Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g030430.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 2.5e-75 285.4 148 100.0
CAN.G464.34 Capsicum annuum HOM05D001338 ORTHO05D001239 1.2e-48 196.8 141 75.9
Solyc11g061950.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 3.0e-41 172.2 140 67.9
CAN.G80.8 Capsicum annuum HOM05D001338 ORTHO05D001239 6.6e-36 154.5 120 68.3
CSS0007608 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 8.6e-36 154.1 140 57.9
Oeu046624.1 Olea europaea HOM05D001338 ORTHO05D001239 1.9e-35 152.9 137 57.7
Oeu018627.1 Olea europaea HOM05D001338 ORTHO05D001239 1.6e-34 149.8 141 56.7
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.8e-34 149.1 141 53.9
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.8e-34 149.1 141 53.9
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.8e-34 149.1 141 53.9
TWI18G1324 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.1e-34 147.9 141 53.9
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.4e-33 146.7 141 53.2
Oeu019879.2 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-33 146.0 140 56.4
CANSAT01G1407 Cannabis sativa HOM05D001338 ORTHO05D001239 1.7e-31 139.8 140 50.7
CANSAT80G1687 Cannabis sativa HOM05D001338 ORTHO05D001239 4.9e-31 138.3 140 50.7
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 4.9e-31 138.3 141 53.2
Aqoxy7G02176 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 1.1e-30 137.1 141 49.6
Oeu064199.1 Olea europaea HOM05D001338 ORTHO05D001239 1.4e-30 136.7 140 53.6
Glyma.18G183000 Glycine max HOM05D001338 ORTHO05D001239 1.9e-30 136.3 136 54.4
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 1.9e-30 136.3 117 61.5
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 3.2e-30 135.6 135 55.6
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 7.0e-30 134.4 140 49.3
CANSAT11G2147 Cannabis sativa HOM05D001338 ORTHO05D001239 9.2e-30 134.0 140 50.0
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 1.2e-29 133.7 140 49.3
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 1.7e-28 129.8 140 47.9
AT3G29794 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 3.9e-28 128.6 144 48.6
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 3.9e-28 128.6 140 46.4
FvH4_4g14421 Fragaria vesca HOM05D001338 ORTHO05D001239 6.6e-28 127.9 140 47.9
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 8.6e-28 127.5 141 49.6
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 1.1e-27 127.1 142 47.9
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 1.5e-27 126.7 144 50.0
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-27 126.3 143 47.6
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 5.6e-27 124.8 143 46.9
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-26 122.9 143 46.2
PSO832G0537 Papaver somniferum HOM05D001338 ORTHO05D001239 2.8e-26 122.5 143 46.2
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 3.6e-26 122.1 149 44.3
Thhalv10001096m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 4.7e-26 121.7 143 47.6
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 6.2e-26 121.3 139 48.9
PSO144G0154 Papaver somniferum HOM05D001338 ORTHO05D001239 6.2e-26 121.3 143 45.5
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 8.0e-26 120.9 141 46.8
ECA232G4407 Erigeron canadensis HOM05D001338 ORTHO05D001239 8.0e-26 120.9 141 46.8
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 8.0e-26 120.9 141 51.1
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-25 120.6 143 46.2
PSO063G6488 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-25 120.2 143 45.5
PSO384G1406 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-25 120.2 143 44.8
Thhalv10016048m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.8e-25 119.8 143 46.9
