8
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 5.8e-06 55.1 68 36.8
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 5.8e-06 55.1 49 42.9
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 5.8e-06 55.1 68 36.8
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 5.8e-06 55.1 68 35.3
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 5.8e-06 55.1 68 36.8
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 7.5e-06 54.7 68 36.8
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 7.5e-06 54.7 68 36.8
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 7.5e-06 54.7 68 36.8
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 7.5e-06 54.7 89 32.6


User provided reference genes

Program Settings