Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g031990.1 Solanum lycopersicum HOM05D003807 ORTHO05D002847 4.7e-100 367.9 183 100.0
PGSC0003DMG400014938 Solanum tuberosum HOM05D003807 ORTHO05D002847 2.0e-71 272.7 199 80.4
Sopen02g010250 Solanum pennellii HOM05D003807 ORTHO05D002847 9.5e-69 263.8 137 97.8
Nitab4.5_0002305g0070 Nicotiana tabacum HOM05D003807 ORTHO05D002847 3.1e-43 179.1 202 57.9
Nitab4.5_0000138g0140 Nicotiana tabacum HOM05D003807 ORTHO05D002847 3.8e-41 172.2 193 58.5
Peaxi162Scf00198g00104 Petunia axillaris HOM05D003807 ORTHO05D002847 2.3e-38 162.9 200 55.0
Peaxi162Scf00556g00041 Petunia axillaris HOM05D003807 ORTHO05D002847 3.9e-38 162.2 199 55.3
Nitab4.5_0000443g0160 Nicotiana tabacum HOM05D003807 ORTHO05D002847 2.6e-34 149.4 210 52.4
Nitab4.5_0008965g0010 Nicotiana tabacum HOM05D003807 ORTHO05D002847 8.4e-33 144.4 215 49.3
Peaxi162Scf00199g00093 Petunia axillaris HOM05D003807 ORTHO05D002847 1.3e-30 137.1 204 49.0
PGSC0003DMG400009434 Solanum tuberosum HOM05D003807 ORTHO05D002847 2.3e-22 109.8 167 49.1
Peaxi162Scf00876g00004 Petunia axillaris HOM05D003807 ORTHO05D002847 6.7e-22 108.2 135 55.6
Peaxi162Scf01809g00001 Petunia axillaris HOM05D003807 ORTHO05D002847 6.7e-22 108.2 135 55.6
Sopen02g017610 Solanum pennellii HOM05D003807 ORTHO05D002847 5.6e-21 105.1 125 52.0
Nitab4.5_0008708g0020 Nicotiana tabacum HOM05D003807 ORTHO05D002847 3.5e-15 85.9 129 48.8
Manes.03G074500 Manihot esculenta HOM05D003807 ORTHO05D002847 1.0e-14 84.3 115 51.3
Duzib248G0332 Durio zibethinus HOM05D003807 ORTHO05D002847 2.3e-14 83.2 139 43.9
DCAR_001286 Daucus carota HOM05D003807 ORTHO05D002847 3.9e-14 82.4 174 36.2
Nitab4.5_0000443g0140 Nicotiana tabacum HOM05D003807 ORTHO05D002847 5.1e-14 82.0 120 47.5
Prupe.4G116000 Prunus persica HOM05D003807 ORTHO05D002847 5.1e-14 82.0 131 45.8
QL11p012767 Quercus lobata HOM05D003807 ORTHO05D002847 6.7e-14 81.6 95 52.6
CiPaw.09G073700 Carya illinoinensis HOM05D003807 ORTHO05D002847 1.5e-13 80.5 131 42.7
Glyma.15G158200 Glycine max HOM05D003807 ORTHO05D002847 1.5e-13 80.5 133 47.4
Gohir.A12G048200 Gossypium hirsutum HOM05D003807 ORTHO05D002847 1.5e-13 80.5 79 58.2
Peaxi162Scf00199g00915 Petunia axillaris HOM05D003807 ORTHO05D002847 1.5e-13 80.5 117 47.0
CAN.G1299.6 Capsicum annuum HOM05D003807 ORTHO05D002847 1.9e-13 80.1 147 42.2
Medtr2g035850 Medicago truncatula HOM05D003807 ORTHO05D002847 4.3e-13 79.0 137 44.5
Solyc02g068460.1 Solanum lycopersicum HOM05D003807 ORTHO05D002847 4.3e-13 79.0 108 49.1
Gohir.D12G047000 Gossypium hirsutum HOM05D003807 ORTHO05D002847 7.4e-13 78.2 83 54.2
Gorai.008G049600 Gossypium raimondii HOM05D003807 ORTHO05D002847 7.4e-13 78.2 83 54.2
CANSAT35G1226 Cannabis sativa HOM05D003807 ORTHO05D002847 9.7e-13 77.8 140 42.1
