Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g031960.3 Solanum lycopersicum HOM05D000131 ORTHO05D025807 2.8e-39 164.9 84 100.0
Sopen02g010220 Solanum pennellii HOM05D000131 ORTHO05D025807 6.1e-39 163.7 84 98.8
Sopen05g003050 Solanum pennellii HOM05D000131 ORTHO05D000086 6.4e-28 127.1 81 76.5
Solyc05g007080.4 Solanum lycopersicum HOM05D000131 ORTHO05D000086 1.9e-27 125.6 81 76.5
PGSC0003DMG402017626 Solanum tuberosum HOM05D000131 ORTHO05D000086 2.4e-27 125.2 81 75.3
Nitab4.5_0000879g0100 Nicotiana tabacum HOM05D000131 ORTHO05D000086 1.8e-22 109.0 71 78.9
Nitab4.5_0010498g0020 Nicotiana tabacum HOM05D000131 ORTHO05D000086 4.0e-22 107.8 71 77.5
Nitab4.5_0000141g0370 Nicotiana tabacum HOM05D000131 ORTHO05D000086 5.1e-17 90.9 83 62.7
Peaxi162Scf00026g02510 Petunia axillaris HOM05D000131 ORTHO05D000086 9.5e-16 86.7 76 56.6
Nitab4.5_0002752g0040 Nicotiana tabacum HOM05D000131 ORTHO05D000086 1.2e-13 79.7 59 61.0
Sopen01g006390 Solanum pennellii HOM05D000131 ORTHO05D000086 1.2e-13 79.7 83 51.8
Solyc01g010740.4 Solanum lycopersicum HOM05D000131 ORTHO05D000086 1.5e-13 79.3 83 51.8
PGSC0003DMG402000859 Solanum tuberosum HOM05D000131 ORTHO05D000086 3.2e-11 71.6 83 48.2
Migut.E00111 Erythranthe guttata HOM05D000131 ORTHO05D000086 9.2e-11 70.1 83 47.0
CSS0025618 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 1.6e-10 69.3 83 45.8
CAN.G700.17 Capsicum annuum HOM05D000131 ORTHO05D000086 2.7e-10 68.6 59 59.3
Oeu040121.1 Olea europaea HOM05D000131 ORTHO05D000086 4.6e-10 67.8 77 46.8
CSS0030050 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 7.8e-10 67.0 74 44.6
CSS0048783 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 7.8e-10 67.0 74 44.6
Migut.L01335 Erythranthe guttata HOM05D000131 ORTHO05D000086 7.8e-10 67.0 74 44.6
Oeu040120.1 Olea europaea HOM05D000131 ORTHO05D021505 1.0e-09 66.6 77 45.5
Cc11_g13410 Coffea canephora HOM05D000131 ORTHO05D000086 1.7e-09 65.9 81 45.7
Oeu000636.1 Olea europaea HOM05D000131 ORTHO05D000086 3.9e-09 64.7 75 41.3
MSTRG.675 Avicennia marina HOM05D000131 ORTHO05D000086 6.6e-09 63.9 71 45.1
Actinidia31184 Actinidia chinensis HOM05D000131 ORTHO05D000086 1.1e-08 63.2 62 50.0
vmacro16330 Vaccinium macrocarpon HOM05D000131 ORTHO05D000086 2.5e-08 62.0 83 41.0
GSVIVG01011348001 Vitis vinifera HOM05D000131 ORTHO05D000086 2.5e-08 62.0 75 44.0
QL03p065544 Quercus lobata HOM05D000131 ORTHO05D000086 3.3e-08 61.6 83 38.6
Thecc.02G354500 Theobroma cacao HOM05D000131 ORTHO05D000086 3.3e-08 61.6 72 47.2
Duzib251G0120 Durio zibethinus HOM05D000131 ORTHO05D000086 5.6e-08 60.8 82 42.7
Rhsim12G0130200 Rhododendron simsii HOM05D000131 ORTHO05D000086 5.6e-08 60.8 75 45.3
MD14G1195200 Malus domestica HOM05D000131 ORTHO05D000086 7.3e-08 60.5 82 41.5
MD14G1195000 Malus domestica HOM05D000131 ORTHO05D025807 9.6e-08 60.1 82 41.5
TAR622G0931 Trochodendron aralioides HOM05D000131 ORTHO05D000086 9.6e-08 60.1 73 43.8
vmacro18209 Vaccinium macrocarpon HOM05D000131 ORTHO05D000086 9.6e-08 60.1 53 54.7
Peaxi162Scf00209g00330 Petunia axillaris HOM05D000131 ORTHO05D000086 1.2e-07 59.7 81 45.7
Eucgr.G02541 Eucalyptus grandis HOM05D000131 ORTHO05D000086 2.8e-07 58.5 77 42.9
Cfa007515 Carpinus fangiana HOM05D000131 ORTHO05D000086 3.6e-07 58.2 67 41.8
