Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g030260.2 Solanum lycopersicum HOM05D000009 ORTHO05D004635 4.1e-83 311.2 144 100.0
PGSC0003DMG400012918 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.8e-26 120.9 79 72.2
Peaxi162Scf00818g10014 Petunia axillaris HOM05D000009 ORTHO05D000008 5.2e-22 108.2 79 64.6
Cc03_g11730 Coffea canephora HOM05D000009 ORTHO05D000008 2.7e-10 69.3 61 54.1
Cc00_g19750 Coffea canephora HOM05D000009 ORTHO05D000008 3.5e-10 68.9 61 55.7
Cc03_g11720 Coffea canephora HOM05D000009 ORTHO05D000008 3.5e-10 68.9 61 55.7
PGSC0003DMG400025683 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.5e-10 68.9 64 48.4
Cc03_g12790 Coffea canephora HOM05D000009 ORTHO05D000008 6.0e-10 68.2 61 54.1
Cc03_g14880 Coffea canephora HOM05D000009 ORTHO05D004702 1.0e-09 67.4 64 48.4
Cc03_g12690 Coffea canephora HOM05D000009 ORTHO05D000008 1.8e-09 66.6 61 54.1
Cc03_g12700 Coffea canephora HOM05D000009 ORTHO05D000008 1.8e-09 66.6 61 52.5
Cc03_g11800 Coffea canephora HOM05D000009 ORTHO05D000008 2.3e-09 66.2 61 52.5
Cc03_g12710 Coffea canephora HOM05D000009 ORTHO05D000008 2.3e-09 66.2 61 50.8
Cc03_g13940 Coffea canephora HOM05D000009 ORTHO05D004635 2.3e-09 66.2 61 54.1
Dinv30357 Davidia involucrata HOM05D000009 ORTHO05D004635 2.3e-09 66.2 93 45.2
Cc03_g14680 Coffea canephora HOM05D000009 ORTHO05D000008 3.0e-09 65.9 71 49.3
PGSC0003DMG401010943 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.0e-09 65.9 75 45.3
PGSC0003DMG400019418 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.9e-09 65.5 62 50.0
Lj6P227T12 Lonicera japonica HOM05D000009 ORTHO05D004635 5.1e-09 65.1 59 54.2
Lj6P232T12 Lonicera japonica HOM05D000009 ORTHO05D004635 5.1e-09 65.1 59 54.2
Cc02_g32490 Coffea canephora HOM05D000009 ORTHO05D000008 6.7e-09 64.7 59 47.5
Dinv00130 Davidia involucrata HOM05D000009 ORTHO05D000008 6.7e-09 64.7 68 54.4
PGSC0003DMG400021779 Solanum tuberosum HOM05D000009 ORTHO05D000008 6.7e-09 64.7 64 45.3
Cc03_g11840 Coffea canephora HOM05D000009 ORTHO05D000008 8.7e-09 64.3 61 52.5
Sopen10g034900 Solanum pennellii HOM05D000009 ORTHO05D000008 8.7e-09 64.3 62 50.0
PGSC0003DMG402004423 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.1e-08 63.9 89 37.1
Cc03_g12800 Coffea canephora HOM05D000009 ORTHO05D000008 1.9e-08 63.2 61 50.8
Cc07_g21270 Coffea canephora HOM05D000009 ORTHO05D000008 1.9e-08 63.2 57 52.6
Oeu003291.4 Olea europaea HOM05D000009 ORTHO05D000008 1.9e-08 63.2 62 51.6
Cc03_g12840 Coffea canephora HOM05D000009 ORTHO05D000008 2.5e-08 62.8 61 50.8
Cc03_g14850 Coffea canephora HOM05D000009 ORTHO05D000008 2.5e-08 62.8 64 48.4
Dinv18705 Davidia involucrata HOM05D000009 ORTHO05D004635 2.5e-08 62.8 89 42.7
PGSC0003DMG400008596 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.3e-08 62.4 64 48.4
