Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g038790.3 Solanum lycopersicum HOM05D010460 ORTHO05D014683 1.3e-106 389.8 202 100.0
Sopen02g012330 Solanum pennellii HOM05D010460 ORTHO05D003043 4.7e-69 265.0 207 72.0
Sopen02g012300 Solanum pennellii HOM05D010460 ORTHO05D010130 1.4e-68 263.5 207 72.0
Sopen02g012350 Solanum pennellii HOM05D010460 ORTHO05D014683 5.2e-68 261.5 207 71.5
Solyc00g012540.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 2.2e-66 256.1 200 70.5
Sopen02g012220 Solanum pennellii HOM05D010460 ORTHO05D014683 3.7e-66 255.4 206 68.9
Solyc00g007350.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 1.4e-65 253.4 201 69.7
Sopen02g012290 Solanum pennellii HOM05D010460 ORTHO05D014683 7.0e-65 251.1 183 74.9
Solyc00g284510.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 1.8e-52 209.9 207 62.3
Sopen02g012280 Solanum pennellii HOM05D010460 ORTHO05D014683 1.9e-46 189.9 190 55.8
Sopen02g012320 Solanum pennellii HOM05D010460 ORTHO05D014683 1.2e-40 170.6 151 66.2
PGSC0003DMG400041733 Solanum tuberosum HOM05D010460 ORTHO05D003043 3.0e-39 166.0 394 37.8
PGSC0003DMG400003556 Solanum tuberosum HOM05D002848 ORTHO05D003043 1.4e-33 147.1 148 58.1
Solyc00g198360.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 1.6e-29 133.7 124 63.7
Solyc00g007450.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 1.8e-28 130.2 115 67.0
Nitab4.5_0005721g0090 Nicotiana tabacum HOM05D002848 ORTHO05D003043 2.9e-18 96.3 129 44.2
CAN.G1671.1 Capsicum annuum HOM05D002848 ORTHO05D003043 4.9e-18 95.5 133 44.4
Solyc02g084200.3 Solanum lycopersicum HOM05D002848 ORTHO05D003043 1.9e-17 93.6 129 44.2
Sopen02g028940 Solanum pennellii HOM05D002848 ORTHO05D003043 4.6e-16 89.0 129 41.9
Solyc02g084160.3 Solanum lycopersicum HOM05D010460 ORTHO05D003043 5.3e-12 75.5 102 52.9
Nitab4.5_0004254g0010 Nicotiana tabacum HOM05D002848 ORTHO05D030274 5.8e-11 72.0 96 41.7
Solyc02g084080.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 5.8e-11 72.0 110 50.0
Solyc02g084110.1 Solanum lycopersicum HOM05D010460 ORTHO05D030274 2.9e-10 69.7 141 41.1
Sopen02g028880 Solanum pennellii HOM05D010460 ORTHO05D037645 2.5e-09 66.6 83 53.0
Dinv33617 Davidia involucrata HOM05D002848 ORTHO05D003043 7.1e-09 65.1 124 34.7
arahy.Tifrunner.gnm1.ann1.0H5DHB Arachis hypogaea HOM05D002848 ORTHO05D003043 1.6e-08 63.9 148 31.1
arahy.Tifrunner.gnm1.ann1.9DZU8H Arachis hypogaea HOM05D002848 ORTHO05D003043 1.6e-08 63.9 148 31.1
Sopen02g028870 Solanum pennellii HOM05D010460 ORTHO05D030274 1.6e-08 63.9 138 41.3
Lj2g0018127 Lotus japonicus HOM05D002848 ORTHO05D003043 3.5e-08 62.8 169 32.0
Sed0014337 Sechium edule HOM05D002848 ORTHO05D003043 3.5e-08 62.8 149 32.9
PGSC0003DMG400003555 Solanum tuberosum HOM05D002848 ORTHO05D030274 4.6e-08 62.4 163 39.9
MELO3C007890.2 Cucumis melo HOM05D002848 ORTHO05D003043 6.1e-08 62.0 148 33.1
CsaV3_2G029390 Cucumis sativus L. HOM05D002848 ORTHO05D003043 6.1e-08 62.0 123 33.3
Sed0026959 Sechium edule HOM05D002848 ORTHO05D003043 6.1e-08 62.0 145 31.7
CsaV3_6G046970 Cucumis sativus L. HOM05D002848 ORTHO05D003043 7.9e-08 61.6 148 33.8
ClCG08G014420 Citrullus lanatus HOM05D004047 ORTHO05D004772 1.0e-07 61.2 189 28.6
CANSAT25G2982 Cannabis sativa HOM05D002848 ORTHO05D003043 1.3e-07 60.8 134 32.1
ClCG01G020100 Citrullus lanatus HOM05D002848 ORTHO05D003043 1.8e-07 60.5 138 32.6
unitig_578.g16090 Utricularia gibba HOM05D002848 ORTHO05D003043 1.8e-07 60.5 191 27.2
CSS0044135 Camellia sinensis var. sinensis HOM05D002848 ORTHO05D003043 6.7e-07 58.5 95 34.7
CiPaw.08G132900 Carya illinoinensis HOM05D002848 ORTHO05D003043 6.7e-07 58.5 213 28.6
Gohir.A06G005500 Gossypium hirsutum HOM05D002848 ORTHO05D003043 8.7e-07 58.2 186 26.9
C08p26460 Brassica napus HOM05D002848 ORTHO05D003043 1.1e-06 57.8 262 23.7
BolC8t50261H Brassica oleracea HOM05D002848 ORTHO05D003043 1.5e-06 57.4 263 24.3
ClCG01G020170 Citrullus lanatus HOM05D002848 ORTHO05D003043 1.9e-06 57.0 148 31.1
MSTRG.1211 Avicennia marina HOM05D002848 ORTHO05D003043 3.3e-06 56.2 159 27.7
BcaB01g00544 Brassica carinata HOM05D002848 ORTHO05D003043 3.3e-06 56.2 214 24.3
CAN.G847.13 Capsicum annuum HOM05D002848 ORTHO05D003043 4.3e-06 55.8 171 25.7
Thhalv10010301m.g Eutrema salsugineum HOM05D002848 ORTHO05D003043 4.3e-06 55.8 217 25.8
Haze_03792 Corylus avellana HOM05D002848 ORTHO05D003043 5.7e-06 55.5 145 29.0
Sp1g17660 Schrenkiella parvula HOM05D002848 ORTHO05D003043 5.7e-06 55.5 109 33.0
Aqoxy6G02321 Aquilegia oxysepala HOM05D002848 ORTHO05D003043 7.4e-06 55.1 136 31.6
COL.COLO4_21931 Corchorus olitorius HOM05D002848 ORTHO05D003043 7.4e-06 55.1 150 28.7
VMungo0251G2011 Vigna mungo HOM05D002848 ORTHO05D003043 7.4e-06 55.1 91 38.5
A06p16060 Brassica napus HOM05D002848 ORTHO05D003043 9.7e-06 54.7 256 27.3
BraA06t24712Z Brassica rapa HOM05D002848 ORTHO05D003043 9.7e-06 54.7 256 27.3
Manes.02G102900 Manihot esculenta HOM05D002848 ORTHO05D003043 9.7e-06 54.7 268 23.9


User provided reference genes

Program Settings