Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g030220.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 3.7e-34 149.8 165 100.0
Solyc01g005880.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 1.7e-23 114.4 63 90.5
Solyc03g082770.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 9.5e-22 108.6 66 84.8
Sopen01g001890 Solanum pennellii HOM05D000001 ORTHO05D010330 9.5e-22 108.6 63 85.7
PGSC0003DMG400032222 Solanum tuberosum HOM05D000001 ORTHO05D010330 9.8e-19 98.6 72 75.0
Sopen03g022520 Solanum pennellii HOM05D000001 ORTHO05D010330 8.3e-18 95.5 61 82.0
PGSC0003DMG400032223 Solanum tuberosum HOM05D000001 ORTHO05D010330 5.4e-17 92.8 66 75.8
PGSC0003DMG400031398 Solanum tuberosum HOM05D000001 ORTHO05D010330 1.6e-16 91.3 51 90.2
Solyc01g014830.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 3.1e-12 77.0 79 70.9
CAN.G158.20 Capsicum annuum HOM05D000001 ORTHO05D010330 1.2e-08 65.1 57 66.7
Nitab4.5_0002279g0110 Nicotiana tabacum HOM05D000001 ORTHO05D010330 2.0e-08 64.3 62 59.7
Nitab4.5_0001059g0250 Nicotiana tabacum HOM05D000001 ORTHO05D010330 4.6e-08 63.2 79 53.2
CAN.G606.45 Capsicum annuum HOM05D000001 ORTHO05D010330 7.8e-08 62.4 85 50.6
Nitab4.5_0005441g0070 Nicotiana tabacum HOM05D000001 ORTHO05D010330 7.8e-08 62.4 113 53.1
Nitab4.5_0005729g0100 Nicotiana tabacum HOM05D000001 ORTHO05D006702 7.8e-08 62.4 90 50.0
Nitab4.5_0009733g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000003 7.8e-08 62.4 88 50.0
CAN.G158.19 Capsicum annuum HOM05D000001 ORTHO05D010330 1.3e-07 61.6 64 64.1
Sopen05g030810 Solanum pennellii HOM05D000001 ORTHO05D010330 1.7e-07 61.2 58 62.1
Peaxi162Scf00117g00178 Petunia axillaris HOM05D000001 ORTHO05D010330 2.3e-07 60.8 98 46.9
Solyc03g082790.4 Solanum lycopersicum HOM05D000001 ORTHO05D010330 3.0e-07 60.5 46 73.9
Sopen03g022540 Solanum pennellii HOM05D000001 ORTHO05D010330 3.0e-07 60.5 46 73.9
Nitab4.5_0001059g0200 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.9e-07 60.1 62 61.3
Sopen01g001860 Solanum pennellii HOM05D000001 ORTHO05D010330 5.0e-07 59.7 46 73.9
PGSC0003DMG400011652 Solanum tuberosum HOM05D000001 ORTHO05D395843 5.0e-07 59.7 44 72.7
CAN.G203.45 Capsicum annuum HOM05D000001 ORTHO05D010330 8.6e-07 58.9 54 61.1
CAN.G203.46 Capsicum annuum HOM05D000001 ORTHO05D010330 8.6e-07 58.9 51 62.7
Peaxi162Scf00282g00132 Petunia axillaris HOM05D000001 ORTHO05D000003 8.6e-07 58.9 94 44.7
Solyc01g005850.2 Solanum lycopersicum HOM05D000001 ORTHO05D010330 1.5e-06 58.2 48 70.8
Sopen01g001850 Solanum pennellii HOM05D000001 ORTHO05D010330 1.5e-06 58.2 48 70.8
CAN.G134.127 Capsicum annuum HOM05D000001 ORTHO05D010330 1.9e-06 57.8 79 51.9
Nitab4.5_0003074g0010 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.9e-06 57.8 73 57.5
Nitab4.5_0007486g0060 Nicotiana tabacum HOM05D000001 ORTHO05D010330 2.5e-06 57.4 79 51.9
CAN.G134.130 Capsicum annuum HOM05D000001 ORTHO05D010330 3.3e-06 57.0 85 49.4
Sopen01g049480 Solanum pennellii HOM05D000001 ORTHO05D010330 3.3e-06 57.0 87 46.0
Peaxi162Scf00643g00059 Petunia axillaris HOM05D000001 ORTHO05D010330 4.3e-06 56.6 65 52.3
Nitab4.5_0001059g0230 Nicotiana tabacum HOM05D000001 ORTHO05D010330 5.6e-06 56.2 77 48.1
Nitab4.5_0003799g0040 Nicotiana tabacum HOM05D000001 ORTHO05D010330 7.3e-06 55.8 43 72.1
Peaxi162Scf00282g00035 Petunia axillaris HOM05D000001 ORTHO05D010330 9.5e-06 55.5 69 50.7


User provided reference genes

Program Settings