Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 4.5e-55 217.6 106 100.0
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 3.4e-34 148.3 83 83.1
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 7.5e-34 147.1 83 83.1
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 3.2e-32 141.7 83 78.3
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 1.7e-30 136.0 109 64.2
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 4.0e-27 124.8 109 57.8
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 4.0e-27 124.8 109 56.9
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 4.0e-27 124.8 109 56.9
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 1.2e-26 123.2 109 54.1
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 1.2e-26 123.2 109 56.9
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 2.6e-26 122.1 109 56.0
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 2.6e-26 122.1 109 56.9
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 2.6e-26 122.1 109 55.0
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 3.4e-26 121.7 109 54.1
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 5.8e-26 120.9 109 53.2
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 5.8e-26 120.9 109 56.9
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 5.8e-26 120.9 109 56.0
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 5.8e-26 120.9 109 56.0
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 5.8e-26 120.9 109 54.1
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 7.5e-26 120.6 109 54.1
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 7.5e-26 120.6 109 56.0
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 9.8e-26 120.2 109 53.2
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 9.8e-26 120.2 109 53.2
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 9.8e-26 120.2 109 53.2
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 1.3e-25 119.8 109 55.0
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 1.7e-25 119.4 109 55.0
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 2.2e-25 119.0 109 56.0
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.2e-25 119.0 109 54.1
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 2.2e-25 119.0 109 54.1
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 3.7e-25 118.2 109 53.2
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 3.7e-25 118.2 109 54.1
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 3.7e-25 118.2 109 54.1
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 3.7e-25 118.2 109 54.1
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 3.7e-25 118.2 109 54.1
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 3.7e-25 118.2 109 55.0
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 3.7e-25 118.2 109 54.1
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 4.9e-25 117.9 109 52.3
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 4.9e-25 117.9 109 53.2
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 4.9e-25 117.9 109 54.1
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 4.9e-25 117.9 109 54.1
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 4.9e-25 117.9 109 55.0
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 6.4e-25 117.5 109 54.1
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 6.4e-25 117.5 109 55.0
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 6.4e-25 117.5 109 54.1
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 8.3e-25 117.1 109 54.1
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 8.3e-25 117.1 109 54.1
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 8.3e-25 117.1 109 54.1
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 8.3e-25 117.1 109 54.1
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 1.1e-24 116.7 109 53.2
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 1.1e-24 116.7 108 54.6
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 1.4e-24 116.3 109 53.2
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 1.4e-24 116.3 109 54.1
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 1.4e-24 116.3 109 54.1
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 1.4e-24 116.3 109 53.2
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 1.4e-24 116.3 109 55.0
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 1.4e-24 116.3 109 55.0
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 1.9e-24 115.9 109 54.1
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 2.4e-24 115.5 109 52.3
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 2.4e-24 115.5 109 52.3
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 2.4e-24 115.5 109 52.3
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 2.4e-24 115.5 109 52.3
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 2.4e-24 115.5 109 52.3
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 3.2e-24 115.2 109 54.1
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 3.2e-24 115.2 109 54.1
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 3.2e-24 115.2 109 54.1
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 3.2e-24 115.2 109 54.1
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 5.4e-24 114.4 109 52.3
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 5.4e-24 114.4 109 51.4
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 7.0e-24 114.0 109 52.3
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 7.0e-24 114.0 112 51.8
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 9.2e-24 113.6 109 53.2
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 9.2e-24 113.6 109 53.2
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 9.2e-24 113.6 109 53.2
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 1.2e-23 113.2 109 51.4
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 1.6e-23 112.8 109 53.2
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 2.0e-23 112.5 109 51.4
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 2.0e-23 112.5 109 51.4
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 2.0e-23 112.5 109 51.4
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 2.0e-23 112.5 109 51.4
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.7e-23 112.1 109 50.5
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 6.0e-23 110.9 109 52.3
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 7.8e-23 110.5 109 51.4
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 1.0e-22 110.2 139 43.9
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 1.3e-22 109.8 109 52.3
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 3.9e-22 108.2 93 58.1
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 2.1e-20 102.4 112 44.6
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 4.7e-20 101.3 109 49.5
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 1.1e-19 100.1 142 41.5
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 1.1e-19 100.1 112 44.6
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 3.1e-19 98.6 112 45.5
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 9.8e-18 93.6 115 45.2
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 1.7e-17 92.8 109 44.0
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 1.7e-17 92.8 46 89.1
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 2.2e-17 92.4 95 51.6
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 5.4e-16 87.8 101 46.5
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 5.6e-13 77.8 83 49.4
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 2.0e-10 69.3 39 82.1
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 2.6e-10 68.9 44 63.6
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 1.3e-09 66.6 39 74.4
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 2.2e-09 65.9 45 68.9
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 3.5e-07 58.5 124 29.0
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 4.6e-07 58.2 39 66.7
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 6.6e-06 54.3 39 59.0


User provided reference genes

Program Settings