Cc03_g12820 Coffea canephora HOM05D000009 ORTHO05D000008 4.3e-08 62.0 57 52.6
Solyc10g054380.3 Solanum lycopersicum HOM05D000722 ORTHO05D004635 4.3e-08 62.0 64 45.3
Cc01_g03240 Coffea canephora HOM05D000009 ORTHO05D000008 7.4e-08 61.2 64 45.3
Oeu035780.1 Olea europaea HOM05D000009 ORTHO05D000008 7.4e-08 61.2 70 48.6
PGSC0003DMG400026666 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.4e-08 61.2 75 42.7
Dinv01523 Davidia involucrata HOM05D000009 ORTHO05D004635 9.6e-08 60.8 54 57.4
Dinv30356 Davidia involucrata HOM05D000009 ORTHO05D004635 9.6e-08 60.8 68 47.1
Lj6C58T12 Lonicera japonica HOM05D000009 ORTHO05D004635 9.6e-08 60.8 59 45.8
Oeu026833.1 Olea europaea HOM05D000009 ORTHO05D004635 9.6e-08 60.8 62 51.6
Oeu027776.1 Olea europaea HOM05D000009 ORTHO05D000008 9.6e-08 60.8 54 53.7
Oeu038941.1 Olea europaea HOM05D000009 ORTHO05D000008 9.6e-08 60.8 54 55.6
Cc00_g24870 Coffea canephora HOM05D000009 ORTHO05D000008 1.3e-07 60.5 60 50.0
Cc03_g10470 Coffea canephora HOM05D000009 ORTHO05D000008 1.3e-07 60.5 77 39.0
Dinv10777 Davidia involucrata HOM05D000009 ORTHO05D004635 1.3e-07 60.5 68 47.1
Solyc10g085460.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.3e-07 60.5 62 48.4
Sopen10g024430 Solanum pennellii HOM05D000009 ORTHO05D000008 1.3e-07 60.5 64 46.9
PGSC0003DMG400008394 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.6e-07 60.1 64 45.3
PGSC0003DMG400011108 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.6e-07 60.1 99 37.4
Cc00_g34120 Coffea canephora HOM05D000009 ORTHO05D004635 2.1e-07 59.7 61 49.2
Cc03_g15860 Coffea canephora HOM05D000009 ORTHO05D000008 2.1e-07 59.7 61 49.2
Lsat_1_v5_gn_2_27301 Lactuca sativa HOM05D000009 ORTHO05D000008 2.1e-07 59.7 57 45.6
Nitab4.5_0000381g0040 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.8e-07 59.3 61 47.5
Nitab4.5_0008402g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.8e-07 59.3 64 45.3
Dinv10784 Davidia involucrata HOM05D000009 ORTHO05D004635 3.7e-07 58.9 59 50.8
Cc00_g27030 Coffea canephora HOM05D000009 ORTHO05D000008 4.8e-07 58.5 89 44.9
PGSC0003DMG400011116 Solanum tuberosum HOM05D000009 ORTHO05D004635 4.8e-07 58.5 99 38.4
Cc03_g12670 Coffea canephora HOM05D000009 ORTHO05D000008 6.2e-07 58.2 61 49.2
Dinv18709 Davidia involucrata HOM05D000009 ORTHO05D004635 6.2e-07 58.2 59 50.8
Lj6A225T19 Lonicera japonica HOM05D000009 ORTHO05D004635 6.2e-07 58.2 60 41.7
Lsat_1_v5_gn_2_13981 Lactuca sativa HOM05D000009 ORTHO05D000008 8.1e-07 57.8 76 34.2
PGSC0003DMG400011045 Solanum tuberosum HOM05D000009 ORTHO05D000008 8.1e-07 57.8 64 42.2
Hma1.2p1_1404F.1_g281250 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.1e-06 57.4 59 47.5
