Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g062060.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.9e-118 429.1 207 100.0
Sopen02g013020 Solanum pennellii HOM05D008149 ORTHO05D010130 3.5e-112 408.3 207 94.7
Solyc02g061870.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 3.5e-96 355.1 204 84.8
PGSC0003DMG400036456 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.2e-61 239.6 196 65.3
Sopen02g013040 Solanum pennellii HOM05D008149 ORTHO05D010130 2.0e-43 179.9 236 47.9
Solyc02g061900.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 7.8e-43 177.9 274 43.1
PGSC0003DMG400023892 Solanum tuberosum HOM05D008149 ORTHO05D010130 5.6e-41 171.8 222 49.5
PGSC0003DMG400023889 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.2e-40 170.6 146 61.6
Sopen02g013030 Solanum pennellii HOM05D008149 ORTHO05D010130 2.8e-40 169.5 221 47.5
CAN.G158.3 Capsicum annuum HOM05D008149 ORTHO05D010130 1.2e-38 164.1 168 51.2
Sopen02g013010 Solanum pennellii HOM05D008149 ORTHO05D010130 3.4e-38 162.5 157 56.1
Sopen02g012890 Solanum pennellii HOM05D008149 ORTHO05D010130 2.4e-36 156.4 164 53.0
PGSC0003DMG400035879 Solanum tuberosum HOM05D008149 ORTHO05D010130 3.2e-36 156.0 154 55.8
PGSC0003DMG400023888 Solanum tuberosum HOM05D008149 ORTHO05D010130 4.1e-36 155.6 146 58.2
PGSC0003DMG400037967 Solanum tuberosum HOM05D008149 ORTHO05D010130 8.6e-34 147.9 243 42.8
Peaxi162Scf00493g00439 Petunia axillaris HOM05D008149 ORTHO05D010130 1.1e-31 141.0 144 52.1
Solyc02g061910.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.1e-31 141.0 239 41.4
PGSC0003DMG400045200 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.1e-31 141.0 150 54.0
Solyc02g062210.3 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.4e-31 140.6 199 41.7
PGSC0003DMG400042894 Solanum tuberosum HOM05D008149 ORTHO05D010130 3.1e-31 139.4 179 45.8
Nitab4.5_0001019g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 5.2e-31 138.7 150 48.7
Peaxi162Scf00066g00145 Petunia axillaris HOM05D008149 ORTHO05D010130 4.4e-30 135.6 159 47.8
Peaxi162Scf00016g00168 Petunia axillaris HOM05D008149 ORTHO05D010130 1.7e-29 133.7 183 43.7
CAN.G308.65 Capsicum annuum HOM05D008149 ORTHO05D010130 2.9e-29 132.9 149 47.0
Nitab4.5_0009705g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 7.0e-28 128.3 149 49.0
Solyc04g025760.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 2.7e-27 126.3 208 39.4
Nitab4.5_0013476g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 8.6e-26 121.3 150 47.3
Nitab4.5_0001907g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.5e-25 119.8 160 44.4
Peaxi162Scf00650g00014 Petunia axillaris HOM05D008149 ORTHO05D010130 2.5e-25 119.8 143 48.3
PGSC0003DMG400040065 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.1e-24 116.7 138 44.2
Peaxi162Scf01324g00211 Petunia axillaris HOM05D017006 ORTHO05D010130 1.4e-23 114.0 150 44.7
Peaxi162Scf01324g00212 Petunia axillaris HOM05D017006 ORTHO05D010130 1.4e-23 114.0 150 44.7
Peaxi162Scf01780g00003 Petunia axillaris HOM05D017006 ORTHO05D010130 1.4e-23 114.0 150 44.7
Peaxi162Scf00245g00112 Petunia axillaris HOM05D017006 ORTHO05D010130 1.8e-23 113.6 150 46.7
Sopen02g012300 Solanum pennellii HOM05D010460 ORTHO05D010130 2.2e-21 106.7 145 40.7
