Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-93 346.3 175 100.0
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 3.8e-51 205.3 160 70.0
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-47 193.7 134 73.1
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 5.7e-47 191.4 139 74.8
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 2.7e-36 156.0 146 58.2
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-33 147.1 147 53.1
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 2.1e-33 146.4 136 55.9
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-31 139.8 98 73.5
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-31 139.8 104 66.3
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 1.3e-30 137.1 80 87.5
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 2.9e-30 136.0 108 63.0
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.4e-29 131.7 103 64.1
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.8e-28 127.9 181 43.1
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 3.9e-27 125.6 104 62.5
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-26 123.6 103 61.2
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-26 122.5 132 48.5
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-26 122.5 100 62.0
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 4.3e-26 122.1 135 52.6
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-25 120.6 104 58.7
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-24 117.5 161 44.7
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.6e-23 112.8 107 53.3
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-22 110.5 100 55.0
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 2.2e-22 109.8 156 42.3
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-21 106.3 98 58.2
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 3.2e-21 105.9 143 42.7
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-21 105.5 112 50.0
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-20 103.6 92 55.4
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 1.6e-20 103.6 133 43.6
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 2.1e-20 103.2 149 40.9
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 2.7e-20 102.8 149 40.9
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-20 102.8 122 44.3
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.6e-19 98.2 122 45.9
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.5e-18 97.1 57 82.5
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-18 95.9 168 40.5
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-18 95.9 80 62.5
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.6e-18 95.1 102 51.0
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 7.3e-18 94.7 151 37.1
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 7.3e-18 94.7 142 40.1
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.3e-18 94.7 92 55.4
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 9.5e-18 94.4 96 54.2
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-17 93.6 63 77.8
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.1e-17 93.2 142 39.4
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-17 92.4 69 63.8
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.2e-17 91.7 69 63.8
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.1e-17 91.3 73 60.3
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-16 90.9 152 35.5
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 1.8e-16 90.1 120 43.3
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-16 89.7 161 36.6
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 5.2e-16 88.6 69 63.8
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 5.2e-16 88.6 149 34.2
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 5.2e-16 88.6 135 35.6
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-16 88.6 63 66.7
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-16 88.6 167 38.3
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.2e-16 88.6 75 60.0
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 6.8e-16 88.2 70 62.9
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.9e-16 87.8 79 57.0
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-15 87.4 68 60.3
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-15 87.4 164 36.0
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-15 87.0 78 52.6
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 2.0e-15 86.7 76 59.2
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 2.6e-15 86.3 104 51.0
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 3.4e-15 85.9 76 53.9
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-15 84.3 76 53.9
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-15 84.3 110 45.5
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-15 84.3 89 50.6
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 1.3e-14 84.0 137 35.0
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 1.3e-14 84.0 137 35.0
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-14 84.0 159 36.5
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 2.9e-14 82.8 137 35.0
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.7e-14 82.4 82 53.7
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-14 82.0 91 48.4
Sopen02g008430 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-14 81.6 41 90.2
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.4e-14 81.6 82 52.4
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 8.4e-14 81.3 82 53.7
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.4e-14 81.3 83 47.0
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-13 80.9 82 57.3
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 1.4e-13 80.5 151 33.8
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.9e-13 80.1 63 61.9
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 2.4e-13 79.7 62 61.3
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 3.2e-13 79.3 137 33.6
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 3.2e-13 79.3 136 34.6
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-13 79.3 156 33.3
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 7.1e-13 78.2 61 60.7
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 9.2e-13 77.8 147 32.7
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-12 77.4 51 74.5
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-12 77.4 51 74.5
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-12 77.0 53 71.7
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-12 76.6 58 65.5
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.6e-12 75.5 62 56.5
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 7.8e-12 74.7 136 36.0
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 7.8e-12 74.7 62 59.7
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.0e-11 74.3 81 45.7
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-11 74.3 56 58.9
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.3e-11 73.9 153 33.3
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.3e-11 73.9 147 32.7
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-10 70.5 116 37.1
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.9e-10 70.1 102 39.2
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 2.5e-10 69.7 49 61.2
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 4.3e-10 68.9 70 48.6
Solyc10g052810.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.6e-10 68.6 57 59.6
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 9.6e-10 67.8 102 36.3
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 2.1e-09 66.6 135 31.1
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.1e-09 66.6 92 41.3
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.7e-09 65.5 78 43.6
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 8.1e-09 64.7 114 35.1
EL10Ac2g03390 Beta vulgaris HOM05D003888 ORTHO05D007163 2.4e-08 63.2 104 33.7
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.8e-08 61.6 64 46.9
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.0e-07 60.1 67 43.3
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.4e-07 58.9 69 43.5
Nitab4.5_0001375g0180 Nicotiana tabacum HOM05D003888 ORTHO05D007163 5.8e-07 58.5 61 52.5
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 7.6e-07 58.2 81 37.0
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 9.9e-07 57.8 39 66.7
Solyc09g057900.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-06 57.0 32 84.4
Sc17g0002940 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.9e-06 56.2 67 44.8
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 132 28.0
Peaxi162Scf00992g00013 Petunia axillaris HOM05D003888 ORTHO05D007163 8.4e-06 54.7 76 36.8


User provided reference genes

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