Thecc.02G005500 Theobroma cacao HOM05D003807 ORTHO05D002847 9.7e-13 77.8 138 41.3
Sopen02g017600 Solanum pennellii HOM05D003807 ORTHO05D002847 1.3e-12 77.4 112 46.4
Cfa000664 Carpinus fangiana HOM05D003807 ORTHO05D002847 1.6e-12 77.0 146 40.4
Haze_06156 Corylus avellana HOM05D003807 ORTHO05D002847 1.6e-12 77.0 137 42.3
Dinv31174 Davidia involucrata HOM05D003807 ORTHO05D002847 1.6e-12 77.0 81 53.1
PGSC0003DMG400009442 Solanum tuberosum HOM05D003807 ORTHO05D002847 1.6e-12 77.0 105 45.7
Atru.chr10.409 Acer truncatum HOM05D003807 ORTHO05D002847 2.2e-12 76.6 66 60.6
Duzib132G0260 Durio zibethinus HOM05D003807 ORTHO05D002847 2.8e-12 76.3 139 41.0
RcHm_v2.0_Chr5g0020711 Rosa chinensis HOM05D003807 ORTHO05D002847 2.8e-12 76.3 123 47.2
Sabra01G0133000 Salix brachista HOM05D003807 ORTHO05D002847 2.8e-12 76.3 110 46.4
Potri.001G158800 Populus trichocarpa HOM05D003807 ORTHO05D002847 4.8e-12 75.5 133 42.9
FvH4_3g12720 Fragaria vesca HOM05D003807 ORTHO05D002847 6.3e-12 75.1 110 47.3
FAN11G1675 Fragaria x ananassa HOM05D003807 ORTHO05D002847 6.3e-12 75.1 110 47.3
TPR.G31858 Trifolium pratense HOM05D003807 ORTHO05D002847 6.3e-12 75.1 148 43.2
TWI63G0470 Tripterygium wilfordii HOM05D003807 ORTHO05D002847 1.8e-11 73.6 160 36.9
Psat1g149760 Pisum sativum HOM05D003807 ORTHO05D002847 2.4e-11 73.2 134 40.3
Haze_06157 Corylus avellana HOM05D003807 ORTHO05D002847 3.1e-11 72.8 147 40.1
TWI38G0220 Tripterygium wilfordii HOM05D003807 ORTHO05D002847 3.1e-11 72.8 120 44.2
VMungo1309G0233 Vigna mungo HOM05D003807 ORTHO05D002847 3.1e-11 72.8 175 37.1
Ca_01992_v3 Cicer arietinum L. HOM05D003807 ORTHO05D002847 4.1e-11 72.4 151 38.4
SalBow8G4256 Salvia bowleyana HOM05D003807 ORTHO05D002847 5.3e-11 72.0 71 53.5
FAN25G3700 Fragaria x ananassa HOM05D003807 ORTHO05D002847 6.9e-11 71.6 144 40.3
FAN16G0324 Fragaria x ananassa HOM05D003807 ORTHO05D002847 9.0e-11 71.2 127 44.1
Oeu008729.1 Olea europaea HOM05D003807 ORTHO05D002847 9.0e-11 71.2 60 65.0
Lj1P1147T18 Lonicera japonica HOM05D003807 ORTHO05D002847 1.2e-10 70.9 87 46.0
Sabra03G0046300 Salix brachista HOM05D003807 ORTHO05D002847 1.2e-10 70.9 139 41.7
Potri.003G075800 Populus trichocarpa HOM05D003807 ORTHO05D002847 1.5e-10 70.5 122 43.4
CiPaw.10G062400 Carya illinoinensis HOM05D003807 ORTHO05D002847 2.0e-10 70.1 147 38.1
Ciclev10016595m.g Citrus clementina HOM05D003807 ORTHO05D002847 2.0e-10 70.1 85 50.6
Lalb_Chr15g0083801 Lupinus albus HOM05D003807 ORTHO05D002847 2.0e-10 70.1 70 51.4
Cpa.g.sc30.131 Carica papaya HOM05D003807 ORTHO05D002847 3.4e-10 69.3 70 55.7
FAN21G0474 Fragaria x ananassa HOM05D003807 ORTHO05D002847 3.4e-10 69.3 106 47.2
Actinidia22425 Actinidia chinensis HOM05D003807 ORTHO05D002847 4.5e-10 68.9 109 40.4