Sopen00g013830 Solanum pennellii HOM05D008149 ORTHO05D010130 3.7e-21 105.9 142 40.8
Solyc02g062090.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 6.4e-21 105.1 76 65.8
CAN.G569.40 Capsicum annuum HOM05D008149 ORTHO05D010130 2.4e-20 103.2 151 43.0
Nitab4.5_0001874g0070 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.4e-20 103.2 169 37.9
Nitab4.5_0001896g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 5.4e-20 102.1 149 40.9
Peaxi162Scf00108g00028 Petunia axillaris HOM05D008149 ORTHO05D010130 5.4e-20 102.1 149 43.0
Nitab4.5_0010957g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 7.1e-20 101.7 170 38.8
Nitab4.5_0000608g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 4.6e-19 99.0 169 38.5
Nitab4.5_0000082g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 6.0e-19 98.6 165 38.2
Peaxi162Scf00245g01014 Petunia axillaris HOM05D017006 ORTHO05D010130 5.1e-18 95.5 194 35.1
Nitab4.5_0003562g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 6.6e-18 95.1 169 36.1
Sopen10g029870 Solanum pennellii HOM05D008149 ORTHO05D010130 8.6e-18 94.7 141 41.1
CAN.G1485.2 Capsicum annuum HOM05D008149 ORTHO05D010130 2.5e-17 93.2 116 44.0
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 3.3e-17 92.8 205 30.7
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 3.3e-17 92.8 205 30.7
CAN.G1095.3 Capsicum annuum HOM05D000069 ORTHO05D010130 7.3e-17 91.7 164 34.1
Solyc10g079220.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 8.1e-16 88.2 141 38.3
Solyc02g062080.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.8e-15 87.0 94 51.1
Sopen10g022760 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-15 85.9 141 38.3
PGSC0003DMG400008178 Solanum tuberosum HOM05D008149 ORTHO05D010130 5.8e-14 82.0 147 40.1
Solyc02g062070.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 7.6e-14 81.6 119 43.7
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.4e-12 77.4 146 37.7
PGSC0003DMG400007065 Solanum tuberosum HOM05D008050 ORTHO05D003796 4.2e-12 75.9 174 31.0
CAN.G1612.2 Capsicum annuum HOM05D008149 ORTHO05D010130 9.2e-12 74.7 130 36.2
Peaxi162Scf01007g00022 Petunia axillaris HOM05D009491 ORTHO05D003796 1.6e-11 73.9 189 27.0
Peaxi162Scf01007g00024 Petunia axillaris HOM05D009491 ORTHO05D003796 1.6e-11 73.9 189 27.0
Peaxi162Scf01007g00210 Petunia axillaris HOM05D009491 ORTHO05D003796 1.6e-11 73.9 189 27.0
CAN.G641.11 Capsicum annuum HOM05D008149 ORTHO05D010130 6.6e-10 68.6 109 36.7
FvH4_4g12410 Fragaria vesca HOM05D002630 ORTHO05D000952 1.9e-09 67.0 204 26.5
Nitab4.5_0000016g0610 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.5e-09 66.6 144 31.9
Peaxi162Scf00009g00021 Petunia axillaris HOM05D009491 ORTHO05D003796 2.5e-09 66.6 174 24.7
Nitab4.5_0001968g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.3e-09 66.2 131 34.4
FAN12G0860 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.3e-09 65.9 205 26.8
FAN12G3767 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.3e-09 65.9 205 26.8
CAN.G616.30 Capsicum annuum HOM05D009491 ORTHO05D003796 5.6e-09 65.5 182 25.3
Cfa013250 Carpinus fangiana HOM05D009365 ORTHO05D000952 5.6e-09 65.5 134 33.6
Nitab4.5_0000499g0070 Nicotiana tabacum HOM05D008050 ORTHO05D003796 7.3e-09 65.1 168 26.8
Peaxi162Scf00245g00118 Petunia axillaris HOM05D008149 ORTHO05D010130 7.3e-09 65.1 104 40.4