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 3.1e-25 119.0 143 49.0
PSO135G0743 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-25 118.6 142 45.1
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-25 118.6 142 45.1
PSO339G3643 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-25 118.6 142 45.1
CSS0012104 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 6.8e-25 117.9 142 49.3
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 8.9e-25 117.5 141 48.9
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 8.9e-25 117.5 141 44.7
PSO339G5336 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-25 117.5 143 44.8
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-25 117.5 142 45.1
CARHR149350 Cardamine hirsuta HOM05D001338 ORTHO05D001239 3.4e-24 115.5 143 44.8
PSO210G1253 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-24 115.5 143 44.8
Glyma.14G186200 Glycine max HOM05D001338 ORTHO05D001239 5.8e-24 114.8 130 50.0
PSO384G2524 Papaver somniferum HOM05D001338 ORTHO05D001239 5.8e-24 114.8 143 42.7
PSO170G3017 Papaver somniferum HOM05D001338 ORTHO05D001239 7.5e-24 114.4 142 43.7
BcaB06g28244 Brassica carinata HOM05D001338 ORTHO05D001239 9.8e-24 114.0 143 45.5
CANSAT56G4418 Cannabis sativa HOM05D001338 ORTHO05D001239 1.3e-23 113.6 140 45.7
FvH4_6g47641 Fragaria vesca HOM05D001338 ORTHO05D001239 2.2e-23 112.8 143 44.8
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 2.9e-23 112.5 103 58.3
Atru.chr1.2432 Acer truncatum HOM05D001338 ORTHO05D001239 4.9e-23 111.7 146 46.6
CAN.G1005.11 Capsicum annuum HOM05D001338 ORTHO05D001239 6.4e-23 111.3 83 71.1
CSS0004687 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.4e-22 109.4 141 47.5
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 3.2e-22 109.0 143 45.5
PSO339G3227 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-22 108.2 143 46.2
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 7.0e-22 107.8 143 44.8
CANSAT35G0841 Cannabis sativa HOM05D001338 ORTHO05D001239 1.2e-21 107.1 115 47.0
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.2e-21 107.1 145 44.8
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-21 106.7 143 44.1
Atru.chr1.2150 Acer truncatum HOM05D002861 ORTHO05D003104 2.1e-21 106.3 134 46.3
CSS0016533 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.1e-21 106.3 132 47.7
PSO675G6439 Papaver somniferum HOM05D001338 ORTHO05D001239 3.5e-21 105.5 143 44.1
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 1.0e-20 104.0 140 42.1
FvH4_2g29241 Fragaria vesca HOM05D001338 ORTHO05D001239 1.3e-20 103.6 117 46.2
CANSAT64G0482 Cannabis sativa HOM05D001338 ORTHO05D001239 1.7e-20 103.2 106 49.1
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.3e-20 102.8 140 42.1
CARHR289900 Cardamine hirsuta HOM05D001338 ORTHO05D001239 2.3e-20 102.8 144 40.3
PSO724G0816 Papaver somniferum HOM05D001338 ORTHO05D001239 3.0e-20 102.4 118 45.8
CANSAT80G1592 Cannabis sativa HOM05D001338 ORTHO05D001239 3.9e-20 102.1 140 42.1
Gorai.010G095100 Gossypium raimondii HOM05D001338 ORTHO05D001239 3.9e-20 102.1 114 53.5
CSS0034678 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 6.6e-20 101.3 142 43.7
Oeu058818.1 Olea europaea HOM05D001338 ORTHO05D001239 8.6e-20 100.9 103 53.4
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.1e-19 100.5 122 45.1
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.5e-19 100.1 140 41.4
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.5e-19 99.4 97 54.6
CSS0025100 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.3e-19 99.0 132 47.0
CSS0029771 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 5.6e-19 98.2 141 44.0
Zm00001eb419880 Zea mays HOM05D001338 ORTHO05D001239 5.6e-19 98.2 141 39.7
PSO782G2771 Papaver somniferum HOM05D001338 ORTHO05D001239 9.5e-19 97.4 116 42.2
