Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 3.0e-125 451.8 220 100.0
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 7.3e-124 447.2 220 98.6
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 1.5e-113 412.9 220 91.8
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 9.3e-87 323.9 236 70.3
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 5.5e-71 271.6 228 63.6
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 8.2e-67 257.7 225 58.2
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 1.3e-64 250.4 203 62.1
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 2.2e-64 249.6 192 63.0
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 5.0e-64 248.4 205 61.5
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 6.1e-62 241.5 199 61.3
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.0e-61 240.7 181 63.0
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.4e-61 240.4 181 63.0
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 2.3e-61 239.6 189 61.4
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 4.4e-60 235.3 217 56.2
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 7.4e-60 234.6 185 61.6
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 1.7e-59 233.4 204 57.4
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 3.7e-59 232.3 195 57.4
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 4.8e-59 231.9 200 59.0
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 4.1e-58 228.8 187 59.4
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.6e-57 226.1 206 55.3
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 4.5e-57 225.3 194 56.2
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 4.5e-57 225.3 233 52.4
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 4.5e-57 225.3 182 58.8
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 7.7e-57 224.6 192 57.3
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 1.3e-56 223.8 194 56.2
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 6.5e-56 221.5 214 53.3
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 2.5e-55 219.5 193 59.6
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 3.2e-55 219.2 196 56.1
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 4.2e-55 218.8 184 57.6
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 4.2e-55 218.8 197 56.9
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 1.2e-54 217.2 225 51.6
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.1e-54 216.5 215 52.6
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 3.6e-54 215.7 215 53.0
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 3.6e-54 215.7 187 55.6
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 1.0e-53 214.2 198 57.1
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 1.0e-53 214.2 215 54.0
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 1.4e-53 213.8 217 51.2
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 1.4e-53 213.8 206 51.9
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 1.8e-53 213.4 182 57.1
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 3.0e-53 212.6 198 52.5
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 5.2e-53 211.8 183 55.2
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 2.6e-52 209.5 183 54.6
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 4.4e-52 208.8 183 54.6
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 4.4e-52 208.8 183 54.6
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 5.7e-52 208.4 208 50.5
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 9.7e-52 207.6 185 54.6
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 9.7e-52 207.6 185 54.6
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 3.7e-51 205.7 162 56.8
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 8.2e-51 204.5 186 54.3
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 2.4e-50 203.0 221 47.5
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 2.0e-49 199.9 183 54.1
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 1.0e-48 197.6 185 50.8
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 2.2e-48 196.4 185 51.9
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 3.2e-47 192.6 140 66.4
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 6.1e-46 188.3 183 51.4
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.8e-45 186.8 169 55.0
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 6.7e-45 184.9 214 46.3
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 8.8e-45 184.5 170 54.1
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 7.5e-44 181.4 206 47.6
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 7.0e-42 174.9 231 43.3
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 5.9e-41 171.8 99 82.8
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 1.7e-40 170.2 160 51.9
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 2.9e-40 169.5 127 60.6
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 3.8e-40 169.1 233 40.3
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 8.5e-40 167.9 211 44.1
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 4.2e-39 165.6 230 42.6
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 1.2e-36 157.5 187 43.3
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 5.7e-36 155.2 223 41.7
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 5.7e-36 155.2 155 51.6
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 7.5e-36 154.8 134 54.5
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 1.7e-35 153.7 222 42.3
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 2.8e-35 152.9 180 45.0
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 3.7e-35 152.5 113 61.1
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 8.3e-35 151.4 180 43.3
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 1.4e-34 150.6 118 58.5
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 1.8e-34 150.2 133 56.4
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 1.8e-34 150.2 194 45.9
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 2.4e-34 149.8 129 54.3
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 4.1e-34 149.1 143 54.5
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 1.2e-33 147.5 119 57.1
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 7.7e-33 144.8 154 48.7
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 1.0e-32 144.4 146 50.0
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 1.2e-28 131.0 114 55.3
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.8e-27 126.3 232 40.1
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.8e-26 123.6 100 57.0
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 5.9e-25 118.6 99 57.6
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 2.3e-24 116.7 94 57.4
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 2.3e-24 116.7 99 56.6
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 6.6e-24 115.2 152 42.8
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 5.2e-21 105.5 212 29.2
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 1.2e-20 104.4 100 50.0
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 9.2e-18 94.7 81 53.1
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 5.9e-17 92.0 201 33.8
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 4.7e-14 82.4 57 73.7
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 3.6e-06 56.2 82 37.8


User provided reference genes

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