CiPaw.10G062300 Carya illinoinensis HOM05D003807 ORTHO05D002847 4.5e-10 68.9 147 38.1
Medtr4g094698 Medicago truncatula HOM05D003807 ORTHO05D002847 4.5e-10 68.9 106 43.4
Thecc.02G005300 Theobroma cacao HOM05D003807 ORTHO05D002847 4.5e-10 68.9 111 41.4
DCAR_004339 Daucus carota HOM05D003807 ORTHO05D002847 5.9e-10 68.6 82 47.6
Duzib248G1013 Durio zibethinus HOM05D003807 ORTHO05D002847 5.9e-10 68.6 60 53.3
MELO3C007028.2 Cucumis melo HOM05D003807 ORTHO05D002847 7.7e-10 68.2 63 58.7
DCAR_024218 Daucus carota HOM05D003807 ORTHO05D002847 7.7e-10 68.2 82 47.6
PGR004G1269 Punica granatum HOM05D003807 ORTHO05D002847 7.7e-10 68.2 133 38.3
Migut.M02002 Erythranthe guttata HOM05D003807 ORTHO05D002847 1.3e-09 67.4 106 39.6
Oeu041444.1 Olea europaea HOM05D003807 ORTHO05D002847 1.3e-09 67.4 124 38.7
TPR.G31240 Trifolium pratense HOM05D003807 ORTHO05D002847 1.3e-09 67.4 121 39.7
Lalb_Chr18g0052151 Lupinus albus HOM05D003807 ORTHO05D002847 1.7e-09 67.0 56 60.7
Oeu046931.1 Olea europaea HOM05D003807 ORTHO05D002847 1.7e-09 67.0 120 38.3
Sc05g0004730 Simmondsia chinensis HOM05D003807 ORTHO05D002847 1.7e-09 67.0 74 48.6
SGA_v2.0_scaffold175G39345 Striga asiatica HOM05D003807 ORTHO05D002847 2.2e-09 66.6 91 47.3
Oeu003076.1 Olea europaea HOM05D001711 ORTHO05D002847 1.4e-08 63.9 94 42.6
Sopen07g022830 Solanum pennellii HOM05D003807 ORTHO05D002847 1.4e-08 63.9 101 41.6
Duzib132G1175 Durio zibethinus HOM05D003807 ORTHO05D002847 1.9e-08 63.5 142 38.7
Eucgr.D00026 Eucalyptus grandis HOM05D003807 ORTHO05D002847 1.9e-08 63.5 129 38.8
Phvul.009G241900 Phaseolus vulgaris HOM05D003807 ORTHO05D002847 1.9e-08 63.5 171 36.3
ClCG01G025570 Citrullus lanatus HOM05D003807 ORTHO05D002847 2.5e-08 63.2 92 43.5
Eucgr.K01342 Eucalyptus grandis HOM05D001711 ORTHO05D002847 3.2e-08 62.8 84 46.4
Lalb_Chr12g0208981 Lupinus albus HOM05D003807 ORTHO05D002847 3.2e-08 62.8 141 38.3
Oeu052638.1 Olea europaea HOM05D003807 ORTHO05D002847 4.2e-08 62.4 75 45.3
Sed0023526 Sechium edule HOM05D003807 ORTHO05D002847 4.2e-08 62.4 66 54.5
PGSC0003DMG400011745 Solanum tuberosum HOM05D003807 ORTHO05D002847 4.2e-08 62.4 101 41.6
Glyma.08G087400 Glycine max HOM05D003807 ORTHO05D002847 5.5e-08 62.0 78 48.7
TWI60G0522 Tripterygium wilfordii HOM05D001711 ORTHO05D002847 5.5e-08 62.0 72 51.4
arahy.Tifrunner.gnm1.ann1.H0VTBF Arachis hypogaea HOM05D003807 ORTHO05D002847 7.2e-08 61.6 58 51.7
COL.COLO4_17627 Corchorus olitorius HOM05D003807 ORTHO05D002847 7.2e-08 61.6 108 37.0
Glyma.09G051900 Glycine max HOM05D003807 ORTHO05D002847 7.2e-08 61.6 141 40.4
TAR626G1107 Trochodendron aralioides HOM05D001711 ORTHO05D002847 7.2e-08 61.6 93 43.0
VMungo0251G2884 Vigna mungo HOM05D003807 ORTHO05D002847 7.2e-08 61.6 59 57.6
RcHm_v2.0_Chr2g0153531 Rosa chinensis HOM05D003807 ORTHO05D002847 9.4e-08 61.2 54 59.3