PSO675G4854 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-18 96.7 133 39.8
Zm00001eb395890 Zea mays HOM05D001338 ORTHO05D001239 2.1e-18 96.3 117 46.2
CANSAT80G1793 Cannabis sativa HOM05D001338 ORTHO05D001239 4.7e-18 95.1 128 40.6
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 4.7e-18 95.1 102 50.0
PSO339G5254 Papaver somniferum HOM05D001338 ORTHO05D001239 4.7e-18 95.1 140 43.6
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 6.2e-18 94.7 141 39.7
SpUn0007_0210 Schrenkiella parvula HOM05D001338 ORTHO05D001239 8.1e-18 94.4 141 41.1
CiPaw.02G115100 Carya illinoinensis HOM05D001338 ORTHO05D001239 1.4e-17 93.6 113 46.9
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 1.8e-17 93.2 102 49.0
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 6.8e-17 91.3 110 45.5
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 8.9e-17 90.9 100 51.0
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.2e-16 90.5 76 56.6
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 2.0e-16 89.7 101 51.5
CANSAT21G1695 Cannabis sativa HOM05D001338 ORTHO05D001239 7.5e-16 87.8 97 45.4
CANSAT21G1775 Cannabis sativa HOM05D001338 ORTHO05D001239 7.5e-16 87.8 122 43.4
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 7.5e-16 87.8 108 43.5
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 7.5e-16 87.8 141 41.8
Oeu052873.1 Olea europaea HOM05D001338 ORTHO05D001239 9.9e-16 87.4 101 49.5
PSO421G0468 Papaver somniferum HOM05D001338 ORTHO05D001239 9.9e-16 87.4 113 43.4
PSO063G5018 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-15 87.0 113 42.5
Sp6g08540 Schrenkiella parvula HOM05D001338 ORTHO05D001239 3.7e-15 85.5 94 47.9
Oeu006251.1 Olea europaea HOM05D001338 ORTHO05D001239 4.9e-15 85.1 85 51.8
CANSAT21G0346 Cannabis sativa HOM05D001338 ORTHO05D001239 6.4e-15 84.7 95 45.3
Solyc02g024040.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 1.4e-14 83.6 61 75.4
CSS0006616 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.9e-14 83.2 123 39.0
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-14 82.8 107 44.9
Sp5g19890 Schrenkiella parvula HOM05D001338 ORTHO05D001239 3.2e-14 82.4 96 47.9
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 5.4e-14 81.6 110 39.1
SpUn0060_0030 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.2e-13 80.5 112 39.3
CiPaw.15G122600 Carya illinoinensis HOM05D001338 ORTHO05D001239 4.6e-13 78.6 73 53.4
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 6.0e-13 78.2 77 54.5
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 1.0e-12 77.4 99 47.5
Atru.chr10.1126 Acer truncatum HOM05D001338 ORTHO05D001239 1.3e-12 77.0 73 58.9
FvH4_2g18762 Fragaria vesca HOM05D001338 ORTHO05D001239 1.7e-12 76.6 83 49.4
Oeu011870.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-12 76.6 79 51.9
Oeu033602.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-12 76.6 79 50.6
Oeu025048.1 Olea europaea HOM05D001338 ORTHO05D001239 3.0e-12 75.9 92 45.7
Oeu044946.1 Olea europaea HOM05D001338 ORTHO05D001239 3.0e-12 75.9 75 53.3
CSS0026998 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.9e-12 75.5 123 35.8
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 5.1e-12 75.1 81 49.4
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 5.1e-12 75.1 81 49.4
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 5.1e-12 75.1 80 47.5
PSO339G3296 Papaver somniferum HOM05D001338 ORTHO05D001239 8.6e-12 74.3 106 40.6
PSO832G2505 Papaver somniferum HOM05D001338 ORTHO05D001239 8.6e-12 74.3 106 40.6
Oeu029413.1 Olea europaea HOM05D001338 ORTHO05D001239 1.9e-11 73.2 79 50.6
PSO138G0008 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-11 73.2 150 32.7
PSO138G0009 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-11 73.2 150 32.7
Oeu034167.1 Olea europaea HOM05D001338 ORTHO05D001239 2.5e-11 72.8 88 42.0