Lj6C244T2 Lonicera japonica HOM05D000009 ORTHO05D004635 1.1e-06 57.4 58 43.1
Nitab4.5_0000381g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.1e-06 57.4 64 40.6
Dinv18723 Davidia involucrata HOM05D000009 ORTHO05D004635 1.4e-06 57.0 59 50.8
Oeu053821.1 Olea europaea HOM05D000009 ORTHO05D000008 1.4e-06 57.0 59 50.8
QL05p063857 Quercus lobata HOM05D000009 ORTHO05D000008 1.4e-06 57.0 60 46.7
SalBow3G0040 Salvia bowleyana HOM05D000009 ORTHO05D000008 1.4e-06 57.0 59 44.1
Sopen10g006010 Solanum pennellii HOM05D000009 ORTHO05D000008 1.8e-06 56.6 62 43.5
PGSC0003DMG402011117 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.8e-06 56.6 62 45.2
Cc00_g12030 Coffea canephora HOM05D000009 ORTHO05D000008 2.4e-06 56.2 107 32.7
Lj9C183T2 Lonicera japonica HOM05D000009 ORTHO05D004635 2.4e-06 56.2 58 41.4
SalBow3G1243 Salvia bowleyana HOM05D000009 ORTHO05D000008 2.4e-06 56.2 59 47.5
PGSC0003DMG400028001 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.4e-06 56.2 64 42.2
PGSC0003DMG403010943 Solanum tuberosum HOM05D000009 ORTHO05D004635 2.4e-06 56.2 64 42.2
Cc00_g27310 Coffea canephora HOM05D000009 ORTHO05D000008 3.1e-06 55.8 62 48.4
Cc00_g29310 Coffea canephora HOM05D000009 ORTHO05D004635 3.1e-06 55.8 62 46.8
Dinv22080 Davidia involucrata HOM05D000009 ORTHO05D000008 3.1e-06 55.8 53 47.2
Lsat_1_v5_gn_4_138080 Lactuca sativa HOM05D000009 ORTHO05D000008 3.1e-06 55.8 74 36.5
SalBow3G0497 Salvia bowleyana HOM05D000009 ORTHO05D000008 3.1e-06 55.8 59 42.4
Cc01_g05240 Coffea canephora HOM05D000009 ORTHO05D000008 4.0e-06 55.5 62 45.2
Cc03_g09340 Coffea canephora HOM05D000009 ORTHO05D000008 4.0e-06 55.5 89 39.3
Dinv10782 Davidia involucrata HOM05D000009 ORTHO05D004635 4.0e-06 55.5 50 52.0
Lsat_1_v5_gn_2_28280 Lactuca sativa HOM05D000009 ORTHO05D004635 4.0e-06 55.5 57 42.1
Lsat_1_v5_gn_2_30621 Lactuca sativa HOM05D000009 ORTHO05D000008 4.0e-06 55.5 63 39.7
Nitab4.5_0008387g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.0e-06 55.5 61 45.9
Lj6P245T4 Lonicera japonica HOM05D000009 ORTHO05D004635 5.3e-06 55.1 58 43.1
SalBow3G1349 Salvia bowleyana HOM05D000009 ORTHO05D000008 5.3e-06 55.1 59 42.4
SalBow3G2431 Salvia bowleyana HOM05D000009 ORTHO05D000008 5.3e-06 55.1 59 42.4
Lj6A197T30 Lonicera japonica HOM05D000009 ORTHO05D004635 6.9e-06 54.7 58 39.7
Lj6C186T0 Lonicera japonica HOM05D000009 ORTHO05D004635 6.9e-06 54.7 58 39.7
Lj6C243T2 Lonicera japonica HOM05D000009 ORTHO05D004635 6.9e-06 54.7 58 39.7
SalBow3G0512 Salvia bowleyana HOM05D000009 ORTHO05D000008 6.9e-06 54.7 59 42.4
Lj6C262T0 Lonicera japonica HOM05D000009 ORTHO05D004635 9.0e-06 54.3 60 40.0
PGSC0003DMG401004423 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.0e-06 54.3 61 42.6


User provided reference genes

Program Settings