DCAR_007134 Daucus carota HOM05D000131 ORTHO05D000086 3.6e-07 58.2 68 42.6
QL02p080671 Quercus lobata HOM05D000131 ORTHO05D000086 3.6e-07 58.2 70 47.1
TAR629G0938 Trochodendron aralioides HOM05D000131 ORTHO05D000086 3.6e-07 58.2 74 45.9
Gohir.A04G148100 Gossypium hirsutum HOM05D000131 ORTHO05D000086 6.2e-07 57.4 71 42.3
SalBow8G1455 Salvia bowleyana HOM05D000131 ORTHO05D000086 6.2e-07 57.4 73 46.6
CiPaw.05G139300 Carya illinoinensis HOM05D000131 ORTHO05D000086 8.1e-07 57.0 78 41.0
CsaV3_1G007900 Cucumis sativus L. HOM05D000131 ORTHO05D000086 8.1e-07 57.0 65 46.2
Rhsim08G0066400 Rhododendron simsii HOM05D000131 ORTHO05D000086 8.1e-07 57.0 71 42.3
Rhsim12G0057600 Rhododendron simsii HOM05D000131 ORTHO05D000086 8.1e-07 57.0 74 44.6
GSVIVG01008053001 Vitis vinifera HOM05D000131 ORTHO05D000086 8.1e-07 57.0 66 43.9
Eucgr.J02132 Eucalyptus grandis HOM05D000131 ORTHO05D000086 1.1e-06 56.6 70 45.7
vmacro16328 Vaccinium macrocarpon HOM05D000131 ORTHO05D025807 1.1e-06 56.6 67 41.8
CSS0005293 Camellia sinensis var. sinensis HOM05D000131 ORTHO05D000086 1.4e-06 56.2 83 38.6
Haze_14580 Corylus avellana HOM05D000131 ORTHO05D000086 1.4e-06 56.2 67 41.8
Thecc.03G080000 Theobroma cacao HOM05D000131 ORTHO05D000086 1.4e-06 56.2 71 45.1
Gohir.D04G192400 Gossypium hirsutum HOM05D000131 ORTHO05D000086 1.8e-06 55.8 67 41.8
Gorai.012G187800 Gossypium raimondii HOM05D000131 ORTHO05D000086 1.8e-06 55.8 67 41.8
Nitab4.5_0000002g0450 Nicotiana tabacum HOM05D000131 ORTHO05D000086 1.8e-06 55.8 72 41.7
vmacro01231 Vaccinium macrocarpon HOM05D000131 ORTHO05D000086 1.8e-06 55.8 72 44.4
CiPaw.03G029700 Carya illinoinensis HOM05D000131 ORTHO05D000086 3.1e-06 55.1 65 44.6
COL.COLO4_25167 Corchorus olitorius HOM05D000131 ORTHO05D000086 3.1e-06 55.1 72 43.1
PGR083G1983 Punica granatum HOM05D000131 ORTHO05D000086 3.1e-06 55.1 72 45.8
CANSAT64G1917 Cannabis sativa HOM05D000131 ORTHO05D000086 4.0e-06 54.7 72 43.1
Duzib084G0038 Durio zibethinus HOM05D000131 ORTHO05D000086 4.0e-06 54.7 67 38.8
Gohir.D01G044600 Gossypium hirsutum HOM05D000131 ORTHO05D000086 4.0e-06 54.7 77 41.6
Gohir.D05G370800 Gossypium hirsutum HOM05D000131 ORTHO05D000086 4.0e-06 54.7 86 40.7
Gorai.002G064100 Gossypium raimondii HOM05D000131 ORTHO05D000086 4.0e-06 54.7 77 41.6
Gorai.009G439300 Gossypium raimondii HOM05D000131 ORTHO05D000086 4.0e-06 54.7 86 40.7
MD06G1188600 Malus domestica HOM05D000131 ORTHO05D000086 4.0e-06 54.7 74 43.2
MD16G1078000 Malus domestica HOM05D000131 ORTHO05D000086 4.0e-06 54.7 78 39.7
MSTRG.2357 Avicennia marina HOM05D000131 ORTHO05D000086 5.2e-06 54.3 82 41.5
Nitab4.5_0005670g0010 Nicotiana tabacum HOM05D000131 ORTHO05D000086 5.2e-06 54.3 87 37.9
Cpa.g.sc17.208 Carica papaya HOM05D000131 ORTHO05D000086 6.9e-06 53.9 71 39.4
Cfa009026 Carpinus fangiana HOM05D000131 ORTHO05D000086 6.9e-06 53.9 84 40.5
CiPaw.06G081100 Carya illinoinensis HOM05D000131 ORTHO05D000086 6.9e-06 53.9 81 39.5
Dinv06517 Davidia involucrata HOM05D000131 ORTHO05D000086 6.9e-06 53.9 81 39.5
SalBow2G2225 Salvia bowleyana HOM05D000131 ORTHO05D000086 6.9e-06 53.9 83 37.3
Duzib187G1451 Durio zibethinus HOM05D000131 ORTHO05D000086 9.0e-06 53.5 62 45.2
Eucgr.G02162 Eucalyptus grandis HOM05D000131 ORTHO05D000086 9.0e-06 53.5 70 40.0


User provided reference genes

Program Settings