Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 2.7e-115 418.7 211 100.0
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 4.7e-112 407.9 211 98.1
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 8.0e-112 407.1 211 97.6
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 3.9e-106 388.3 211 93.4
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 1.5e-97 359.8 208 86.5
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 2.0e-86 322.8 209 80.9
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 1.2e-78 297.0 209 74.6
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 6.6e-66 254.6 179 76.0
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 9.6e-65 250.8 140 92.9
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 1.6e-64 250.0 209 65.6
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 8.1e-64 247.7 181 69.6
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 3.1e-63 245.7 172 72.1
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 3.4e-62 242.3 206 64.1
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 9.9e-62 240.7 193 63.2
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 1.7e-61 240.0 166 70.5
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 2.2e-61 239.6 188 65.4
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 2.2e-61 239.6 159 72.3
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 2.9e-61 239.2 214 60.7
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 6.4e-61 238.0 173 69.4
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 6.4e-61 238.0 183 69.4
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 8.4e-61 237.7 149 79.9
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 8.4e-61 237.7 175 70.9
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 3.2e-60 235.7 197 65.0
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 4.2e-60 235.3 197 64.5
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 7.1e-60 234.6 168 68.5
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 7.1e-60 234.6 149 79.2
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 1.2e-59 233.8 172 70.3
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 1.2e-59 233.8 208 60.1
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 2.7e-59 232.6 189 64.0
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 3.5e-59 232.3 158 70.9
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 3.5e-59 232.3 207 57.5
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 6.0e-59 231.5 153 74.5
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 6.0e-59 231.5 153 74.5
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 7.9e-59 231.1 203 60.6
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 3.9e-58 228.8 149 73.2
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 5.1e-58 228.4 149 73.2
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 6.7e-58 228.0 149 72.5
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.1e-57 227.3 143 76.2
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 1.5e-57 226.9 183 63.9
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 1.5e-57 226.9 155 72.3
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 1.5e-57 226.9 179 65.4
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 3.3e-57 225.7 177 65.0
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 9.6e-57 224.2 146 74.7
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 2.8e-56 222.6 166 68.1
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 4.8e-56 221.9 210 55.7
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 8.1e-56 221.1 212 55.2
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 8.1e-56 221.1 170 64.7
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 8.1e-56 221.1 168 67.3
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 8.1e-56 221.1 193 59.6
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 1.4e-55 220.3 172 64.5
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 3.1e-55 219.2 208 55.3
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 3.1e-55 219.2 208 55.8
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 5.3e-55 218.4 148 70.3
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 6.9e-55 218.0 150 70.7
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 6.9e-55 218.0 190 58.4
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 6.9e-55 218.0 147 69.4
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 6.9e-55 218.0 157 67.5
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 1.2e-54 217.2 180 61.7
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 7.6e-54 214.5 171 64.3
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 1.3e-53 213.8 186 57.5
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 1.3e-53 213.8 170 61.8
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 4.9e-53 211.8 186 57.5
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 6.5e-53 211.5 178 59.0
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 1.4e-52 210.3 215 52.1
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 5.5e-52 208.4 188 55.9
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 7.1e-52 208.0 148 66.9
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 9.3e-52 207.6 164 64.0
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 1.2e-51 207.2 175 59.4
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.1e-51 206.5 169 62.7
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 4.6e-51 205.3 176 61.4
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 7.9e-51 204.5 173 60.7
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 1.0e-50 204.1 177 57.1
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 1.0e-50 204.1 170 64.7
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.0e-50 204.1 169 61.5
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.0e-50 204.1 169 61.5
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 1.0e-50 204.1 216 55.6
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.3e-50 203.0 169 60.9
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 2.3e-50 203.0 148 64.2
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 1.1e-49 200.7 213 51.2
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 7.4e-49 198.0 226 50.0
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 6.2e-48 194.9 159 61.6
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 5.3e-47 191.8 213 50.7
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 9.0e-47 191.0 148 64.2
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 9.0e-47 191.0 153 60.1
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 4.5e-46 188.7 154 63.6
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 5.0e-45 185.3 184 57.6
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 3.2e-44 182.6 152 61.8
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 6.1e-43 178.3 216 48.6
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 1.8e-42 176.8 133 66.9
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 8.2e-40 167.9 151 53.0
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 8.2e-40 167.9 151 53.0
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 8.2e-40 167.9 142 62.0
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 1.5e-38 163.7 111 69.4
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.1e-36 157.5 199 43.7
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 9.7e-33 144.4 150 49.3
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 2.0e-30 136.7 90 73.3
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 3.6e-27 125.9 146 42.5
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 4.8e-24 115.5 109 55.0
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 2.9e-21 106.3 181 34.3
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 1.6e-19 100.5 113 46.9
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 8.8e-18 94.7 97 53.6
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.1e-15 87.8 183 36.1
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.4e-15 87.4 186 33.3
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 9.1e-15 84.7 169 26.0
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 3.8e-13 79.3 143 35.0
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 9.4e-12 74.7 77 51.9
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 1.8e-10 70.5 51 68.6
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 4.4e-09 65.9 122 25.4
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 2.2e-08 63.5 47 61.7
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.6e-06 57.4 68 39.7


User provided reference genes

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