PGSC0003DMG400038867 Solanum tuberosum HOM05D009491 ORTHO05D003796 7.3e-09 65.1 168 26.8
Thecc.05G051100 Theobroma cacao HOM05D000010 ORTHO05D000952 1.2e-08 64.3 125 34.4
Duzib235G1304 Durio zibethinus HOM05D000010 ORTHO05D000952 1.6e-08 63.9 147 26.5
FAN07G2769 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.2e-08 62.0 203 27.1
Peaxi162Scf00397g00002 Petunia axillaris HOM05D009491 ORTHO05D003796 6.2e-08 62.0 173 26.6
Sopen04g028020 Solanum pennellii HOM05D007636 ORTHO05D003796 6.2e-08 62.0 180 26.7
FAN17G1202 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.1e-08 61.6 205 27.3
Nitab4.5_0009705g0050 Nicotiana tabacum HOM05D008149 ORTHO05D010130 8.1e-08 61.6 62 50.0
Sopen04g028280 Solanum pennellii HOM05D007636 ORTHO05D003796 8.1e-08 61.6 159 27.7
Gohir.A06G206200 Gossypium hirsutum HOM05D000010 ORTHO05D000952 1.1e-07 61.2 142 33.1
Gohir.A06G206300 Gossypium hirsutum HOM05D000010 ORTHO05D000952 1.1e-07 61.2 143 32.9
Nitab4.5_0010159g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.1e-07 61.2 191 24.6
Sopen04g028190 Solanum pennellii HOM05D007636 ORTHO05D003796 1.1e-07 61.2 159 27.7
PGSC0003DMG400009377 Solanum tuberosum HOM05D009491 ORTHO05D003796 1.1e-07 61.2 124 29.8
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 1.8e-07 60.5 149 32.2
Rhsim04G0211600 Rhododendron simsii HOM05D008858 ORTHO05D000952 3.1e-07 59.7 157 31.8
Thecc.06G226600 Theobroma cacao HOM05D000010 ORTHO05D000952 3.1e-07 59.7 121 30.6
Duzib150G0455 Durio zibethinus HOM05D000010 ORTHO05D000151 4.0e-07 59.3 160 30.6
Solyc03g114260.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 4.0e-07 59.3 149 32.2
PGSC0003DMG400000154 Solanum tuberosum HOM05D009491 ORTHO05D003796 4.0e-07 59.3 197 22.3
SGA_v2.0_scaffold18G08273 Striga asiatica HOM05D007636 ORTHO05D003796 4.0e-07 59.3 147 27.9
Cpa.g.sc435.1 Carica papaya HOM05D000010 ORTHO05D000151 5.3e-07 58.9 153 26.1
Eucgr.B02485 Eucalyptus grandis HOM05D000010 ORTHO05D000151 5.3e-07 58.9 163 29.4
A05p01760 Brassica napus HOM05D009272 ORTHO05D010513 6.9e-07 58.5 170 30.0
BraA05t19173Z Brassica rapa HOM05D009272 ORTHO05D010513 6.9e-07 58.5 170 30.0
MD11G1190900 Malus domestica HOM05D000010 ORTHO05D000151 6.9e-07 58.5 163 25.2
PGSC0003DMG400023887 Solanum tuberosum HOM05D008149 ORTHO05D010130 6.9e-07 58.5 96 41.7
Hma1.2p1_1030F.1_g249870 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 9.0e-07 58.2 159 28.3
Nitab4.5_0000008g0630 Nicotiana tabacum HOM05D010426 ORTHO05D003796 9.0e-07 58.2 114 34.2
Cpa.g.sc80.14 Carica papaya HOM05D001613 ORTHO05D001556 1.5e-06 57.4 112 36.6
Manes.11G142800 Manihot esculenta HOM05D000010 ORTHO05D000151 1.5e-06 57.4 160 28.8
Prupe.6G092100 Prunus persica HOM05D010397 ORTHO05D000952 4.4e-06 55.8 175 27.4
Nitab4.5_0025925g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 7.6e-06 55.1 144 29.9
RcHm_v2.0_Chr3g0471331 Rosa chinensis HOM05D000010 ORTHO05D022624 7.6e-06 55.1 124 28.2
CAN.G78.33 Capsicum annuum HOM05D008050 ORTHO05D003796 9.9e-06 54.7 179 23.5
Cc01_g11350 Coffea canephora HOM05D000010 ORTHO05D000151 9.9e-06 54.7 154 27.3
Eucgr.E00551 Eucalyptus grandis HOM05D000010 ORTHO05D000952 9.9e-06 54.7 112 29.5


User provided reference genes

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