Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.1e-210 735.3 353 100.0
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 2.8e-149 532.3 365 77.5
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.8e-98 362.5 357 55.7
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 1.3e-95 354.0 379 52.8
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 4.6e-88 328.9 385 50.1
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.8e-79 300.4 376 48.4
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 5.0e-74 282.3 353 44.8
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.8e-66 256.1 373 43.4
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 2.1e-56 223.8 405 35.1
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.0e-51 207.2 365 38.1
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.1e-48 197.2 340 36.8
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 3.0e-47 193.4 345 36.5
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 4.0e-47 193.0 322 38.2
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 8.9e-47 191.8 345 37.1
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 2.0e-46 190.7 328 35.7
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 2.6e-46 190.3 328 35.7
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.4e-46 189.9 345 37.1
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 7.5e-46 188.7 327 35.5
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.3e-45 188.0 328 35.4
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 6.3e-45 185.7 315 36.2
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 8.3e-45 185.3 339 33.6
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 1.1e-44 184.9 340 35.6
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 2.4e-44 183.7 328 35.4
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 3.1e-44 183.3 328 35.4
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 5.4e-44 182.6 325 35.4
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 1.2e-43 181.4 315 35.2
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 1.2e-43 181.4 328 36.0
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 1.6e-43 181.0 315 35.6
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 2.7e-43 180.3 315 35.6
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 3.5e-43 179.9 315 34.9
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 5.9e-43 179.1 328 33.5
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 7.8e-43 178.7 327 33.9
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.3e-42 177.2 315 35.6
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 8.6e-42 175.3 315 35.2
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 1.5e-41 174.5 327 33.6
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 1.5e-41 174.5 369 36.9
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 2.5e-41 173.7 315 35.2
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 2.5e-41 173.7 315 34.6
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 3.3e-41 173.3 328 33.2
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 3.3e-41 173.3 328 32.9
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 4.3e-41 172.9 328 34.1
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 4.3e-41 172.9 332 32.8
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 9.5e-41 171.8 315 34.3
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 9.5e-41 171.8 326 34.0
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 9.5e-41 171.8 328 35.1
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.6e-40 171.0 270 38.1
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 2.8e-40 170.2 315 33.7
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 8.0e-40 168.7 329 33.4
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 1.0e-39 168.3 332 33.1
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.0e-39 168.3 329 33.1
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 1.8e-39 167.5 340 31.2
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 1.8e-39 167.5 328 33.8
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 4.0e-39 166.4 315 34.3
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 4.0e-39 166.4 352 31.0
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 5.2e-39 166.0 315 34.3
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 6.8e-39 165.6 333 32.4
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 2.0e-38 164.1 315 33.3
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 2.0e-38 164.1 338 32.2
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 2.6e-38 163.7 315 33.3
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 3.4e-38 163.3 315 34.0
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 7.5e-38 162.2 306 34.3
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 1.3e-37 161.4 315 33.3
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 2.9e-37 160.2 315 33.0
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 3.7e-37 159.8 315 32.4
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.7e-37 159.8 106 69.8
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 8.3e-37 158.7 315 33.0
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.8e-36 157.5 314 34.4
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 5.4e-36 156.0 306 34.6
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 1.2e-35 154.8 328 31.4
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 1.6e-35 154.5 345 31.6
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 2.0e-35 154.1 345 31.9
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 2.7e-35 153.7 303 34.0
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 3.5e-35 153.3 381 31.2
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 3.5e-35 153.3 274 33.9
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 6.0e-35 152.5 323 32.8
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 7.8e-35 152.1 315 31.4
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 1.0e-34 151.8 315 32.7
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 1.0e-34 151.8 315 32.4
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 1.7e-34 151.0 338 31.1
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 1.7e-34 151.0 372 31.2
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 3.9e-34 149.8 345 31.3
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 1.5e-33 147.9 315 32.7
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 3.6e-32 143.3 322 30.7
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 1.4e-31 141.4 278 34.9
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.0e-30 137.5 327 29.7
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.6e-30 137.1 309 30.7
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 4.4e-30 136.3 292 31.5
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 4.4e-30 136.3 210 37.1
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 2.2e-29 134.0 298 32.9
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 8.3e-29 132.1 328 29.9
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 2.3e-26 124.0 317 27.4
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 3.0e-26 123.6 248 32.3
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 3.9e-26 123.2 171 39.2
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 3.6e-24 116.7 232 31.0
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 6.2e-24 115.9 314 28.0
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 4.4e-22 109.8 322 28.6
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 1.3e-21 108.2 280 28.2
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 2.9e-21 107.1 314 26.4
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 4.9e-21 106.3 345 26.7
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 6.4e-21 105.9 161 38.5
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 6.4e-21 105.9 287 28.2
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 3.2e-20 103.6 160 37.5
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.7e-18 97.8 136 39.0
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.0e-18 97.1 270 30.0
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 8.1e-16 89.0 399 23.1
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.4e-15 88.2 113 39.8
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.4e-15 88.2 104 51.0
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 2.6e-14 84.0 183 33.3
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 4.4e-14 83.2 310 24.8
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.9e-13 80.5 191 31.4
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 3.2e-12 77.0 451 23.1
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 1.7e-10 71.2 191 29.3
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 5.6e-09 66.2 95 43.2
Solyc02g062200.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.1e-07 60.5 51 45.1
Sopen02g012660 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-07 60.1 38 73.7
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 4.4e-06 56.6 87 41.4


User provided reference genes

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