CAN.G182.24 Capsicum annuum HOM05D001711 ORTHO05D002847 1.2e-07 60.8 95 38.9
Glyma.05G133000 Glycine max HOM05D003807 ORTHO05D002847 1.2e-07 60.8 81 45.7
Gohir.A12G048100 Gossypium hirsutum HOM05D003807 ORTHO05D002847 1.2e-07 60.8 109 40.4
Nitab4.5_0002232g0070 Nicotiana tabacum HOM05D003807 ORTHO05D002847 1.2e-07 60.8 81 46.9
Gohir.D12G046900 Gossypium hirsutum HOM05D003807 ORTHO05D002847 1.6e-07 60.5 136 36.0
Hma1.2p1_0088F.1_g045023 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 1.6e-07 60.5 96 42.7
Hma1.2p1_0088F.1_g045030 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 1.6e-07 60.5 96 42.7
Phvul.002G189900 Phaseolus vulgaris HOM05D003807 ORTHO05D002847 1.6e-07 60.5 95 41.1
Sed0022416 Sechium edule HOM05D003807 ORTHO05D002847 1.6e-07 60.5 56 55.4
Gorai.008G049400 Gossypium raimondii HOM05D003807 ORTHO05D002847 2.1e-07 60.1 136 36.0
CANSAT64G0062 Cannabis sativa HOM05D001711 ORTHO05D002847 2.7e-07 59.7 43 67.4
Cfa022497 Carpinus fangiana HOM05D001711 ORTHO05D002847 2.7e-07 59.7 134 38.1
Lsat_1_v5_gn_6_111360 Lactuca sativa HOM05D055215 ORTHO05D002847 2.7e-07 59.7 105 34.3
TWI32G0059 Tripterygium wilfordii HOM05D003807 ORTHO05D002847 2.7e-07 59.7 43 65.1
Aa31LG9G2270 Aethionema arabicum HOM05D003807 ORTHO05D002847 4.6e-07 58.9 61 52.5
Cpa.g.sc30.129 Carica papaya HOM05D003807 ORTHO05D002847 6.1e-07 58.5 59 55.9
CiPaw.04G072500 Carya illinoinensis HOM05D001711 ORTHO05D002847 6.1e-07 58.5 79 44.3
Haze_13646 Corylus avellana HOM05D001711 ORTHO05D002847 6.1e-07 58.5 94 46.8
LjContig00081g0007494 Lotus japonicus HOM05D001711 ORTHO05D002847 6.1e-07 58.5 55 56.4
Solyc07g043250.1 Solanum lycopersicum HOM05D003807 ORTHO05D002847 6.1e-07 58.5 79 43.0
BcaNung00304 Brassica carinata HOM05D003807 ORTHO05D002847 7.9e-07 58.2 54 57.4
Sc07g0001950 Simmondsia chinensis HOM05D001711 ORTHO05D002847 7.9e-07 58.2 84 50.0
SGA_v2.0_scaffold175G39346 Striga asiatica HOM05D003807 ORTHO05D002847 7.9e-07 58.2 59 49.2
Glyma.14G002800 Glycine max HOM05D001711 ORTHO05D002847 1.0e-06 57.8 95 42.1
Ca_16315_v3 Cicer arietinum L. HOM05D001711 ORTHO05D002847 1.4e-06 57.4 111 38.7
Nn7g38292 Nelumbo nucifera HOM05D001711 ORTHO05D002847 1.4e-06 57.4 60 50.0
Oeu052639.1 Olea europaea HOM05D003807 ORTHO05D002847 1.4e-06 57.4 159 32.1
AL3G36350 Arabidopsis lyrata HOM05D003807 ORTHO05D002847 1.8e-06 57.0 75 48.0
AT3G22160 Arabidopsis thaliana HOM05D003807 ORTHO05D002847 1.8e-06 57.0 75 48.0
Carub.0003s2233 Capsella rubella HOM05D003807 ORTHO05D002847 1.8e-06 57.0 75 48.0
A01p22390 Brassica napus HOM05D003807 ORTHO05D002847 2.3e-06 56.6 98 41.8
Duzib211G0113 Durio zibethinus HOM05D001711 ORTHO05D002847 2.3e-06 56.6 112 37.5
Gohir.D11G162700 Gossypium hirsutum HOM05D001711 ORTHO05D002847 2.3e-06 56.6 80 43.8