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 3.3e-11 72.4 70 58.6
Oeu017832.1 Olea europaea HOM05D001338 ORTHO05D001239 3.3e-11 72.4 77 49.4
Oeu035174.1 Olea europaea HOM05D001338 ORTHO05D001239 5.6e-11 71.6 141 34.0
Sp4g06670 Schrenkiella parvula HOM05D001338 ORTHO05D001239 5.6e-11 71.6 101 42.6
AT3G29638 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 7.3e-11 71.2 92 40.2
Oeu027891.1 Olea europaea HOM05D001338 ORTHO05D001239 7.3e-11 71.2 77 48.1
PSO675G4675 Papaver somniferum HOM05D001338 ORTHO05D001239 9.5e-11 70.9 99 39.4
CSS0023742 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.6e-10 68.9 69 47.8
CAN.G105.19 Capsicum annuum HOM05D001338 ORTHO05D001239 3.6e-10 68.9 47 72.3
Oeu018676.2 Olea europaea HOM05D001338 ORTHO05D001239 3.6e-10 68.9 62 56.5
THA.LOC104804542 Tarenaya hassleriana HOM05D001338 ORTHO05D001239 3.6e-10 68.9 82 43.9
ECA233G3047 Erigeron canadensis HOM05D001338 ORTHO05D001239 4.7e-10 68.6 98 39.8
Oeu033724.1 Olea europaea HOM05D001338 ORTHO05D001239 6.2e-10 68.2 68 52.9
PSO210G2267 Papaver somniferum HOM05D001338 ORTHO05D001239 6.2e-10 68.2 147 31.3
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.1e-09 67.4 82 42.7
CSS0039736 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.1e-09 67.4 57 59.6
Oeu034372.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-09 67.4 140 34.3
CARHR184740 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.4e-09 67.0 113 38.9
CSS0011720 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.1e-09 65.9 102 41.2
PSO781G0024 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-09 65.5 93 41.9
Oeu056375.1 Olea europaea HOM05D001338 ORTHO05D001239 6.8e-09 64.7 47 66.0
CANSAT46G0003 Cannabis sativa HOM05D001338 ORTHO05D001239 8.9e-09 64.3 84 41.7
PSO063G5722 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-09 64.3 94 41.5
CANSAT01G0302 Cannabis sativa HOM05D001338 ORTHO05D001239 2.0e-08 63.2 74 43.2
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 2.0e-08 63.2 79 45.6
Sp3g27040 Schrenkiella parvula HOM05D001338 ORTHO05D001239 2.0e-08 63.2 73 45.2
PSO017G2034 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-08 62.8 148 29.7
PSO017G5137 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-08 62.8 76 47.4
CARHR290850 Cardamine hirsuta HOM05D001338 ORTHO05D001239 3.4e-08 62.4 65 50.8
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-08 62.4 93 40.9
Gorai.010G072400 Gossypium raimondii HOM05D001338 ORTHO05D001239 4.4e-08 62.0 116 37.9
Oeu011673.1 Olea europaea HOM05D001338 ORTHO05D001239 4.4e-08 62.0 78 41.0
SpUn1024_0010 Schrenkiella parvula HOM05D001338 ORTHO05D001239 5.8e-08 61.6 61 52.5
PSO386G0185 Papaver somniferum HOM05D001338 ORTHO05D001239 7.6e-08 61.2 67 43.3
PSO339G2135 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-07 60.5 97 34.0
PSO801G0833 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-07 60.1 60 46.7
AT2G06500 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 2.2e-07 59.7 55 56.4
CiPaw.11G014600 Carya illinoinensis HOM05D001338 ORTHO05D001239 6.4e-07 58.2 102 43.1
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 8.4e-07 57.8 42 57.1
PSO478G0924 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-06 57.4 55 47.3
PSO063G6596 Papaver somniferum HOM05D001338 ORTHO05D001239 3.2e-06 55.8 47 51.1
PSO210G1168 Papaver somniferum HOM05D001338 ORTHO05D001239 3.2e-06 55.8 88 34.1
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 3.2e-06 55.8 59 52.5
Oeu052067.1 Olea europaea HOM05D001338 ORTHO05D001239 4.2e-06 55.5 47 59.6
Thecc.05G058200 Theobroma cacao HOM05D001338 ORTHO05D001239 4.2e-06 55.5 35 74.3
Oeu037760.1 Olea europaea HOM05D001338 ORTHO05D001239 7.1e-06 54.7 46 56.5


User provided reference genes

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