Gorai.007G173300 Gossypium raimondii HOM05D001711 ORTHO05D002847 2.3e-06 56.6 80 43.8
Hma1.2p1_0088F.1_g045026 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 2.3e-06 56.6 78 47.4
Hma1.2p1_0088F.1_g045040 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 2.3e-06 56.6 78 47.4
AT4G15120 Arabidopsis thaliana HOM05D003807 ORTHO05D002847 3.0e-06 56.2 74 48.6
BraA05t21543Z Brassica rapa HOM05D003807 ORTHO05D002847 3.0e-06 56.2 72 47.2
Gohir.A11G155800 Gossypium hirsutum HOM05D001711 ORTHO05D002847 3.0e-06 56.2 71 47.9
TAR627G0259 Trochodendron aralioides HOM05D003807 ORTHO05D002847 3.0e-06 56.2 93 39.8
VMungo0540G2275 Vigna mungo HOM05D001711 ORTHO05D002847 3.0e-06 56.2 76 43.4
CiPaw.03G111200 Carya illinoinensis HOM05D001711 ORTHO05D002847 3.9e-06 55.8 93 39.8
MELO3C016231.2 Cucumis melo HOM05D001711 ORTHO05D002847 3.9e-06 55.8 117 37.6
Migut.M00092 Erythranthe guttata HOM05D001711 ORTHO05D002847 3.9e-06 55.8 51 56.9
Medtr3g081500 Medicago truncatula HOM05D001711 ORTHO05D002847 3.9e-06 55.8 87 40.2
BcaC09g49150 Brassica carinata HOM05D003807 ORTHO05D002847 5.1e-06 55.5 72 45.8
A01p33000 Brassica napus HOM05D003807 ORTHO05D002847 5.1e-06 55.5 72 45.8
C01p42110 Brassica napus HOM05D003807 ORTHO05D002847 5.1e-06 55.5 72 45.8
BolC1t04173H Brassica oleracea HOM05D003807 ORTHO05D002847 5.1e-06 55.5 72 45.8
BraA01t03420Z Brassica rapa HOM05D003807 ORTHO05D002847 5.1e-06 55.5 72 45.8
AUR62003537 Chenopodium quinoa HOM05D001711 ORTHO05D002847 5.1e-06 55.5 73 46.6
CsaV3_4G007280 Cucumis sativus L. HOM05D001711 ORTHO05D002847 5.1e-06 55.5 132 36.4
Thhalv10026244m.g Eutrema salsugineum HOM05D009858 ORTHO05D011870 5.1e-06 55.5 94 42.6
Sabra16G0020100 Salix brachista HOM05D001711 ORTHO05D002847 5.1e-06 55.5 40 62.5
TPR.G8276 Trifolium pratense HOM05D001711 ORTHO05D002847 5.1e-06 55.5 104 40.4
arahy.Tifrunner.gnm1.ann1.W19YV6 Arachis hypogaea HOM05D001711 ORTHO05D002847 6.7e-06 55.1 35 71.4
BcaB06g26318 Brassica carinata HOM05D003807 ORTHO05D002847 6.7e-06 55.1 72 45.8
BcaC05g28098 Brassica carinata HOM05D003807 ORTHO05D002847 6.7e-06 55.1 72 45.8
C05p41250 Brassica napus HOM05D003807 ORTHO05D002847 6.7e-06 55.1 72 45.8
BolC5t32867H Brassica oleracea HOM05D003807 ORTHO05D002847 6.7e-06 55.1 72 45.8
Lalb_Chr04g0247001 Lupinus albus HOM05D003807 ORTHO05D002847 6.7e-06 55.1 40 65.0
Os02g0173200 Oryza sativa ssp. japonica HOM05D001711 ORTHO05D002847 6.7e-06 55.1 59 52.5
Sp3g19970 Schrenkiella parvula HOM05D003807 ORTHO05D002847 6.7e-06 55.1 72 45.8
Thecc.01G173400 Theobroma cacao HOM05D001711 ORTHO05D002847 6.7e-06 55.1 141 34.0
Phvul.008G290700 Phaseolus vulgaris HOM05D003807 ORTHO05D002847 8.8e-06 54.7 92 42.4


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